FFCP PHASE1:Hg19::chr6:53794788..53794806,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=90523|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=21355|TSSclassifier=S|UniProt=D6R9R6|association_with_transcript=8bp_to_ENST00000505762_5end|coexpression_cluster_id=C683|description=CAGE_peak_12_at_MLIP_5end|id=chr6:53794788..53794806,+|ontology_enrichment_celltype=CL:0002159!1.83e-15!13;CL:0002621!1.71e-11!3;CL:0000622!2.91e-11!5;CL:0000154!2.18e-09!6;CL:0000317!2.69e-08!2;CL:1000448!2.69e-08!2;CL:0002308!2.69e-08!2;CL:0002140!2.69e-08!2;CL:0001014!3.32e-08!2;CL:0001016!3.32e-08!2;CL:0000575!3.82e-08!2;CL:0002076!4.06e-07!43;CL:0000362!7.85e-07!8|ontology_enrichment_celltype_v019=CL:0000317;1.63e-25;2!CL:1000448;1.63e-25;2!CL:0002308;1.63e-25;2!CL:0002140;1.63e-25;2!CL:0002621;2.29e-17;3!CL:0000622;8.29e-11;5!CL:0000154;3.71e-09;6!CL:0002159;1.68e-08;14!CL:0001014;1.12e-07;2!CL:0001016;1.12e-07;2!CL:0000575;1.81e-07;2|ontology_enrichment_celltype_v019_2=CL:0000317,2.10e-25,2;CL:1000448,2.10e-25,2;CL:0002308,2.10e-25,2;CL:0002140,2.10e-25,2;CL:0002621,2.50e-17,3;CL:0000622,9.16e-11,5;CL:0000154,4.03e-09,6;CL:0002159,1.74e-08,14;CL:0001014,1.28e-07,2;CL:0001016,1.28e-07,2;CL:0000575,1.75e-07,2|ontology_enrichment_development_v019=UBERON:0009143;4.53e-14;1!UBERON:0006298;1.18e-13;1!UBERON:0008814;1.12e-07;2!UBERON:0010056;1.12e-07;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3151;4.53e-14;1!DOID:3149;4.53e-14;1!DOID:3451;1.12e-07;2!DOID:4159;1.12e-07;2!DOID:0060122;1.12e-07;2|ontology_enrichment_disease_v019_2=DOID:3151,4.53e-14,1;DOID:3149,4.53e-14,1;DOID:3451,1.12e-07,2;DOID:4159,1.12e-07,2;DOID:0060122,1.12e-07,2|ontology_enrichment_uberon=UBERON:0000166!6.60e-18!21;UBERON:0000165!3.80e-15!28;UBERON:0000930!3.80e-15!28;UBERON:0001044!5.01e-14!6;UBERON:0003293!5.01e-14!6;UBERON:0003294!5.01e-14!6;UBERON:0010047!5.01e-14!6;UBERON:0000167!5.01e-14!6;UBERON:0000161!1.06e-13!35;UBERON:0003102!4.04e-13!95;UBERON:0001949!1.71e-11!3;UBERON:0000078!4.57e-11!18;UBERON:0001004!5.90e-11!72;UBERON:0001444!7.22e-11!48;UBERON:0007023!1.03e-09!115;UBERON:0002419!2.69e-08!2;UBERON:0007771!2.69e-08!2;UBERON:0003297!2.69e-08!2;UBERON:0001821!2.69e-08!2;UBERON:0003487!2.69e-08!2;UBERON:0001820!2.69e-08!2;UBERON:0005089!2.69e-08!2;UBERON:0005088!2.69e-08!2;UBERON:0003408!2.79e-08!10;UBERON:0001829!4.09e-08!2;UBERON:0003127!5.59e-08!2;UBERON:0000341!7.36e-08!2|ontology_enrichment_uberon_v019=UBERON:0002419;1.63e-25;2!UBERON:0007771;1.63e-25;2!UBERON:0003297;1.63e-25;2!UBERON:0001821;1.63e-25;2!UBERON:0003487;1.63e-25;2!UBERON:0001820;1.63e-25;2!UBERON:0001949;2.29e-17;3!UBERON:0005795;3.08e-14;1!UBERON:0002372;4.53e-14;1!UBERON:0001961;4.53e-14;1!UBERON:0001744;4.53e-14;1!UBERON:0001042;4.53e-14;1!UBERON:0001735;4.53e-14;1!UBERON:0001736;1.18e-13;1!UBERON:0000165;4.33e-11;28!UBERON:0000161;1.02e-10;19!UBERON:0000166;1.02e-10;19!UBERON:0000002;3.71e-09;6!UBERON:0001560;3.71e-09;6!UBERON:0003929;5.66e-08;7!UBERON:0006562;1.12e-07;2!UBERON:0007811;1.30e-07;52!UBERON:0000341;1.81e-07;2!UBERON:0001829;1.81e-07;2!UBERON:0000153;1.99e-07;54!UBERON:0003350;4.41e-07;8!UBERON:0001828;4.41e-07;8|ontology_enrichment_uberon_v019_2=UBERON:0002419,2.10e-25,2;UBERON:0007771,2.10e-25,2;UBERON:0003297,2.10e-25,2;UBERON:0001821,2.10e-25,2;UBERON:0003487,2.10e-25,2;UBERON:0001820,2.10e-25,2;UBERON:0005089,2.10e-25,2;UBERON:0005088,2.10e-25,2;UBERON:0001949,2.50e-17,3;UBERON:0000166,3.63e-14,22;UBERON:0002372,5.15e-14,1;UBERON:0001961,5.15e-14,1;UBERON:0001744,5.15e-14,1;UBERON:0001735,5.15e-14,1;UBERON:0001736,7.55e-14,1;UBERON:0006298,7.55e-14,1;UBERON:0000165,9.75e-11,29;UBERON:0000930,9.75e-11,29;UBERON:0000153,3.15e-09,62;UBERON:0007811,3.15e-09,62;UBERON:0003102,3.74e-09,99;UBERON:0000002,3.86e-09,6;UBERON:0001560,3.86e-09,6;UBERON:0001444,7.76e-09,49;UBERON:0000161,1.24e-08,36;UBERON:0000033,1.10e-07,56;UBERON:0001829,1.45e-07,2;UBERON:0000341,2.40e-07,2;UBERON:0003350,4.55e-07,8;UBERON:0001828,4.55e-07,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45718115317017,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54608682530637,0.818238361772504,1.14721838155602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0.141775097242386,0,0,0,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14853107599234,1.30012049207304,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=90523 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21355 | |||
|TSSclassifier=S | |||
|UniProt=D6R9R6 | |||
|association_with_transcript=8bp_to_ENST00000505762_5end | |||
|coexpression_cluster_id=C683 | |||
|description=CAGE_peak_12_at_MLIP_5end | |||
|id=chr6:53794788..53794806,+ | |||
|ontology_enrichment_celltype=CL:0002159!1.83e-15!13;CL:0002621!1.71e-11!3;CL:0000622!2.91e-11!5;CL:0000154!2.18e-09!6;CL:0000317!2.69e-08!2;CL:1000448!2.69e-08!2;CL:0002308!2.69e-08!2;CL:0002140!2.69e-08!2;CL:0001014!3.32e-08!2;CL:0001016!3.32e-08!2;CL:0000575!3.82e-08!2;CL:0002076!4.06e-07!43;CL:0000362!7.85e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000317;1.63e-25;2!CL:1000448;1.63e-25;2!CL:0002308;1.63e-25;2!CL:0002140;1.63e-25;2!CL:0002621;2.29e-17;3!CL:0000622;8.29e-11;5!CL:0000154;3.71e-09;6!CL:0002159;1.68e-08;14!CL:0001014;1.12e-07;2!CL:0001016;1.12e-07;2!CL:0000575;1.81e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000317,2.10e-25,2;CL:1000448,2.10e-25,2;CL:0002308,2.10e-25,2;CL:0002140,2.10e-25,2;CL:0002621,2.50e-17,3;CL:0000622,9.16e-11,5;CL:0000154,4.03e-09,6;CL:0002159,1.74e-08,14;CL:0001014,1.28e-07,2;CL:0001016,1.28e-07,2;CL:0000575,1.75e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0009143;4.53e-14;1!UBERON:0006298;1.18e-13;1!UBERON:0008814;1.12e-07;2!UBERON:0010056;1.12e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;4.53e-14;1!DOID:3149;4.53e-14;1!DOID:3451;1.12e-07;2!DOID:4159;1.12e-07;2!DOID:0060122;1.12e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,4.53e-14,1;DOID:3149,4.53e-14,1;DOID:3451,1.12e-07,2;DOID:4159,1.12e-07,2;DOID:0060122,1.12e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000166!6.60e-18!21;UBERON:0000165!3.80e-15!28;UBERON:0000930!3.80e-15!28;UBERON:0001044!5.01e-14!6;UBERON:0003293!5.01e-14!6;UBERON:0003294!5.01e-14!6;UBERON:0010047!5.01e-14!6;UBERON:0000167!5.01e-14!6;UBERON:0000161!1.06e-13!35;UBERON:0003102!4.04e-13!95;UBERON:0001949!1.71e-11!3;UBERON:0000078!4.57e-11!18;UBERON:0001004!5.90e-11!72;UBERON:0001444!7.22e-11!48;UBERON:0007023!1.03e-09!115;UBERON:0002419!2.69e-08!2;UBERON:0007771!2.69e-08!2;UBERON:0003297!2.69e-08!2;UBERON:0001821!2.69e-08!2;UBERON:0003487!2.69e-08!2;UBERON:0001820!2.69e-08!2;UBERON:0005089!2.69e-08!2;UBERON:0005088!2.69e-08!2;UBERON:0003408!2.79e-08!10;UBERON:0001829!4.09e-08!2;UBERON:0003127!5.59e-08!2;UBERON:0000341!7.36e-08!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;1.63e-25;2!UBERON:0007771;1.63e-25;2!UBERON:0003297;1.63e-25;2!UBERON:0001821;1.63e-25;2!UBERON:0003487;1.63e-25;2!UBERON:0001820;1.63e-25;2!UBERON:0001949;2.29e-17;3!UBERON:0005795;3.08e-14;1!UBERON:0002372;4.53e-14;1!UBERON:0001961;4.53e-14;1!UBERON:0001744;4.53e-14;1!UBERON:0001042;4.53e-14;1!UBERON:0001735;4.53e-14;1!UBERON:0001736;1.18e-13;1!UBERON:0000165;4.33e-11;28!UBERON:0000161;1.02e-10;19!UBERON:0000166;1.02e-10;19!UBERON:0000002;3.71e-09;6!UBERON:0001560;3.71e-09;6!UBERON:0003929;5.66e-08;7!UBERON:0006562;1.12e-07;2!UBERON:0007811;1.30e-07;52!UBERON:0000341;1.81e-07;2!UBERON:0001829;1.81e-07;2!UBERON:0000153;1.99e-07;54!UBERON:0003350;4.41e-07;8!UBERON:0001828;4.41e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,2.10e-25,2;UBERON:0007771,2.10e-25,2;UBERON:0003297,2.10e-25,2;UBERON:0001821,2.10e-25,2;UBERON:0003487,2.10e-25,2;UBERON:0001820,2.10e-25,2;UBERON:0005089,2.10e-25,2;UBERON:0005088,2.10e-25,2;UBERON:0001949,2.50e-17,3;UBERON:0000166,3.63e-14,22;UBERON:0002372,5.15e-14,1;UBERON:0001961,5.15e-14,1;UBERON:0001744,5.15e-14,1;UBERON:0001735,5.15e-14,1;UBERON:0001736,7.55e-14,1;UBERON:0006298,7.55e-14,1;UBERON:0000165,9.75e-11,29;UBERON:0000930,9.75e-11,29;UBERON:0000153,3.15e-09,62;UBERON:0007811,3.15e-09,62;UBERON:0003102,3.74e-09,99;UBERON:0000002,3.86e-09,6;UBERON:0001560,3.86e-09,6;UBERON:0001444,7.76e-09,49;UBERON:0000161,1.24e-08,36;UBERON:0000033,1.10e-07,56;UBERON:0001829,1.45e-07,2;UBERON:0000341,2.40e-07,2;UBERON:0003350,4.55e-07,8;UBERON:0001828,4.55e-07,8 | |||
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|short_description=p12@MLIP | |||
}} |
Revision as of 21:25, 13 September 2013
Short description: | p12@MLIP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_MLIP_5end |
Coexpression cluster: | C683_esophagus_tongue_tonsil_Corneal_cervical_Esophageal_throat |
Association with transcript: | 8bp_to_ENST00000505762_5end |
EntrezGene: | MLIP |
HGNC: | 21355 |
UniProt: | D6R9R6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sebum secreting cell | 2.10e-25 | 2 |
epithelial cell of sweat gland | 2.10e-25 | 2 |
epithelial cell of skin gland | 2.10e-25 | 2 |
acinar cell of sebaceous gland | 2.10e-25 | 2 |
gingival epithelial cell | 2.50e-17 | 3 |
acinar cell | 9.16e-11 | 5 |
protein secreting cell | 4.03e-09 | 6 |
general ecto-epithelial cell | 1.74e-08 | 14 |
CD1a-positive Langerhans cell | 1.28e-07 | 2 |
immature CD1a-positive Langerhans cell | 1.28e-07 | 2 |
corneal epithelial cell | 1.75e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
skin gland | 2.10e-25 | 2 |
epidermis gland | 2.10e-25 | 2 |
gland of integumental system | 2.10e-25 | 2 |
sebaceous gland | 2.10e-25 | 2 |
skin sebaceous gland | 2.10e-25 | 2 |
sweat gland | 2.10e-25 | 2 |
sweat gland placode | 2.10e-25 | 2 |
sebaceous gland placode | 2.10e-25 | 2 |
gingival epithelium | 2.50e-17 | 3 |
oral opening | 3.63e-14 | 22 |
tonsil | 5.15e-14 | 1 |
mucosa-associated lymphoid tissue | 5.15e-14 | 1 |
lymphoid tissue | 5.15e-14 | 1 |
tonsillar ring | 5.15e-14 | 1 |
submandibular gland | 7.55e-14 | 1 |
submandibular gland primordium | 7.55e-14 | 1 |
mouth | 9.75e-11 | 29 |
stomodeum | 9.75e-11 | 29 |
anterior region of body | 3.15e-09 | 62 |
craniocervical region | 3.15e-09 | 62 |
surface structure | 3.74e-09 | 99 |
uterine cervix | 3.86e-09 | 6 |
neck of organ | 3.86e-09 | 6 |
subdivision of head | 7.76e-09 | 49 |
orifice | 1.24e-08 | 36 |
head | 1.10e-07 | 56 |
major salivary gland | 1.45e-07 | 2 |
throat | 2.40e-07 | 2 |
epithelium of mucosa | 4.55e-07 | 8 |
gingiva | 4.55e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 4.53e-14 | 1 |
keratoacanthoma | 4.53e-14 | 1 |
skin carcinoma | 1.12e-07 | 2 |
skin cancer | 1.12e-07 | 2 |
integumentary system cancer | 1.12e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.