FFCP PHASE1:Hg19::chr6:52367939..52367946,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:52367939..52367946,-|id=chr6:52367939..52367946,-|ontology_enrichment_celltype=CL:0000055!2.21e-13!180;CL:0000057!3.93e-07!75|ontology_enrichment_celltype_v019=CL:0002581;2.93e-23;1!CL:0002591;2.93e-23;1!CL:0000054;2.45e-12;2!CL:0002262;2.45e-12;2!CL:1000398;2.45e-12;2!CL:0000137;2.45e-12;2!CL:0000092;2.45e-12;2!CL:0002521;1.17e-08;3!CL:0000515;1.17e-08;3!CL:0000056;8.37e-07;4!CL:0000306;8.37e-07;4!CL:0002222;8.37e-07;4!CL:0002224;8.37e-07;4|ontology_enrichment_celltype_v019_2=CL:0002581,1.34e-23,1;CL:0002591,5.13e-23,1;CL:0002262,2.07e-12,2;CL:1000398,2.07e-12,2;CL:0000054,2.90e-12,2;CL:0000137,2.90e-12,2;CL:0000092,2.90e-12,2;CL:0002521,1.12e-08,3;CL:0000306,7.27e-07,4;CL:0002222,7.27e-07,4;CL:0002224,7.27e-07,4|ontology_enrichment_development_v019=CL:0000515;8.37e-07;4|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:200;2.45e-12;2!DOID:4305;2.45e-12;2|ontology_enrichment_disease_v019_2=DOID:200,2.90e-12,2;DOID:4305,2.90e-12,2|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0001281;2.45e-12;2!UBERON:0003497;2.45e-12;2!UBERON:0003909;2.45e-12;2!UBERON:0000078;2.45e-12;2!UBERON:0003835;2.45e-12;2!UBERON:0002012;2.45e-12;2!UBERON:0005406;2.45e-12;2!UBERON:0008886;2.45e-12;2!UBERON:0002190;1.17e-08;3!UBERON:0001280;1.17e-08;3!UBERON:0004647;1.17e-08;3!UBERON:0001013;3.04e-07;14!UBERON:0010077;8.37e-07;4!UBERON:0005389;8.37e-07;4!UBERON:0000484;8.37e-07;4!UBERON:0000965;8.37e-07;4!UBERON:0001803;8.37e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0005406,1.65e-12,2;UBERON:0001281,2.07e-12,2;UBERON:0003497,2.07e-12,2;UBERON:0003909,2.07e-12,2;UBERON:0003835,2.07e-12,2;UBERON:0000078,3.24e-12,2;UBERON:0007497,3.24e-12,2;UBERON:0003643,3.24e-12,2;UBERON:0003504,3.24e-12,2;UBERON:0003469,3.24e-12,2;UBERON:0003496,3.24e-12,2;UBERON:0002012,3.24e-12,2;UBERON:0008886,3.24e-12,2;UBERON:0007303,3.24e-12,2;UBERON:0002061,3.24e-12,2;UBERON:0005432,3.24e-12,2;UBERON:0004363,3.24e-12,2;UBERON:0001280,1.04e-08,3;UBERON:0004647,1.04e-08,3;UBERON:0005171,1.04e-08,3;UBERON:0002190,1.12e-08,3;UBERON:0004145,1.40e-08,3;UBERON:0001013,2.68e-07,14;UBERON:0010077,7.27e-07,4;UBERON:0005389,7.27e-07,4;UBERON:0000484,7.27e-07,4;UBERON:0002546,7.27e-07,4;UBERON:0000965,7.27e-07,4;UBERON:0001803,7.27e-07,4;UBERON:0003073,7.27e-07,4;UBERON:0005426,7.27e-07,4|phase1_expression=0,0.214100523890983,0,0,0,0,0,1.26343974685366,0,0,0,0,0,0.123766352960047,0.994192127183747,0.672325146451775,1.20538905604795,0,0,0.246242116153576,0.204000691244253,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.434539556882471,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0,0,0,0,0.402829317109147,0,0,0,0,0.267899184852239,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0.354668382198357,0,0,0,0,0.269421344139376,0.326923806226917,0,0,0,0.312160076830321,0,0,0.23486899728753,0.161872944368132,0.280901613404497,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0,0,0.358779271377724,0.213557388818567,0,0.600182192168805,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0.122988438543114,0,0,0,0.100528972411631,0,0.325808305310325,0,1.44331342025273,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0.142977993658148,0.542621605391443,0,0,0.355391948742546,0,0.301439377059586,0,0,0,0,0,0,0,0,0.579125226670317,1.02738161275192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.39015078714607,0,0.117141414992713,0,0,0,0,0.184369168541703,0,0.587403472388222,0.343143423810856,0,0,0,0,0,0,0,0,0.841980283299221,0.128139149255701,0,0.321707842287215,1.48418066444991,0.154209693802656,0.177561725313127,0,0,0.116210378459959,0,0,0,0,0.364182336013434,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0.096670718292122,0.154048617114644,0,0,0,0,0,0.0890320356467374,0,0,0,0,0.929691098594572,0,0,0.308033580176089,0,0,0,0.143124886741991,0,0,0,0,0,0,0.78494864019923,0,0,0.235624804691373,0,0,0,0,0.243713489631284,0,0.136499911407986,0,1.13008116620243,0,0,0,0,0.655894752046633,0,0,0,0.286822704408103,0,0,0,0.422215270595328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0.102268682502155,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0.179515288819544,0.108647371922008,0.31900115973192,0.0915975934018623,0.53303477601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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:52367939..52367946,- | |||
|id=chr6:52367939..52367946,- | |||
|ontology_enrichment_celltype=CL:0000055!2.21e-13!180;CL:0000057!3.93e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0002581;2.93e-23;1!CL:0002591;2.93e-23;1!CL:0000054;2.45e-12;2!CL:0002262;2.45e-12;2!CL:1000398;2.45e-12;2!CL:0000137;2.45e-12;2!CL:0000092;2.45e-12;2!CL:0002521;1.17e-08;3!CL:0000515;1.17e-08;3!CL:0000056;8.37e-07;4!CL:0000306;8.37e-07;4!CL:0002222;8.37e-07;4!CL:0002224;8.37e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002581,1.34e-23,1;CL:0002591,5.13e-23,1;CL:0002262,2.07e-12,2;CL:1000398,2.07e-12,2;CL:0000054,2.90e-12,2;CL:0000137,2.90e-12,2;CL:0000092,2.90e-12,2;CL:0002521,1.12e-08,3;CL:0000306,7.27e-07,4;CL:0002222,7.27e-07,4;CL:0002224,7.27e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000515;8.37e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:200;2.45e-12;2!DOID:4305;2.45e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:200,2.90e-12,2;DOID:4305,2.90e-12,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001281;2.45e-12;2!UBERON:0003497;2.45e-12;2!UBERON:0003909;2.45e-12;2!UBERON:0000078;2.45e-12;2!UBERON:0003835;2.45e-12;2!UBERON:0002012;2.45e-12;2!UBERON:0005406;2.45e-12;2!UBERON:0008886;2.45e-12;2!UBERON:0002190;1.17e-08;3!UBERON:0001280;1.17e-08;3!UBERON:0004647;1.17e-08;3!UBERON:0001013;3.04e-07;14!UBERON:0010077;8.37e-07;4!UBERON:0005389;8.37e-07;4!UBERON:0000484;8.37e-07;4!UBERON:0000965;8.37e-07;4!UBERON:0001803;8.37e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005406,1.65e-12,2;UBERON:0001281,2.07e-12,2;UBERON:0003497,2.07e-12,2;UBERON:0003909,2.07e-12,2;UBERON:0003835,2.07e-12,2;UBERON:0000078,3.24e-12,2;UBERON:0007497,3.24e-12,2;UBERON:0003643,3.24e-12,2;UBERON:0003504,3.24e-12,2;UBERON:0003469,3.24e-12,2;UBERON:0003496,3.24e-12,2;UBERON:0002012,3.24e-12,2;UBERON:0008886,3.24e-12,2;UBERON:0007303,3.24e-12,2;UBERON:0002061,3.24e-12,2;UBERON:0005432,3.24e-12,2;UBERON:0004363,3.24e-12,2;UBERON:0001280,1.04e-08,3;UBERON:0004647,1.04e-08,3;UBERON:0005171,1.04e-08,3;UBERON:0002190,1.12e-08,3;UBERON:0004145,1.40e-08,3;UBERON:0001013,2.68e-07,14;UBERON:0010077,7.27e-07,4;UBERON:0005389,7.27e-07,4;UBERON:0000484,7.27e-07,4;UBERON:0002546,7.27e-07,4;UBERON:0000965,7.27e-07,4;UBERON:0001803,7.27e-07,4;UBERON:0003073,7.27e-07,4;UBERON:0005426,7.27e-07,4 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,1.26343974685366,0,0,0,0,0,0.123766352960047,0.994192127183747,0.672325146451775,1.20538905604795,0,0,0.246242116153576,0.204000691244253,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.434539556882471,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0,0,0,0,0.402829317109147,0,0,0,0,0.267899184852239,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0.354668382198357,0,0,0,0,0.269421344139376,0.326923806226917,0,0,0,0.312160076830321,0,0,0.23486899728753,0.161872944368132,0.280901613404497,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0,0,0.358779271377724,0.213557388818567,0,0.600182192168805,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0.122988438543114,0,0,0,0.100528972411631,0,0.325808305310325,0,1.44331342025273,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0.142977993658148,0.542621605391443,0,0,0.355391948742546,0,0.301439377059586,0,0,0,0,0,0,0,0,0.579125226670317,1.02738161275192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.39015078714607,0,0.117141414992713,0,0,0,0,0.184369168541703,0,0.587403472388222,0.343143423810856,0,0,0,0,0,0,0,0,0.841980283299221,0.128139149255701,0,0.321707842287215,1.48418066444991,0.154209693802656,0.177561725313127,0,0,0.116210378459959,0,0,0,0,0.364182336013434,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0.096670718292122,0.154048617114644,0,0,0,0,0,0.0890320356467374,0,0,0,0,0.929691098594572,0,0,0.308033580176089,0,0,0,0.143124886741991,0,0,0,0,0,0,0.78494864019923,0,0,0.235624804691373,0,0,0,0,0.243713489631284,0,0.136499911407986,0,1.13008116620243,0,0,0,0,0.655894752046633,0,0,0,0.286822704408103,0,0,0,0.422215270595328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0.102268682502155,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0.179515288819544,0.108647371922008,0.31900115973192,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0.0882561266915003,0,0,0,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0.209205692624666,0,0,0,0,0,0.859530882839914,0,0,0,0,0,0,0,0,0,0,0,0.164831716762333,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276697269872462,0,0,0,0,0,0,0.149254802886874,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0.385239660814607,0,0,0,0,0.244736704506468,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0.6124909547064,0,0,0,0,0,0,0,0,0,0,0,0,1.1441462864015,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0.255640214277473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0.380095503034311,0,0,0,0.250707539292375,0,0,0,0,0,0,0,0,0,0.0636471582781649,0.202117188958219,0,0,0,0,0,0,0.213454691755431,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:52367939..52367946,- | |||
}} |
Revision as of 21:22, 13 September 2013
Short description: | p@chr6:52367939..52367946, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:52367939..52367946, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal preadipocyte | 1.34e-23 | 1 |
smooth muscle cell of the pulmonary artery | 5.13e-23 | 1 |
endothelial cell of sinusoid | 2.07e-12 | 2 |
endothelial cell of hepatic sinusoid | 2.07e-12 | 2 |
bone matrix secreting cell | 2.90e-12 | 2 |
osteocyte | 2.90e-12 | 2 |
osteoclast | 2.90e-12 | 2 |
subcutaneous fat cell | 1.12e-08 | 3 |
crystallin accumulating cell | 7.27e-07 | 4 |
vertebrate lens cell | 7.27e-07 | 4 |
lens epithelial cell | 7.27e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
perirenal fat | 1.65e-12 | 2 |
hepatic sinusoid | 2.07e-12 | 2 |
abdomen blood vessel | 2.07e-12 | 2 |
sinusoid | 2.07e-12 | 2 |
abdominal segment blood vessel | 2.07e-12 | 2 |
mixed ectoderm/mesoderm/endoderm-derived structure | 3.24e-12 | 2 |
developing epithelial placode | 3.24e-12 | 2 |
respiratory system arterial blood vessel | 3.24e-12 | 2 |
respiratory system blood vessel | 3.24e-12 | 2 |
respiratory system artery | 3.24e-12 | 2 |
head blood vessel | 3.24e-12 | 2 |
pulmonary artery | 3.24e-12 | 2 |
pulmonary vascular system | 3.24e-12 | 2 |
pharyngeal vasculature | 3.24e-12 | 2 |
truncus arteriosus | 3.24e-12 | 2 |
aortic sac | 3.24e-12 | 2 |
pharyngeal arch artery | 3.24e-12 | 2 |
liver parenchyma | 1.04e-08 | 3 |
liver lobule | 1.04e-08 | 3 |
hepatic duct | 1.04e-08 | 3 |
subcutaneous adipose tissue | 1.12e-08 | 3 |
outflow tract | 1.40e-08 | 3 |
adipose tissue | 2.68e-07 | 14 |
cuboidal epithelium | 7.27e-07 | 4 |
transparent eye structure | 7.27e-07 | 4 |
simple cuboidal epithelium | 7.27e-07 | 4 |
cranial placode | 7.27e-07 | 4 |
lens of camera-type eye | 7.27e-07 | 4 |
epithelium of lens | 7.27e-07 | 4 |
lens placode | 7.27e-07 | 4 |
lens vesicle | 7.27e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
giant cell tumor | 2.90e-12 | 2 |
bone giant cell tumor | 2.90e-12 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.