FFCP PHASE1:Hg19::chr6:32977332..32977343,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3111|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4936|TSSclassifier=S|UniProt=C9IZS7|association_with_transcript=0bp_to_ENST00000432150_5end|coexpression_cluster_id=C1215|description=CAGE_peak_2_at_HLA-DOA_5end|id=chr6:32977332..32977343,-|ontology_enrichment_celltype=CL:0000738!4.96e-37!140;CL:0002087!1.00e-34!119;CL:0002031!4.41e-30!124;CL:0000037!7.50e-29!172;CL:0000566!7.50e-29!172;CL:0000988!1.67e-28!182;CL:0002032!2.87e-25!165;CL:0000837!2.87e-25!165;CL:0000945!2.39e-23!24;CL:0000826!2.39e-23!24;CL:0000542!8.07e-21!53;CL:0000051!8.07e-21!53;CL:0000838!5.09e-20!52;CL:0000236!1.05e-16!14;CL:0002009!5.85e-14!65;CL:0002194!1.53e-12!63;CL:0000576!1.53e-12!63;CL:0000040!1.53e-12!63;CL:0000559!1.53e-12!63;CL:0000451!7.71e-12!10;CL:0000557!1.06e-11!71;CL:0002057!1.17e-10!42;CL:0000766!1.82e-10!76;CL:0000839!4.05e-10!70;CL:0000990!6.17e-10!8;CL:0000860!2.26e-09!45;CL:0000763!2.22e-08!112;CL:0000049!2.22e-08!112;CL:0000453!5.10e-07!5|ontology_enrichment_celltype_v019=CL:0000945;9.13e-52;24!CL:0000236;2.73e-33;13!CL:0000542;3.43e-19;53!CL:0000451;2.85e-14;10!CL:0000453;7.97e-14;5!CL:0000990;1.84e-10;8!CL:0000784;3.85e-08;3!CL:0002619;1.72e-07;3!CL:0000738;3.87e-07;136!CL:0002087;7.39e-07;104|ontology_enrichment_celltype_v019_2=CL:0000945,2.55e-51,24;CL:0000826,2.55e-51,24;CL:0000236,1.46e-35,14;CL:0000542,5.41e-28,53;CL:0000051,5.41e-28,53;CL:0000838,1.86e-26,52;CL:0000738,1.06e-23,136;CL:0000988,7.73e-22,177;CL:0000037,4.04e-20,168;CL:0002087,3.13e-19,115;CL:0002031,3.20e-18,120;CL:0002032,5.65e-17,161;CL:0000837,5.65e-17,161;CL:0000451,2.24e-14,10;CL:0000453,8.47e-14,5;CL:0000990,1.87e-10,8;CL:0000817,1.80e-08,3;CL:0000784,2.62e-08,3;CL:0002619,1.25e-07,3|ontology_enrichment_development_v019=CL:0000051;3.43e-19;53|ontology_enrichment_disease=DOID:0060058!6.87e-09!10|ontology_enrichment_disease_v019=DOID:0060058;3.50e-15;10|ontology_enrichment_disease_v019_2=DOID:0060058,3.93e-15,10|ontology_enrichment_uberon=UBERON:0007023!1.46e-25!115;UBERON:0002390!1.31e-21!102;UBERON:0003061!1.31e-21!102;UBERON:0002193!7.36e-20!112;UBERON:0000178!7.03e-12!15;UBERON:0000179!7.03e-12!15;UBERON:0000463!7.03e-12!15;UBERON:0002371!1.84e-10!80;UBERON:0002405!4.54e-09!115;UBERON:0001474!7.06e-09!86|ontology_enrichment_uberon_v019=UBERON:0000178;1.09e-13;15!UBERON:0000179;1.09e-13;15!UBERON:0000463;1.09e-13;15!UBERON:0002390;1.72e-13;32!UBERON:0004177;5.23e-12;5!UBERON:0005057;5.23e-12;5!UBERON:0002193;3.81e-08;42!UBERON:0002106;4.91e-08;3|ontology_enrichment_uberon_v019_2=UBERON:0000178,7.83e-14,15;UBERON:0000179,7.83e-14,15;UBERON:0000463,7.83e-14,15;UBERON:0002193,1.71e-10,108;UBERON:0002390,3.53e-10,98;UBERON:0003061,3.53e-10,98;UBERON:0004177,1.97e-08,7;UBERON:0005057,1.97e-08,7;UBERON:0002106,3.27e-08,3;UBERON:0004854,3.27e-08,3;UBERON:0009034,3.27e-08,3;UBERON:0002095,3.27e-08,3;UBERON:0004782,3.27e-08,3;UBERON:0003281,3.27e-08,3;UBERON:0009664,3.27e-08,3;UBERON:0002296,3.27e-08,3;UBERON:0005602,3.27e-08,3;UBERON:0001179,3.27e-08,3;UBERON:0006293,3.27e-08,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60057375499824,0,5.32873026512749,0,0.136874425072884,0.251085279189606,1.06978768047132,1.14940825229924,1.02324015707783,0.393364276848904,0.383829398097213,0.619264493264304,0,0,0,6.42977764816504,3.12772311472327,2.93600439334847,0,0.401088894940283,0.434021741431704,1.34349284543955,1.6194683300949,2.83333124397605,0.145398238779565,0.755751887377619,0,0.232429036905685,0.411167888021826,0,0.28769239232215,0.512321413058201,0.236482229888585,0,0,0,0.376484679085209,0.545812300115692,0.449446968890169,0,0.320929027076094,0.639337125799041,0,1.59570926097305,0.852449501065388,0,0.56738522469114,0,0,1.0429658368404,0.434377689410233,0.605399502633369,0,0.316462387440884,1.47878700418359,1.4882300997553,0.628975936525128,0.336985893439485,0.300353785683013,0.48217676009124,0.285012743741249,0.59675003159727,0.365328307529268,19.3595868907455,18.5687127829125,18.6796943311347,17.0692089026603,16.0158394814405,20.1163353984069,21.8144808019005,13.3567525634951,13.0918982895173,10.5702694086769,10.3213771593812,1.32171328579026,0.560508562981536,1.05353633910031,0,0,0.205601498999509,0,0.32592226663359,0,0,0.111410456885174,0,0.886135578334485,0.541607727530031,0.384273959177026,0.390178042679635,0,0,0,0,0.267540828089713,0,0,0,0.34362744548263,0,0.318565414324097,0.651083453856419,0,0,0.255973222308837,0,0,0,0.403213486449465,0,0.144824403882799,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,1.44076983047484,0,0,0.649094787309367,0.870648686496336,0.531831842075461,5.48528435902286,4.57595928624102,1.85728750664782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.265059536642971,0.348581828608555,0.10366105501537,0.252320850875628,1.09493207722749,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3111 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4936 | |||
|TSSclassifier=S | |||
|UniProt=C9IZS7 | |||
|association_with_transcript=0bp_to_ENST00000432150_5end | |||
|coexpression_cluster_id=C1215 | |||
|description=CAGE_peak_2_at_HLA-DOA_5end | |||
|id=chr6:32977332..32977343,- | |||
|ontology_enrichment_celltype=CL:0000738!4.96e-37!140;CL:0002087!1.00e-34!119;CL:0002031!4.41e-30!124;CL:0000037!7.50e-29!172;CL:0000566!7.50e-29!172;CL:0000988!1.67e-28!182;CL:0002032!2.87e-25!165;CL:0000837!2.87e-25!165;CL:0000945!2.39e-23!24;CL:0000826!2.39e-23!24;CL:0000542!8.07e-21!53;CL:0000051!8.07e-21!53;CL:0000838!5.09e-20!52;CL:0000236!1.05e-16!14;CL:0002009!5.85e-14!65;CL:0002194!1.53e-12!63;CL:0000576!1.53e-12!63;CL:0000040!1.53e-12!63;CL:0000559!1.53e-12!63;CL:0000451!7.71e-12!10;CL:0000557!1.06e-11!71;CL:0002057!1.17e-10!42;CL:0000766!1.82e-10!76;CL:0000839!4.05e-10!70;CL:0000990!6.17e-10!8;CL:0000860!2.26e-09!45;CL:0000763!2.22e-08!112;CL:0000049!2.22e-08!112;CL:0000453!5.10e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000945;9.13e-52;24!CL:0000236;2.73e-33;13!CL:0000542;3.43e-19;53!CL:0000451;2.85e-14;10!CL:0000453;7.97e-14;5!CL:0000990;1.84e-10;8!CL:0000784;3.85e-08;3!CL:0002619;1.72e-07;3!CL:0000738;3.87e-07;136!CL:0002087;7.39e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.55e-51,24;CL:0000826,2.55e-51,24;CL:0000236,1.46e-35,14;CL:0000542,5.41e-28,53;CL:0000051,5.41e-28,53;CL:0000838,1.86e-26,52;CL:0000738,1.06e-23,136;CL:0000988,7.73e-22,177;CL:0000037,4.04e-20,168;CL:0002087,3.13e-19,115;CL:0002031,3.20e-18,120;CL:0002032,5.65e-17,161;CL:0000837,5.65e-17,161;CL:0000451,2.24e-14,10;CL:0000453,8.47e-14,5;CL:0000990,1.87e-10,8;CL:0000817,1.80e-08,3;CL:0000784,2.62e-08,3;CL:0002619,1.25e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000051;3.43e-19;53 | |||
|ontology_enrichment_disease=DOID:0060058!6.87e-09!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;3.50e-15;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,3.93e-15,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.46e-25!115;UBERON:0002390!1.31e-21!102;UBERON:0003061!1.31e-21!102;UBERON:0002193!7.36e-20!112;UBERON:0000178!7.03e-12!15;UBERON:0000179!7.03e-12!15;UBERON:0000463!7.03e-12!15;UBERON:0002371!1.84e-10!80;UBERON:0002405!4.54e-09!115;UBERON:0001474!7.06e-09!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.09e-13;15!UBERON:0000179;1.09e-13;15!UBERON:0000463;1.09e-13;15!UBERON:0002390;1.72e-13;32!UBERON:0004177;5.23e-12;5!UBERON:0005057;5.23e-12;5!UBERON:0002193;3.81e-08;42!UBERON:0002106;4.91e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,7.83e-14,15;UBERON:0000179,7.83e-14,15;UBERON:0000463,7.83e-14,15;UBERON:0002193,1.71e-10,108;UBERON:0002390,3.53e-10,98;UBERON:0003061,3.53e-10,98;UBERON:0004177,1.97e-08,7;UBERON:0005057,1.97e-08,7;UBERON:0002106,3.27e-08,3;UBERON:0004854,3.27e-08,3;UBERON:0009034,3.27e-08,3;UBERON:0002095,3.27e-08,3;UBERON:0004782,3.27e-08,3;UBERON:0003281,3.27e-08,3;UBERON:0009664,3.27e-08,3;UBERON:0002296,3.27e-08,3;UBERON:0005602,3.27e-08,3;UBERON:0001179,3.27e-08,3;UBERON:0006293,3.27e-08,3 | |||
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| |||
|short_description=p2@HLA-DOA | |||
}} |
Revision as of 20:28, 13 September 2013
Short description: | p2@HLA-DOA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_HLA-DOA_5end |
Coexpression cluster: | C1215_migratory_CD19_adult_immature_Dendritic_Burkitt_vein |
Association with transcript: | 0bp_to_ENST00000432150_5end |
EntrezGene: | HLA-DOA |
HGNC: | 4936 |
UniProt: | C9IZS7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.55e-51 | 24 |
pro-B cell | 2.55e-51 | 24 |
B cell | 1.46e-35 | 14 |
lymphocyte | 5.41e-28 | 53 |
common lymphoid progenitor | 5.41e-28 | 53 |
lymphoid lineage restricted progenitor cell | 1.86e-26 | 52 |
leukocyte | 1.06e-23 | 136 |
hematopoietic cell | 7.73e-22 | 177 |
hematopoietic stem cell | 4.04e-20 | 168 |
nongranular leukocyte | 3.13e-19 | 115 |
hematopoietic lineage restricted progenitor cell | 3.20e-18 | 120 |
hematopoietic oligopotent progenitor cell | 5.65e-17 | 161 |
hematopoietic multipotent progenitor cell | 5.65e-17 | 161 |
dendritic cell | 2.24e-14 | 10 |
Langerhans cell | 8.47e-14 | 5 |
conventional dendritic cell | 1.87e-10 | 8 |
precursor B cell | 1.80e-08 | 3 |
plasmacytoid dendritic cell | 2.62e-08 | 3 |
adult endothelial progenitor cell | 1.25e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 7.83e-14 | 15 |
haemolymphatic fluid | 7.83e-14 | 15 |
organism substance | 7.83e-14 | 15 |
hemolymphoid system | 1.71e-10 | 108 |
hematopoietic system | 3.53e-10 | 98 |
blood island | 3.53e-10 | 98 |
hemopoietic organ | 1.97e-08 | 7 |
immune organ | 1.97e-08 | 7 |
spleen | 3.27e-08 | 3 |
gastrointestinal system mesentery | 3.27e-08 | 3 |
stomach region | 3.27e-08 | 3 |
mesentery | 3.27e-08 | 3 |
gastrointestinal system serosa | 3.27e-08 | 3 |
mesentery of stomach | 3.27e-08 | 3 |
gut mesentery | 3.27e-08 | 3 |
dorsal mesentery | 3.27e-08 | 3 |
dorsal mesogastrium | 3.27e-08 | 3 |
peritoneal cavity | 3.27e-08 | 3 |
spleen primordium | 3.27e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 3.93e-15 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.