FFCP PHASE1:Hg19::chr6:32821003..32821015,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6890|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=43|TSSclassifier=S|UniProt=F5H648|association_with_transcript=-468bp_to_ENST00000425148,uc011dqi.1_5end|coexpression_cluster_id=C21|description=CAGE_peak_5_at_TAP1_5end|id=chr6:32821003..32821015,-|ontology_enrichment_celltype=CL:0000738!3.58e-19!140;CL:0002087!1.41e-18!119;CL:0002057!1.95e-16!42;CL:0002031!2.20e-16!124;CL:0000860!1.31e-14!45;CL:0000988!6.00e-13!182;CL:0002032!2.95e-12!165;CL:0000837!2.95e-12!165;CL:0000037!5.41e-12!172;CL:0000566!5.41e-12!172;CL:0002009!9.79e-11!65;CL:0002194!1.67e-10!63;CL:0000576!1.67e-10!63;CL:0000040!1.67e-10!63;CL:0000559!1.67e-10!63;CL:0000766!6.18e-10!76;CL:0000557!1.31e-09!71;CL:0000839!4.34e-09!70;CL:0000542!4.09e-08!53;CL:0000051!4.09e-08!53;CL:0000838!1.00e-07!52|ontology_enrichment_celltype_v019=CL:0000860;2.74e-22;33!CL:0002057;2.74e-22;33!CL:0000473;6.01e-20;39!CL:0000234;6.01e-20;39!CL:0000576;2.14e-12;48!CL:0000081;8.87e-07;11!CL:0000766;9.33e-07;69|ontology_enrichment_celltype_v019_2=CL:0000473,4.16e-20,48;CL:0000234,4.16e-20,48;CL:0000860,1.87e-19,42;CL:0002057,1.87e-19,42;CL:0002194,1.17e-15,59;CL:0000576,1.17e-15,59;CL:0000040,1.17e-15,59;CL:0000559,1.17e-15,59;CL:0002009,4.37e-15,61;CL:0000766,7.41e-15,72;CL:0000839,8.43e-14,66;CL:0000557,1.45e-13,67;CL:0000988,3.80e-13,177;CL:0002087,1.35e-11,115;CL:0002031,5.33e-11,120;CL:0000738,6.58e-11,136;CL:0000763,3.63e-09,108;CL:0000049,3.63e-09,108;CL:0002032,9.25e-09,161;CL:0000837,9.25e-09,161;CL:0000037,2.84e-08,168;CL:0000081,9.33e-07,11|ontology_enrichment_development_v019=CL:0002057;1.17e-15;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060060;1.27e-08;1!DOID:0060061;1.27e-08;1!DOID:8691;1.27e-08;1|ontology_enrichment_disease_v019_2=DOID:0060060,1.13e-08,1;DOID:0060061,1.13e-08,1;DOID:8691,1.13e-08,1|ontology_enrichment_uberon=UBERON:0002193!4.25e-15!112;UBERON:0002390!6.40e-15!102;UBERON:0003061!6.40e-15!102;UBERON:0002371!1.90e-09!80;UBERON:0002405!4.58e-09!115;UBERON:0001474!5.26e-08!86;UBERON:0003081!3.34e-07!216|ontology_enrichment_uberon_v019=UBERON:0000178;9.64e-18;15!UBERON:0000179;9.64e-18;15!UBERON:0000463;9.64e-18;15!UBERON:0002331;1.73e-12;10!UBERON:0002171;1.27e-08;1!UBERON:0006518;1.27e-08;1!UBERON:0008949;1.27e-08;1!UBERON:0000101;1.27e-08;1!UBERON:0002167;1.27e-08;1!UBERON:0002390;6.35e-08;32|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.30e-21,98;UBERON:0003061,5.30e-21,98;UBERON:0002193,9.12e-19,108;UBERON:0000178,1.33e-17,15;UBERON:0000179,1.33e-17,15;UBERON:0000463,1.33e-17,15;UBERON:0002331,1.92e-12,10;UBERON:0000358,1.92e-12,10;UBERON:0000307,1.92e-12,10;UBERON:0000091,1.92e-12,10;UBERON:0000087,1.92e-12,10;UBERON:0007010,1.92e-12,10;UBERON:0007806,1.92e-12,10;UBERON:0008780,1.92e-12,10;UBERON:0005728,1.92e-12,10;UBERON:0002371,9.89e-12,76;UBERON:0001474,9.93e-11,82;UBERON:0003081,1.32e-09,203;UBERON:0004765,1.34e-09,90;UBERON:0002405,3.17e-09,93;UBERON:0002171,1.65e-08,1;UBERON:0006518,1.65e-08,1;UBERON:0008949,1.65e-08,1;UBERON:0000101,1.65e-08,1;UBERON:0002167,1.65e-08,1;UBERON:0001434,1.94e-08,100|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0,0,0,0,0.730310090387373,0.487932798790507,0,0,0,0,0,0,0.305653622991805,0.164201178899891,0.393553906568396,0.393364276848904,0,0,0,0.30120591877825,0,0.0774672005803016,0.142169232487422,0,0.553995408531877,0.401088894940283,0.217010870715852,0,0,0,0.145398238779565,0.377875943688809,0.485168122375632,0.232429036905685,0,0,3.16461631554365,1.2808035326455,1.6553756092201,0,0,1.35426486594342,0.188242339542605,0.272906150057846,0.224723484445085,0.918251677112708,0.320929027076094,0.639337125799041,2.30895910130701,1.99463657621632,2.55734850319616,1.7412554317715,2.26954089876456,0.622822248995575,1.7587406567972,1.0429658368404,0.65156653411535,0.605399502633369,0.368277635987565,0.949387162322653,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0.889509253863555,0,0,0,0,0,0,1.76171156811282,0.382273228125229,0,0,0,0.196709770113833,0,0.205601498999509,0.334372990781356,0,0,0,0.334231370655521,0.589211814949674,0,0,0,0.260118695119756,0,0.276350017785848,0,0,0.267540828089713,0,0.113309342697566,0,0,0,0,0,0,0,0.127986611154418,0,0.236777252044017,0,0.403213486449465,0.267440195783507,0.289648807765598,0,0,0,0.361439152384566,0,0,0,0,0,0.221729397462564,0,0.0654895377488563,0.364295288292542,0.370784442784429,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0.12663051166458,0,0,0.354668382198357,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0.122834317311768,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0.169560592310488,0,0,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0.201057944823262,0,0,0,0,0.115930404975077,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0.063497894292169,0.38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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6890 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=43 | |||
|TSSclassifier=S | |||
|UniProt=F5H648 | |||
|association_with_transcript=-468bp_to_ENST00000425148,uc011dqi.1_5end | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_5_at_TAP1_5end | |||
|id=chr6:32821003..32821015,- | |||
|ontology_enrichment_celltype=CL:0000738!3.58e-19!140;CL:0002087!1.41e-18!119;CL:0002057!1.95e-16!42;CL:0002031!2.20e-16!124;CL:0000860!1.31e-14!45;CL:0000988!6.00e-13!182;CL:0002032!2.95e-12!165;CL:0000837!2.95e-12!165;CL:0000037!5.41e-12!172;CL:0000566!5.41e-12!172;CL:0002009!9.79e-11!65;CL:0002194!1.67e-10!63;CL:0000576!1.67e-10!63;CL:0000040!1.67e-10!63;CL:0000559!1.67e-10!63;CL:0000766!6.18e-10!76;CL:0000557!1.31e-09!71;CL:0000839!4.34e-09!70;CL:0000542!4.09e-08!53;CL:0000051!4.09e-08!53;CL:0000838!1.00e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.74e-22;33!CL:0002057;2.74e-22;33!CL:0000473;6.01e-20;39!CL:0000234;6.01e-20;39!CL:0000576;2.14e-12;48!CL:0000081;8.87e-07;11!CL:0000766;9.33e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,4.16e-20,48;CL:0000234,4.16e-20,48;CL:0000860,1.87e-19,42;CL:0002057,1.87e-19,42;CL:0002194,1.17e-15,59;CL:0000576,1.17e-15,59;CL:0000040,1.17e-15,59;CL:0000559,1.17e-15,59;CL:0002009,4.37e-15,61;CL:0000766,7.41e-15,72;CL:0000839,8.43e-14,66;CL:0000557,1.45e-13,67;CL:0000988,3.80e-13,177;CL:0002087,1.35e-11,115;CL:0002031,5.33e-11,120;CL:0000738,6.58e-11,136;CL:0000763,3.63e-09,108;CL:0000049,3.63e-09,108;CL:0002032,9.25e-09,161;CL:0000837,9.25e-09,161;CL:0000037,2.84e-08,168;CL:0000081,9.33e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.17e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060060;1.27e-08;1!DOID:0060061;1.27e-08;1!DOID:8691;1.27e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,1.13e-08,1;DOID:0060061,1.13e-08,1;DOID:8691,1.13e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002193!4.25e-15!112;UBERON:0002390!6.40e-15!102;UBERON:0003061!6.40e-15!102;UBERON:0002371!1.90e-09!80;UBERON:0002405!4.58e-09!115;UBERON:0001474!5.26e-08!86;UBERON:0003081!3.34e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.64e-18;15!UBERON:0000179;9.64e-18;15!UBERON:0000463;9.64e-18;15!UBERON:0002331;1.73e-12;10!UBERON:0002171;1.27e-08;1!UBERON:0006518;1.27e-08;1!UBERON:0008949;1.27e-08;1!UBERON:0000101;1.27e-08;1!UBERON:0002167;1.27e-08;1!UBERON:0002390;6.35e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.30e-21,98;UBERON:0003061,5.30e-21,98;UBERON:0002193,9.12e-19,108;UBERON:0000178,1.33e-17,15;UBERON:0000179,1.33e-17,15;UBERON:0000463,1.33e-17,15;UBERON:0002331,1.92e-12,10;UBERON:0000358,1.92e-12,10;UBERON:0000307,1.92e-12,10;UBERON:0000091,1.92e-12,10;UBERON:0000087,1.92e-12,10;UBERON:0007010,1.92e-12,10;UBERON:0007806,1.92e-12,10;UBERON:0008780,1.92e-12,10;UBERON:0005728,1.92e-12,10;UBERON:0002371,9.89e-12,76;UBERON:0001474,9.93e-11,82;UBERON:0003081,1.32e-09,203;UBERON:0004765,1.34e-09,90;UBERON:0002405,3.17e-09,93;UBERON:0002171,1.65e-08,1;UBERON:0006518,1.65e-08,1;UBERON:0008949,1.65e-08,1;UBERON:0000101,1.65e-08,1;UBERON:0002167,1.65e-08,1;UBERON:0001434,1.94e-08,100 | |||
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| |||
|short_description=p5@TAP1 | |||
}} |
Revision as of 20:27, 13 September 2013
Short description: | p5@TAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_TAP1_5end |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | -468bp_to_ENST00000425148, uc011dqi.1_5end |
EntrezGene: | TAP1 |
HGNC: | 43 |
UniProt: | F5H648 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 4.16e-20 | 48 |
phagocyte | 4.16e-20 | 48 |
classical monocyte | 1.87e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.87e-19 | 42 |
monopoietic cell | 1.17e-15 | 59 |
monocyte | 1.17e-15 | 59 |
monoblast | 1.17e-15 | 59 |
promonocyte | 1.17e-15 | 59 |
macrophage dendritic cell progenitor | 4.37e-15 | 61 |
myeloid leukocyte | 7.41e-15 | 72 |
myeloid lineage restricted progenitor cell | 8.43e-14 | 66 |
granulocyte monocyte progenitor cell | 1.45e-13 | 67 |
hematopoietic cell | 3.80e-13 | 177 |
nongranular leukocyte | 1.35e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 5.33e-11 | 120 |
leukocyte | 6.58e-11 | 136 |
myeloid cell | 3.63e-09 | 108 |
common myeloid progenitor | 3.63e-09 | 108 |
hematopoietic oligopotent progenitor cell | 9.25e-09 | 161 |
hematopoietic multipotent progenitor cell | 9.25e-09 | 161 |
hematopoietic stem cell | 2.84e-08 | 168 |
blood cell | 9.33e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.30e-21 | 98 |
blood island | 5.30e-21 | 98 |
hemolymphoid system | 9.12e-19 | 108 |
blood | 1.33e-17 | 15 |
haemolymphatic fluid | 1.33e-17 | 15 |
organism substance | 1.33e-17 | 15 |
umbilical cord | 1.92e-12 | 10 |
blastocyst | 1.92e-12 | 10 |
blastula | 1.92e-12 | 10 |
bilaminar disc | 1.92e-12 | 10 |
inner cell mass | 1.92e-12 | 10 |
cleaving embryo | 1.92e-12 | 10 |
connecting stalk | 1.92e-12 | 10 |
inner cell mass derived epiblast | 1.92e-12 | 10 |
extraembryonic mesoderm | 1.92e-12 | 10 |
bone marrow | 9.89e-12 | 76 |
bone element | 9.93e-11 | 82 |
lateral plate mesoderm | 1.32e-09 | 203 |
skeletal element | 1.34e-09 | 90 |
immune system | 3.17e-09 | 93 |
lower lobe of right lung | 1.65e-08 | 1 |
right lung lobe | 1.65e-08 | 1 |
lower lobe of lung | 1.65e-08 | 1 |
lobe of lung | 1.65e-08 | 1 |
right lung | 1.65e-08 | 1 |
skeletal system | 1.94e-08 | 100 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 1.13e-08 | 1 |
cutaneous T cell lymphoma | 1.13e-08 | 1 |
mycosis fungoides | 1.13e-08 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.