FFCP PHASE1:Hg19::chr6:4936005..4936008,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C14|description=CAGE_peak_at_chr6:4936005..4936008,+|id=chr6:4936005..4936008,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000764;2.91e-07;2!CL:0000558;2.91e-07;2!CL:0002536;4.29e-07;2!CL:0002367;4.29e-07;2|ontology_enrichment_celltype_v019_2=CL:0000764,3.09e-07,2;CL:0000765,3.09e-07,2;CL:0000050,3.09e-07,2;CL:0000038,3.09e-07,2;CL:0000558,3.09e-07,2;CL:0000547,3.09e-07,2;CL:0000549,3.09e-07,2;CL:0000550,3.09e-07,2;CL:0000552,3.09e-07,2;CL:0002367,3.93e-07,2;CL:0002536,5.28e-07,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0000178;1.30e-49;15!UBERON:0000179;1.30e-49;15!UBERON:0000463;1.30e-49;15!UBERON:0002390;1.36e-20;32!UBERON:0002193;6.49e-11;42!UBERON:0005969;4.29e-07;2!UBERON:0003956;4.29e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.15e-49,15;UBERON:0000179,1.15e-49,15;UBERON:0000463,1.15e-49,15;UBERON:0007023,3.90e-09,114;UBERON:0004535,9.89e-08,109;UBERON:0001009,1.71e-07,112;UBERON:0005969,3.93e-07,2;UBERON:0003956,3.93e-07,2;UBERON:0002390,8.04e-07,98;UBERON:0003061,8.04e-07,98|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.245733936501509,0,1.09220686065086,0,0.123766352960047,0,0,0,0.730310090387373,0,0.861847406537515,0.204000691244253,0,0,0,0.125542639594803,0.0764134057479513,0,0.0787107813136792,0,0,0.464448369948228,0,0,0,0,0,0,0,0.401088894940283,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0.661044872784862,0,0,0,0,0,0,0.263384084775077,0,0,0,0.334372990781356,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0.289803085735052,0,0,0,0.339928028092699,0,0,0,0,0,0,0,0.255973222308837,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0.472674085820339,0.221729397462564,0,0.130979075497713,0.364295288292542,0,0,0,0,0,1.14398982156026,0,0.198762407366705,0,0.347140501607594,0,0,0,0,0,0,0,0.805658634218294,0,0,0,0,0.17859945656816,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0.234321431833797,0,0,0,0,0,0,0.408308342509787,0.122834317311768,0.103325781175765,0,0,0,0,0,0,0.277064115484183,0,0,0,0.113432183160021,0,0.213557388818567,0.211931901159562,0,0.412210116953756,0,0.558350568994769,0,0.389748020644795,0,0.276149695926898,0.161646056818812,0,0.302256294682921,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0,0,0,0,0,0.8231480226628,1.47008711385542,0,0,0,0,0,0,0,1.1240175325762,0,0,0.325808305310325,0,0,0.115930404975077,0.117408694235822,0,0,0,0.790204397959275,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0.290633938513962,0,0,0.176096868026452,0,0,0,0.380987365753014,0.763976851116555,0,0,0.102827492703324,0,0,0.336393253036082,0,0.1466765716419,0,0,0,0.26593811658487,0,0,0,0,0.142977993658148,1.08524321078289,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.24538298343828,0,0,0.207970861530807,0,0,0.117141414992713,0,0,0,0,0,0.260650843404249,0,0,0,0,0,0,1.66435439510497,0,0.248107807818777,0,0,0,0.511707249066704,0,0,0,0.177561725313127,0.246381468041427,0,0,0,0,0.184161977871793,0.229628896329213,0,0,0,0,0.784349769176855,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0.438519753291869,2.0914836081992,0.256450125116389,0.656029291399411,0.325378394664303,0,0,0.082509499920588,0,0,0,0.580024309752732,0.154048617114644,0,0,0,0,0,0.356128142586949,0.165284915360978,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0.95460974377781,0,0.359744915166629,0,0.117812402345686,0.202182481573316,0,0,0.48763373908959,0,0,0.272999822815972,0,0,0,0.66343897524122,0,0,0,0,0,0.281695602532241,0,0.294747123039363,0,0.354761064070598,0,0,1.51789269506286,0,0.384888450902048,0,0,0,0,0,0,0.229723400206959,7.10426652925037,9.94028369285088,1.13929437434833,2.85878130549347,1.64544909234478,9.07862635669804,8.10047155857172,0,0,0,0.245040215981032,0,0,0.0711418433484141,0,0.199579371432817,0.191505370132367,0.423347165447766,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0.19924798825107,0,0,0.102268682502155,0,0,0.179736702294654,0,0,0,2.3948309234694,0,0,0,0,0,0.174919999992391,0,0,0.254253650292766,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0.156980256395025,0.498635045700469,0,0,0,0,0.635746315921515,0,0.163232808159148,0,0,0,0,0,0,0.494255755786011,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0.311064574191741,0,0,0,0,0,0,0,0.0979923974143777,0.435296032902013,0,0.343972064943233,0,0,0,0,0,0,0.137041924646751,0,0,0,0.0801588202515337,0,0,0,0.229073192331831,0,0.2881095959762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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_at_chr6:4936005..4936008,+ | |||
|id=chr6:4936005..4936008,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000764;2.91e-07;2!CL:0000558;2.91e-07;2!CL:0002536;4.29e-07;2!CL:0002367;4.29e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,3.09e-07,2;CL:0000765,3.09e-07,2;CL:0000050,3.09e-07,2;CL:0000038,3.09e-07,2;CL:0000558,3.09e-07,2;CL:0000547,3.09e-07,2;CL:0000549,3.09e-07,2;CL:0000550,3.09e-07,2;CL:0000552,3.09e-07,2;CL:0002367,3.93e-07,2;CL:0002536,5.28e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.30e-49;15!UBERON:0000179;1.30e-49;15!UBERON:0000463;1.30e-49;15!UBERON:0002390;1.36e-20;32!UBERON:0002193;6.49e-11;42!UBERON:0005969;4.29e-07;2!UBERON:0003956;4.29e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.15e-49,15;UBERON:0000179,1.15e-49,15;UBERON:0000463,1.15e-49,15;UBERON:0007023,3.90e-09,114;UBERON:0004535,9.89e-08,109;UBERON:0001009,1.71e-07,112;UBERON:0005969,3.93e-07,2;UBERON:0003956,3.93e-07,2;UBERON:0002390,8.04e-07,98;UBERON:0003061,8.04e-07,98 | |||
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| |||
|short_description=p@chr6:4936005..4936008,+ | |||
}} |
Revision as of 21:19, 13 September 2013
Short description: | p@chr6:4936005..4936008, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:4936005..4936008, + |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 3.09e-07 | 2 |
erythroblast | 3.09e-07 | 2 |
megakaryocyte-erythroid progenitor cell | 3.09e-07 | 2 |
erythroid progenitor cell | 3.09e-07 | 2 |
reticulocyte | 3.09e-07 | 2 |
proerythroblast | 3.09e-07 | 2 |
basophilic erythroblast | 3.09e-07 | 2 |
polychromatophilic erythroblast | 3.09e-07 | 2 |
orthochromatic erythroblast | 3.09e-07 | 2 |
trabecular meshwork cell | 3.93e-07 | 2 |
amniotic epithelial cell | 5.28e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 1.15e-49 | 15 |
haemolymphatic fluid | 1.15e-49 | 15 |
organism substance | 1.15e-49 | 15 |
adult organism | 3.90e-09 | 114 |
cardiovascular system | 9.89e-08 | 109 |
circulatory system | 1.71e-07 | 112 |
reticulum trabeculare | 3.93e-07 | 2 |
aqueous drainage system | 3.93e-07 | 2 |
hematopoietic system | 8.04e-07 | 98 |
blood island | 8.04e-07 | 98 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.