FFCP PHASE1:Hg19::chr5:134788010..134788046,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=497189|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=34024|TSSclassifier=S|UniProt=Q6ZNK6|association_with_transcript=42bp_to_ENST00000537858,NM_001099221,uc003law.3_5end|coexpression_cluster_id=C4466|description=CAGE_peak_1_at_TIFAB_5end|id=chr5:134788010..134788046,-|ontology_enrichment_celltype=CL:0002009!1.34e-41!65;CL:0000557!7.66e-41!71;CL:0002194!8.71e-39!63;CL:0000576!8.71e-39!63;CL:0000040!8.71e-39!63;CL:0000559!8.71e-39!63;CL:0000763!1.03e-37!112;CL:0000049!1.03e-37!112;CL:0000839!3.28e-35!70;CL:0000766!1.50e-34!76;CL:0000037!1.30e-30!172;CL:0000566!1.30e-30!172;CL:0000738!6.03e-29!140;CL:0000988!9.28e-28!182;CL:0002032!1.47e-25!165;CL:0000837!1.47e-25!165;CL:0002087!3.72e-23!119;CL:0002031!6.49e-22!124;CL:0002057!2.38e-21!42;CL:0000451!1.46e-19!10;CL:0000860!2.34e-19!45;CL:0000990!3.99e-16!8;CL:0000840!2.27e-11!5;CL:0001029!2.27e-11!5;CL:0000453!1.63e-09!5;CL:0000784!8.21e-07!3|ontology_enrichment_celltype_v019=CL:0000451;5.39e-39;10!CL:0000990;8.28e-32;8!CL:0000840;6.23e-22;5!CL:0000235;1.35e-21;6!CL:0000453;4.79e-18;5!CL:0000784;1.78e-12;3!CL:0002619;4.41e-12;3!CL:0000473;3.95e-09;39!CL:0000234;3.95e-09;39!CL:0000763;2.86e-08;100!CL:0001014;3.77e-08;2!CL:0001016;3.77e-08;2!CL:0000576;4.00e-08;48!CL:0000766;1.27e-07;69|ontology_enrichment_celltype_v019_2=CL:0000451,5.73e-39,10;CL:0000763,5.77e-34,108;CL:0000049,5.77e-34,108;CL:0002009,3.01e-32,61;CL:0000990,8.48e-32,8;CL:0000557,1.86e-31,67;CL:0002194,4.19e-28,59;CL:0000576,4.19e-28,59;CL:0000040,4.19e-28,59;CL:0000559,4.19e-28,59;CL:0000839,1.63e-24,66;CL:0000037,3.70e-23,168;CL:0000766,5.46e-22,72;CL:0000840,6.73e-22,5;CL:0001029,6.73e-22,5;CL:0000235,1.59e-21,6;CL:0000988,1.67e-21,177;CL:0002032,6.55e-20,161;CL:0000837,6.55e-20,161;CL:0000453,4.80e-18,5;CL:0000738,2.23e-17,136;CL:0002031,2.69e-13,120;CL:0000784,1.85e-12,3;CL:0002619,4.67e-12,3;CL:0002087,1.29e-11,115;CL:0000473,7.69e-11,48;CL:0000234,7.69e-11,48;CL:0001014,3.98e-08,2;CL:0001016,3.98e-08,2|ontology_enrichment_development_v019=CL:0000049;1.55e-11;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:8692;8.95e-08;31|ontology_enrichment_disease_v019_2=DOID:8692,5.84e-08,31|ontology_enrichment_uberon=UBERON:0002390!1.48e-47!102;UBERON:0003061!1.48e-47!102;UBERON:0002193!3.73e-45!112;UBERON:0002371!1.67e-36!80;UBERON:0001474!7.06e-33!86;UBERON:0002405!4.33e-31!115;UBERON:0004765!9.85e-26!101;UBERON:0001434!9.85e-26!101;UBERON:0003081!5.62e-17!216;UBERON:0002204!8.33e-13!167;UBERON:0007023!1.08e-10!115;UBERON:0000178!5.73e-07!15;UBERON:0000179!5.73e-07!15;UBERON:0000463!5.73e-07!15|ontology_enrichment_uberon_v019=UBERON:0004177;9.61e-11;5!UBERON:0005057;9.61e-11;5!UBERON:0002370;1.55e-07;2!UBERON:0005058;1.55e-07;2!UBERON:0009113;1.55e-07;2!UBERON:0002405;6.43e-07;27|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.95e-35,108;UBERON:0002405,3.33e-35,93;UBERON:0002390,4.82e-35,98;UBERON:0003061,4.82e-35,98;UBERON:0002371,2.43e-29,76;UBERON:0001474,1.08e-26,82;UBERON:0004765,1.04e-23,90;UBERON:0001434,1.19e-20,100;UBERON:0003081,1.34e-13,203;UBERON:0002204,1.43e-10,167;UBERON:0004177,6.70e-08,7;UBERON:0005057,6.70e-08,7|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.154816123316076,0,0,0,0,0,7.04641054403633,0.553995408531877,0,0.651032612147555,8.06095707263728,7.77344798445551,8.24241816429397,0.145398238779565,1.13362783106643,1.94067248950253,0.232429036905685,0,0,0,0.256160706529101,0.47296445977717,0.689491361473237,0.645484683583826,0,0.188242339542605,0,0.674170453335254,0.306083892370903,0,2.55734850319616,1.64925650093358,0.199463657621632,1.70489900213078,0.290209238628584,1.13477044938228,0,0,0,0.217188844705117,0,0.368277635987565,0.316462387440884,1.05627643155971,0.425208599930087,1.67726916406701,0.561643155732475,0,0.803627933485401,0,0,0.182664153764634,0,0.546138611262131,0,0.426730222566507,0,0,0,0,0,0,0,0,0,6.847986204152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.301150238155546,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,6.49094787309367,6.61693001737215,8.64226743372624,14.5479280826259,16.0158575018436,14.486842551853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23108503043699,4.21207677250628,2.37809859661965,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.378615870531,9.5428847372104,14.7583757638122,0,0,0,0,0,0,0,0.197030760201927,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=497189 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=34024 | |||
|TSSclassifier=S | |||
|UniProt=Q6ZNK6 | |||
|association_with_transcript=42bp_to_ENST00000537858,NM_001099221,uc003law.3_5end | |||
|coexpression_cluster_id=C4466 | |||
|description=CAGE_peak_1_at_TIFAB_5end | |||
|id=chr5:134788010..134788046,- | |||
|ontology_enrichment_celltype=CL:0002009!1.34e-41!65;CL:0000557!7.66e-41!71;CL:0002194!8.71e-39!63;CL:0000576!8.71e-39!63;CL:0000040!8.71e-39!63;CL:0000559!8.71e-39!63;CL:0000763!1.03e-37!112;CL:0000049!1.03e-37!112;CL:0000839!3.28e-35!70;CL:0000766!1.50e-34!76;CL:0000037!1.30e-30!172;CL:0000566!1.30e-30!172;CL:0000738!6.03e-29!140;CL:0000988!9.28e-28!182;CL:0002032!1.47e-25!165;CL:0000837!1.47e-25!165;CL:0002087!3.72e-23!119;CL:0002031!6.49e-22!124;CL:0002057!2.38e-21!42;CL:0000451!1.46e-19!10;CL:0000860!2.34e-19!45;CL:0000990!3.99e-16!8;CL:0000840!2.27e-11!5;CL:0001029!2.27e-11!5;CL:0000453!1.63e-09!5;CL:0000784!8.21e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000451;5.39e-39;10!CL:0000990;8.28e-32;8!CL:0000840;6.23e-22;5!CL:0000235;1.35e-21;6!CL:0000453;4.79e-18;5!CL:0000784;1.78e-12;3!CL:0002619;4.41e-12;3!CL:0000473;3.95e-09;39!CL:0000234;3.95e-09;39!CL:0000763;2.86e-08;100!CL:0001014;3.77e-08;2!CL:0001016;3.77e-08;2!CL:0000576;4.00e-08;48!CL:0000766;1.27e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000451,5.73e-39,10;CL:0000763,5.77e-34,108;CL:0000049,5.77e-34,108;CL:0002009,3.01e-32,61;CL:0000990,8.48e-32,8;CL:0000557,1.86e-31,67;CL:0002194,4.19e-28,59;CL:0000576,4.19e-28,59;CL:0000040,4.19e-28,59;CL:0000559,4.19e-28,59;CL:0000839,1.63e-24,66;CL:0000037,3.70e-23,168;CL:0000766,5.46e-22,72;CL:0000840,6.73e-22,5;CL:0001029,6.73e-22,5;CL:0000235,1.59e-21,6;CL:0000988,1.67e-21,177;CL:0002032,6.55e-20,161;CL:0000837,6.55e-20,161;CL:0000453,4.80e-18,5;CL:0000738,2.23e-17,136;CL:0002031,2.69e-13,120;CL:0000784,1.85e-12,3;CL:0002619,4.67e-12,3;CL:0002087,1.29e-11,115;CL:0000473,7.69e-11,48;CL:0000234,7.69e-11,48;CL:0001014,3.98e-08,2;CL:0001016,3.98e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000049;1.55e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:8692;8.95e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,5.84e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.48e-47!102;UBERON:0003061!1.48e-47!102;UBERON:0002193!3.73e-45!112;UBERON:0002371!1.67e-36!80;UBERON:0001474!7.06e-33!86;UBERON:0002405!4.33e-31!115;UBERON:0004765!9.85e-26!101;UBERON:0001434!9.85e-26!101;UBERON:0003081!5.62e-17!216;UBERON:0002204!8.33e-13!167;UBERON:0007023!1.08e-10!115;UBERON:0000178!5.73e-07!15;UBERON:0000179!5.73e-07!15;UBERON:0000463!5.73e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0004177;9.61e-11;5!UBERON:0005057;9.61e-11;5!UBERON:0002370;1.55e-07;2!UBERON:0005058;1.55e-07;2!UBERON:0009113;1.55e-07;2!UBERON:0002405;6.43e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.95e-35,108;UBERON:0002405,3.33e-35,93;UBERON:0002390,4.82e-35,98;UBERON:0003061,4.82e-35,98;UBERON:0002371,2.43e-29,76;UBERON:0001474,1.08e-26,82;UBERON:0004765,1.04e-23,90;UBERON:0001434,1.19e-20,100;UBERON:0003081,1.34e-13,203;UBERON:0002204,1.43e-10,167;UBERON:0004177,6.70e-08,7;UBERON:0005057,6.70e-08,7 | |||
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|short_description=p1@TIFAB | |||
}} |
Revision as of 13:16, 13 September 2013
Short description: | p1@TIFAB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_TIFAB_5end |
Coexpression cluster: | C4466_acute_biphenotypic_Dendritic_Monocytederived_migratory_granulocyte_CD34 |
Association with transcript: | 42bp_to_ENST00000537858, NM_001099221, uc003law.3_5end |
EntrezGene: | TIFAB |
HGNC: | 34024 |
UniProt: | Q6ZNK6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.95e-35 | 108 |
immune system | 3.33e-35 | 93 |
hematopoietic system | 4.82e-35 | 98 |
blood island | 4.82e-35 | 98 |
bone marrow | 2.43e-29 | 76 |
bone element | 1.08e-26 | 82 |
skeletal element | 1.04e-23 | 90 |
skeletal system | 1.19e-20 | 100 |
lateral plate mesoderm | 1.34e-13 | 203 |
musculoskeletal system | 1.43e-10 | 167 |
hemopoietic organ | 6.70e-08 | 7 |
immune organ | 6.70e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 5.84e-08 | 31 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.