FFCP PHASE1:Hg19::chr5:119697827..119697855,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C137|description=CAGE_peak_at_chr5:119697827..119697855,+|id=chr5:119697827..119697855,+|ontology_enrichment_celltype=CL:0002620!1.66e-31!23;CL:0002551!1.34e-14!6;CL:0000057!1.32e-09!75|ontology_enrichment_celltype_v019=CL:0000319;1.08e-19;1!CL:0002574;2.06e-19;1!CL:0000159;1.57e-10;2!CL:1000415;1.72e-10;2!CL:0000047;3.13e-10;2!CL:0000346;3.06e-07;3!CL:1000428;3.06e-07;3|ontology_enrichment_celltype_v019_2=CL:0000319,1.08e-19,1;CL:0002574,1.88e-19,1;CL:0000159,1.57e-10,2;CL:1000415,1.72e-10,2;CL:0000346,2.79e-07,3;CL:1000428,2.79e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:17!3.29e-12!5;DOID:450!3.29e-12!5;DOID:66!3.29e-12!5;DOID:423!3.29e-12!5;DOID:0080000!3.29e-12!5;DOID:11722!3.29e-12!5;DOID:1036!1.38e-07!8|ontology_enrichment_disease_v019=DOID:3030;1.08e-19;1!DOID:5662;1.56e-19;1!DOID:4556;1.82e-07;3|ontology_enrichment_disease_v019_2=DOID:3030,1.08e-19,1;DOID:5662,1.56e-19,1;DOID:4556,1.82e-07,3|ontology_enrichment_uberon=UBERON:0002097!4.35e-28!40;UBERON:0002199!1.97e-24!45;UBERON:0002416!1.97e-24!45;UBERON:0002067!6.46e-14!9;UBERON:0004016!6.46e-14!9;UBERON:0010083!6.46e-14!9;UBERON:0003102!1.50e-11!95|ontology_enrichment_uberon_v019=UBERON:0002110;2.05e-07;3!UBERON:0000412;3.06e-07;3!UBERON:0001992;3.06e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0002110,2.05e-07,3;UBERON:0006242,2.05e-07,3;UBERON:0000412,2.79e-07,3;UBERON:0001992,2.79e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0.56738522469114,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0.149448680551801,0.23486899728753,0.323745888736263,0.140450806702248,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0.358779271377724,1.06778694409284,0.211931901159562,0,0.618315175430633,0,0.37223371266318,0.506328996723799,0.0974370051611986,0,0.828449087780694,0,0,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0.928735856063958,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64911180765948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485442086998054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0.19606253431774,0.671286347903371,3.03605972358696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.596143835108969,0,0,6.09207033911656,0,0,0,0,0,0,0,0,0,0,1.01998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4743897173021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11444506695002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0.521745061811734,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453411851024545,0,0,0,0,0,0,0.192914038270915,0,0,0.345430341731199,0,0,0.194860308839388,0,0,0.327609848846413,7.12741435385786,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.80166426424772,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215166616178029,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr5:119697827..119697855,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C137 | |||
|description=CAGE_peak_at_chr5:119697827..119697855,+ | |||
|id=chr5:119697827..119697855,+ | |||
|ontology_enrichment_celltype=CL:0002620!1.66e-31!23;CL:0002551!1.34e-14!6;CL:0000057!1.32e-09!75 | |||
|ontology_enrichment_celltype_v019=CL:0000319;1.08e-19;1!CL:0002574;2.06e-19;1!CL:0000159;1.57e-10;2!CL:1000415;1.72e-10;2!CL:0000047;3.13e-10;2!CL:0000346;3.06e-07;3!CL:1000428;3.06e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,1.08e-19,1;CL:0002574,1.88e-19,1;CL:0000159,1.57e-10,2;CL:1000415,1.72e-10,2;CL:0000346,2.79e-07,3;CL:1000428,2.79e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!3.29e-12!5;DOID:450!3.29e-12!5;DOID:66!3.29e-12!5;DOID:423!3.29e-12!5;DOID:0080000!3.29e-12!5;DOID:11722!3.29e-12!5;DOID:1036!1.38e-07!8 | |||
|ontology_enrichment_disease_v019=DOID:3030;1.08e-19;1!DOID:5662;1.56e-19;1!DOID:4556;1.82e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,1.08e-19,1;DOID:5662,1.56e-19,1;DOID:4556,1.82e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0002097!4.35e-28!40;UBERON:0002199!1.97e-24!45;UBERON:0002416!1.97e-24!45;UBERON:0002067!6.46e-14!9;UBERON:0004016!6.46e-14!9;UBERON:0010083!6.46e-14!9;UBERON:0003102!1.50e-11!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0002110;2.05e-07;3!UBERON:0000412;3.06e-07;3!UBERON:0001992;3.06e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002110,2.05e-07,3;UBERON:0006242,2.05e-07,3;UBERON:0000412,2.79e-07,3;UBERON:0001992,2.79e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0.56738522469114,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0.149448680551801,0.23486899728753,0.323745888736263,0.140450806702248,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0.358779271377724,1.06778694409284,0.211931901159562,0,0.618315175430633,0,0.37223371266318,0.506328996723799,0.0974370051611986,0,0.828449087780694,0,0,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0.928735856063958,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64911180765948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485442086998054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0.19606253431774,0.671286347903371,3.03605972358696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.596143835108969,0,0,6.09207033911656,0,0,0,0,0,0,0,0,0,0,1.01998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4743897173021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11444506695002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0.521745061811734,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453411851024545,0,0,0,0,0,0,0.192914038270915,0,0,0.345430341731199,0,0,0.194860308839388,0,0,0.327609848846413,7.12741435385786,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.80166426424772,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215166616178029,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:119697827..119697855,+ | |||
}} |
Revision as of 12:50, 13 September 2013
Short description: | p@chr5:119697827..119697855, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:119697827..119697855, + |
Coexpression cluster: | C137_large_ductal_melanoma_cervical_Endothelial_Smooth_chronic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 1.08e-19 | 1 |
stromal cell of pancreas | 1.88e-19 | 1 |
seromucus secreting cell | 1.57e-10 | 2 |
epithelial cell of gall bladder | 1.72e-10 | 2 |
hair follicle dermal papilla cell | 2.79e-07 | 3 |
stem cell of epidermis | 2.79e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
gallbladder | 2.05e-07 | 3 |
gall bladder primordium | 2.05e-07 | 3 |
dermal papilla | 2.79e-07 | 3 |
papillary layer of dermis | 2.79e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 1.08e-19 | 1 |
pleomorphic carcinoma | 1.56e-19 | 1 |
lung large cell carcinoma | 1.82e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.