FFCP PHASE1:Hg19::chr5:110104185..110104192,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C458|description=CAGE_peak_at_chr5:110104185..110104192,-|id=chr5:110104185..110104192,-|ontology_enrichment_celltype=CL:0002623!7.42e-20!3;CL:1000487!1.22e-12!2;CL:0000622!3.99e-12!5;CL:0000154!3.50e-10!6;CL:0002540!5.88e-10!6;CL:0002622!5.08e-09!3;CL:0002582!1.33e-08!3;CL:0002570!2.25e-07!8;CL:0002550!2.50e-07!1;CL:0000569!3.63e-07!4;CL:0000011!3.63e-07!4;CL:0000150!6.30e-07!9;CL:0000188!9.76e-07!9|ontology_enrichment_celltype_v019=CL:0002623;4.99e-45;3!CL:0000622;1.59e-27;5!CL:0000154;3.88e-23;6!CL:0000150;8.39e-16;9!CL:0000515;2.89e-12;3!CL:0000056;1.57e-09;4!CL:0000569;1.57e-09;4!CL:0002251;1.17e-07;20!CL:0002540;8.02e-07;6!CL:0002551;8.97e-07;6|ontology_enrichment_celltype_v019_2=CL:0002623,5.00e-45,3;CL:0000622,1.59e-27,5;CL:0000154,3.88e-23,6;CL:0000150,8.39e-16,9;CL:0000515,1.57e-09,4;CL:0000569,1.70e-09,4;CL:0000011,1.70e-09,4;CL:0002251,1.17e-07,20;CL:0002540,8.02e-07,6;CL:0002551,8.48e-07,6|ontology_enrichment_development_v019=CL:0000011;1.57e-09;4!CL:0000515;1.57e-09;4|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001013!1.11e-10!14;UBERON:0001044!3.50e-10!6;UBERON:0003293!3.50e-10!6;UBERON:0003294!3.50e-10!6;UBERON:0010047!3.50e-10!6;UBERON:0000167!3.50e-10!6;UBERON:0002367!7.89e-09!11;UBERON:0010147!7.89e-09!11;UBERON:0009846!7.89e-09!11;UBERON:0003353!7.89e-09!11;UBERON:0004902!7.89e-09!11;UBERON:0003820!7.89e-09!11;UBERON:0009847!7.89e-09!11;UBERON:0003937!4.20e-08!12;UBERON:0005399!4.20e-08!12;UBERON:0000161!9.90e-08!35;UBERON:0001282!4.61e-07!1;UBERON:0009842!4.61e-07!1;UBERON:0003704!4.61e-07!1;UBERON:0001171!4.61e-07!1;UBERON:0001172!4.61e-07!1;UBERON:0000162!5.85e-07!14;UBERON:0001353!5.85e-07!14;UBERON:0000163!5.85e-07!14;UBERON:0006866!5.85e-07!14;UBERON:0000164!5.85e-07!14;UBERON:0000931!5.85e-07!14|ontology_enrichment_uberon_v019=UBERON:0001044;3.88e-23;6!UBERON:0003293;3.88e-23;6!UBERON:0003294;3.88e-23;6!UBERON:0010047;3.88e-23;6!UBERON:0003408;3.88e-23;6!UBERON:0000167;3.88e-23;6!UBERON:0001041;1.57e-10;14!UBERON:0000161;5.16e-08;19!UBERON:0000166;5.16e-08;19|ontology_enrichment_uberon_v019_2=UBERON:0001044,3.88e-23,6;UBERON:0003293,3.88e-23,6;UBERON:0003294,3.88e-23,6;UBERON:0010047,3.88e-23,6;UBERON:0000167,3.88e-23,6;UBERON:0003408,2.49e-14,10;UBERON:0000166,4.79e-07,22|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0.234321431833797,0,0,1.94283284717341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64381058040307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0.511707249066704,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0,0,0.182091168006717,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.676695028044854,0.154048617114644,0,0,0,0,0.852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.949138274156178,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0.554805861502613,0.568209015825267,0.251567901752575,4.44905610798268,1.37304041038154,0.302461847526478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414432328326074,8.1944869005096,6.22133695632683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr5:110104185..110104192,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C458 | |||
|description=CAGE_peak_at_chr5:110104185..110104192,- | |||
|id=chr5:110104185..110104192,- | |||
|ontology_enrichment_celltype=CL:0002623!7.42e-20!3;CL:1000487!1.22e-12!2;CL:0000622!3.99e-12!5;CL:0000154!3.50e-10!6;CL:0002540!5.88e-10!6;CL:0002622!5.08e-09!3;CL:0002582!1.33e-08!3;CL:0002570!2.25e-07!8;CL:0002550!2.50e-07!1;CL:0000569!3.63e-07!4;CL:0000011!3.63e-07!4;CL:0000150!6.30e-07!9;CL:0000188!9.76e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002623;4.99e-45;3!CL:0000622;1.59e-27;5!CL:0000154;3.88e-23;6!CL:0000150;8.39e-16;9!CL:0000515;2.89e-12;3!CL:0000056;1.57e-09;4!CL:0000569;1.57e-09;4!CL:0002251;1.17e-07;20!CL:0002540;8.02e-07;6!CL:0002551;8.97e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,5.00e-45,3;CL:0000622,1.59e-27,5;CL:0000154,3.88e-23,6;CL:0000150,8.39e-16,9;CL:0000515,1.57e-09,4;CL:0000569,1.70e-09,4;CL:0000011,1.70e-09,4;CL:0002251,1.17e-07,20;CL:0002540,8.02e-07,6;CL:0002551,8.48e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000011;1.57e-09;4!CL:0000515;1.57e-09;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001013!1.11e-10!14;UBERON:0001044!3.50e-10!6;UBERON:0003293!3.50e-10!6;UBERON:0003294!3.50e-10!6;UBERON:0010047!3.50e-10!6;UBERON:0000167!3.50e-10!6;UBERON:0002367!7.89e-09!11;UBERON:0010147!7.89e-09!11;UBERON:0009846!7.89e-09!11;UBERON:0003353!7.89e-09!11;UBERON:0004902!7.89e-09!11;UBERON:0003820!7.89e-09!11;UBERON:0009847!7.89e-09!11;UBERON:0003937!4.20e-08!12;UBERON:0005399!4.20e-08!12;UBERON:0000161!9.90e-08!35;UBERON:0001282!4.61e-07!1;UBERON:0009842!4.61e-07!1;UBERON:0003704!4.61e-07!1;UBERON:0001171!4.61e-07!1;UBERON:0001172!4.61e-07!1;UBERON:0000162!5.85e-07!14;UBERON:0001353!5.85e-07!14;UBERON:0000163!5.85e-07!14;UBERON:0006866!5.85e-07!14;UBERON:0000164!5.85e-07!14;UBERON:0000931!5.85e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;3.88e-23;6!UBERON:0003293;3.88e-23;6!UBERON:0003294;3.88e-23;6!UBERON:0010047;3.88e-23;6!UBERON:0003408;3.88e-23;6!UBERON:0000167;3.88e-23;6!UBERON:0001041;1.57e-10;14!UBERON:0000161;5.16e-08;19!UBERON:0000166;5.16e-08;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,3.88e-23,6;UBERON:0003293,3.88e-23,6;UBERON:0003294,3.88e-23,6;UBERON:0010047,3.88e-23,6;UBERON:0000167,3.88e-23,6;UBERON:0003408,2.49e-14,10;UBERON:0000166,4.79e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0.234321431833797,0,0,1.94283284717341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64381058040307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0.511707249066704,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0,0,0.182091168006717,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.676695028044854,0.154048617114644,0,0,0,0,0.852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.949138274156178,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0.554805861502613,0.568209015825267,0.251567901752575,4.44905610798268,1.37304041038154,0.302461847526478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414432328326074,8.1944869005096,6.22133695632683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:110104185..110104192,- | |||
}} |
Revision as of 12:37, 13 September 2013
Short description: | p@chr5:110104185..110104192, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:110104185..110104192, - |
Coexpression cluster: | C458_salivary_parietal_middle_locus_medial_occipital_globus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 5.00e-45 | 3 |
acinar cell | 1.59e-27 | 5 |
protein secreting cell | 3.88e-23 | 6 |
glandular epithelial cell | 8.39e-16 | 9 |
skeletal muscle myoblast | 1.57e-09 | 4 |
cardiac mesenchymal cell | 1.70e-09 | 4 |
migratory trunk neural crest cell | 1.70e-09 | 4 |
epithelial cell of alimentary canal | 1.17e-07 | 20 |
mesenchymal stem cell of the bone marrow | 8.02e-07 | 6 |
fibroblast of dermis | 8.48e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 3.88e-23 | 6 |
gland of oral region | 3.88e-23 | 6 |
gland of foregut | 3.88e-23 | 6 |
oral gland | 3.88e-23 | 6 |
oral cavity | 3.88e-23 | 6 |
gland of gut | 2.49e-14 | 10 |
oral opening | 4.79e-07 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.