FFCP PHASE1:Hg19::chr5:32711830..32711846,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4883|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7945|TSSclassifier=S|UniProt=|association_with_transcript=1bp_to_ENST00000415167_5end|description=CAGE_peak_16_at_NPR3_5end|id=chr5:32711830..32711846,+|ontology_enrichment_celltype=CL:0000055!7.51e-15!180;CL:0000680!2.73e-09!57;CL:0000056!2.73e-09!57;CL:0000355!2.73e-09!57;CL:0000187!1.63e-07!54;CL:0000057!5.50e-07!75;CL:0000183!7.06e-07!59;CL:0000136!8.78e-07!15;CL:0000393!8.82e-07!60;CL:0000211!8.82e-07!60|ontology_enrichment_celltype_v019=CL:0002564;4.00e-07;3|ontology_enrichment_celltype_v019_2=CL:0000136,8.91e-08,15;CL:0002564,6.59e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001134!4.94e-09!61;UBERON:0002036!4.94e-09!61;UBERON:0003082!4.94e-09!61;UBERON:0002385!1.80e-08!63;UBERON:0001015!1.80e-08!63;UBERON:0000383!1.80e-08!63;UBERON:0004457!1.05e-07!12;UBERON:0000042!1.05e-07!12;UBERON:0000914!2.95e-07!83;UBERON:0002329!2.95e-07!83;UBERON:0003077!2.95e-07!83;UBERON:0003059!2.95e-07!83;UBERON:0007282!2.95e-07!83;UBERON:0009618!2.95e-07!83;UBERON:0007285!2.95e-07!83;UBERON:0004290!8.45e-07!70|ontology_enrichment_uberon_v019=UBERON:0005406;2.52e-11;2!UBERON:0002242;4.00e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0005406,2.59e-11,2;UBERON:0002242,6.59e-07,3;UBERON:0003068,6.59e-07,3;UBERON:0002328,6.59e-07,3;UBERON:0004880,6.59e-07,3|phase1_expression=0.908391896352783,2.35510576280081,0.563817616383885,2.00146596706261,0.446961094427288,3.48935409640147,0,0,0,0,0,0,0,0.495065411840187,0.331397375727916,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0.393364276848904,0,0,0,0,0,0,0,8.22081230137572,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0.224723484445085,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.93027971474155,2.24203425192614,5.00429761072646,0,0,0,0.167186495390678,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.722878304769133,2.50668955317945,0.869079113764942,0,0.486634870302636,0,0.443458794925128,0.087834785693126,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506522046658319,0,2.58152958673932,0.354668382198357,0,0,0.74000264525148,0,0,0,0.756787138224657,0,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0.247266929278557,0,0,0,0,0,0,0,0.300476117813194,0,0,0,0.847727604638247,2.10063767259082,0.618315175430633,0.257640540045629,0.37223371266318,1.85653965465393,2.33848812386877,0.252433774244115,0.368199594569197,0.484938170456436,0.355009592516614,0.705264687593482,0.169560592310488,0,0,0,0,0,0,0.414644220061482,0.252320850875628,0,0,0,0,0.928735856063958,0.721879481669586,0.118306800039844,0.505754070234305,0,0,0,0,0,0.392442930250692,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336393253036082,0,0.22001485746285,0,0,0,0,0,0,0,0,0.142977993658148,0.542621605391443,0,0,1.06617584622764,0,0,0,0.099972991182057,0,0,0,0.718874566474748,2.29723871668228,1.42636905040718,1.44781306667579,0.61642896765115,0.716243852959582,0,0,0,0,0,0,0,0.670065061337395,0,0,0,0,0.736148950314839,1.00034104211935,1.08506009479894,0.623912584592421,0.892144943985809,0.315404830067869,0.585707074963566,0.902838299183157,0,0,0.664225598535437,0.368738337083406,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0,0.248107807818777,2.14846762603287,0.561320188866147,0.384417447767103,1.02341449813341,0.160853921143607,5.93672265779964,0.154209693802656,0,0.246381468041427,0,0,0,0,0,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307007349452259,0.551346289938122,0.644521469209642,0.580066775656914,0,0.356128142586949,0,0,0,0,0,3.77774816196768,0.6970372701606,0,0.532306030317022,1.73986598415015,0.18532421910392,0.143124886741991,0,0.949138274156178,0.190630193923825,0.255897791311334,0.42793898803392,0.636406495851874,1.56989728039846,0.179872457583315,0,0,0,0,0,0,0.243713489631284,0,0,0.141405431953713,1.13008116620243,1.10273068709225,0.66343897524122,0,0.578775534266688,0,0,0.6196469961995,0,0,0,0,0.354761064070598,0.633322905892992,0.329294892959902,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.957526850661834,2.32840940996271,0.973865820823666,7.01992945283647,0,0,0,1.35433422241283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,1.99613798001194,0,0,0,0.568967241427498,0,0,0,0,0,0,0,0,0,0,0,1.63407695278485,0.139423744278603,0,0,0,0.0897576444097721,0,0,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264768380074501,0.225980740780532,0,0,0.0633107959558787,0,0.24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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4883 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7945 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=1bp_to_ENST00000415167_5end | |||
|description=CAGE_peak_16_at_NPR3_5end | |||
|id=chr5:32711830..32711846,+ | |||
|ontology_enrichment_celltype=CL:0000055!7.51e-15!180;CL:0000680!2.73e-09!57;CL:0000056!2.73e-09!57;CL:0000355!2.73e-09!57;CL:0000187!1.63e-07!54;CL:0000057!5.50e-07!75;CL:0000183!7.06e-07!59;CL:0000136!8.78e-07!15;CL:0000393!8.82e-07!60;CL:0000211!8.82e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0002564;4.00e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,8.91e-08,15;CL:0002564,6.59e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!4.94e-09!61;UBERON:0002036!4.94e-09!61;UBERON:0003082!4.94e-09!61;UBERON:0002385!1.80e-08!63;UBERON:0001015!1.80e-08!63;UBERON:0000383!1.80e-08!63;UBERON:0004457!1.05e-07!12;UBERON:0000042!1.05e-07!12;UBERON:0000914!2.95e-07!83;UBERON:0002329!2.95e-07!83;UBERON:0003077!2.95e-07!83;UBERON:0003059!2.95e-07!83;UBERON:0007282!2.95e-07!83;UBERON:0009618!2.95e-07!83;UBERON:0007285!2.95e-07!83;UBERON:0004290!8.45e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0005406;2.52e-11;2!UBERON:0002242;4.00e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005406,2.59e-11,2;UBERON:0002242,6.59e-07,3;UBERON:0003068,6.59e-07,3;UBERON:0002328,6.59e-07,3;UBERON:0004880,6.59e-07,3 | |||
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|short_description=p16@NPR3 | |||
}} |
Revision as of 15:26, 13 September 2013
Short description: | p16@NPR3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_16_at_NPR3_5end |
Coexpression cluster: | NA |
Association with transcript: | 1bp_to_ENST00000415167_5end |
EntrezGene: | NPR3 |
HGNC: | 7945 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 8.91e-08 | 15 |
nucleus pulposus cell of intervertebral disc | 6.59e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
perirenal fat | 2.59e-11 | 2 |
nucleus pulposus | 6.59e-07 | 3 |
axial mesoderm | 6.59e-07 | 3 |
notochord | 6.59e-07 | 3 |
chordamesoderm | 6.59e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.