FFCP PHASE1:Hg19::chr4:174254309..174254358,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1519|description=CAGE_peak_at_chr4:174254309..174254358,-|id=chr4:174254309..174254358,-|ontology_enrichment_celltype=CL:0002032!4.05e-10!165;CL:0000837!4.05e-10!165;CL:0000037!9.86e-10!172;CL:0000566!9.86e-10!172;CL:0000988!3.17e-08!182|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=CL:0000037,2.11e-11,168;CL:0002032,2.38e-11,161;CL:0000837,2.38e-11,161;CL:0000988,2.02e-10,177;CL:0000542,3.57e-07,53;CL:0000051,3.57e-07,53|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:162!9.08e-32!235;DOID:14566!2.49e-30!239;DOID:2531!4.74e-21!51;DOID:0060083!4.74e-21!51;DOID:1240!5.30e-17!39;DOID:0050686!2.15e-16!137;DOID:0050687!3.94e-14!143;DOID:8692!2.35e-12!31;DOID:305!4.26e-10!106|ontology_enrichment_disease_v019=DOID:1240;9.91e-18;39!DOID:2531;1.65e-16;51!DOID:0060083;1.65e-16;51!DOID:8692;3.54e-16;31!DOID:0060058;3.57e-07;10|ontology_enrichment_disease_v019_2=DOID:162,3.51e-29,235;DOID:14566,1.24e-27,239;DOID:2531,2.59e-27,51;DOID:0060083,2.59e-27,51;DOID:1240,1.61e-23,39;DOID:0050686,2.68e-17,137;DOID:8692,8.19e-17,31;DOID:0050687,7.10e-11,143;DOID:0060058,3.76e-07,10;DOID:305,4.14e-07,106|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0.261185628199839,0.737201809504527,0,0.218441372130172,0.263766978228454,0.247532705920093,0.994192127183747,0,0,0,0.487932798790507,0,0.204000691244253,0.313454721478088,0.85870796139317,4.37998160233229,3.38965126905968,5.8074188368443,3.03772180964799,3.06972047123349,0.393364276848904,1.15148819429164,0.464448369948228,0,0,0,3.79589282843478,2.13253848731132,1.46800219667424,0,1.00272223735071,0.651032612147555,0,0.32389366601898,0,2.61716829803216,1.13362783106643,2.18325655069035,1.16214518452842,1.6446715520873,0.309706370895104,0.575384784644301,0.512321413058201,0,1.37898272294647,0,0,1.50593871634084,1.09162460023138,0.674170453335254,0.918251677112708,0.320929027076094,0,0.659702600373432,1.99463657621632,0.852449501065388,1.16083695451434,1.13477044938228,0.622822248995575,0.502497330513487,1.5644487552606,0.65156653411535,2.42159801053347,0.368277635987565,0.316462387440884,0.845021145247767,0.425208599930087,0.209658645508376,0.673971786878971,0.300353785683013,1.6072558669708,0.570025487482497,0.39783335439818,0,1.75996244461323,0.546138611262131,0,0.426730222566507,0.400395987036012,0,0,0,0,0,0.382273228125229,0,0,1.05353633910031,0.590129310341499,1.57204305099666,2.05601498999509,0.334372990781356,1.62961133316795,1.4203434172042,0,1.55974639639243,1.76763544484902,1.99380505125259,0.812411591295047,2.0494611156108,3.25148368899696,4.60426132890293,2.48715016007264,1.44901542867526,0.741432815810302,0.535081656179426,1.04535523804977,2.03956816855619,1.53288197440768,0,2.02415753615602,0.318565414324097,0,0,0.150575119077773,0.127986611154418,0,0,0,0.403213486449465,2.67440195783507,2.17236605824198,0,0,0,0.361439152384566,0,0.289693037921647,0,0,2.17430079477356,2.21729397462564,2.89854792787316,0.130979075497713,0,1.11235332835329,0,0,0.132957960518865,0,0,0,0,0,0.347140501607594,0.56530794192401,0,0.825354125820202,0,0,0,0,0,0,0.976248230192678,0,0,0.892997282840798,0.673588117878509,1.46394924628319,0,0,0.916008719652036,1.31780417436063,3.87780264148325,0.872188104285069,0.496971951695318,1.13967460498122,0,0.573673241497627,1.41867352879343,0.560677600142307,0,0.24666754841716,0,0.538842688278752,0.326923806226917,0.151357427644931,0,0,1.24864030732128,0.570471821544449,0.448346041655403,0.939475989150119,0.971237666208789,1.26405726032024,0,3.31652656741774,0.413303124703062,0,0.989067717114227,0,0,1.0100166837244,3.00284447692714,0.831192346452549,1.75591048352335,0.30648779579902,0.150238058906597,0.453728732640084,1.4351170855109,0.427114777637135,0.847727604638247,0,0.515262646192195,0.772921620136887,0.18611685633159,0.506328996723799,0.292311015483596,0.252433774244115,0.368199594569197,0.161646056818812,0.710019185033229,0.604512589365842,1.52604533079439,0.193260853163297,0,0,2.92736894711029,1.59035721985782,2.20768491452085,2.90250954043037,2.27088765788066,3.28479623168247,0,1.28648187638577,1.38134921352481,0.928735856063958,0,1.30137480043828,0.674338760312407,2.41011029883482,0.992645754591546,0.871517776369625,0.474541238222193,1.07865046528132,0.196221465125346,1.53898862778556,0,0,0,0,0,0.982827216677626,0.590789906681404,10.153651286537,0.245976877086227,0.171567810298526,0,0,1.80952150340936,0.370353780634118,0,0,2.88662684050547,0,0,0.288732895522148,0.925971025153221,0.570762456703795,0.790204397959275,1.71697232418975,0.246217006087397,0.234004265139238,0.891786973732369,0,0.16798212819886,0.141775097242386,0.626909658919938,0.871901815541886,1.15014803749563,0,0.704387472105808,0,0.576479813667846,0.126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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1519 | |||
|description=CAGE_peak_at_chr4:174254309..174254358,- | |||
|id=chr4:174254309..174254358,- | |||
|ontology_enrichment_celltype=CL:0002032!4.05e-10!165;CL:0000837!4.05e-10!165;CL:0000037!9.86e-10!172;CL:0000566!9.86e-10!172;CL:0000988!3.17e-08!182 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.11e-11,168;CL:0002032,2.38e-11,161;CL:0000837,2.38e-11,161;CL:0000988,2.02e-10,177;CL:0000542,3.57e-07,53;CL:0000051,3.57e-07,53 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!9.08e-32!235;DOID:14566!2.49e-30!239;DOID:2531!4.74e-21!51;DOID:0060083!4.74e-21!51;DOID:1240!5.30e-17!39;DOID:0050686!2.15e-16!137;DOID:0050687!3.94e-14!143;DOID:8692!2.35e-12!31;DOID:305!4.26e-10!106 | |||
|ontology_enrichment_disease_v019=DOID:1240;9.91e-18;39!DOID:2531;1.65e-16;51!DOID:0060083;1.65e-16;51!DOID:8692;3.54e-16;31!DOID:0060058;3.57e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:162,3.51e-29,235;DOID:14566,1.24e-27,239;DOID:2531,2.59e-27,51;DOID:0060083,2.59e-27,51;DOID:1240,1.61e-23,39;DOID:0050686,2.68e-17,137;DOID:8692,8.19e-17,31;DOID:0050687,7.10e-11,143;DOID:0060058,3.76e-07,10;DOID:305,4.14e-07,106 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p@chr4:174254309..174254358,- | |||
}} |
Revision as of 03:23, 13 September 2013
Short description: | p@chr4:174254309..174254358, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:174254309..174254358, - |
Coexpression cluster: | C1519_diffuse_acute_chronic_NK_testicular_Reticulocytes_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 2.11e-11 | 168 |
hematopoietic oligopotent progenitor cell | 2.38e-11 | 161 |
hematopoietic multipotent progenitor cell | 2.38e-11 | 161 |
hematopoietic cell | 2.02e-10 | 177 |
lymphocyte | 3.57e-07 | 53 |
common lymphoid progenitor | 3.57e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
cancer | 3.51e-29 | 235 |
disease of cellular proliferation | 1.24e-27 | 239 |
hematologic cancer | 2.59e-27 | 51 |
immune system cancer | 2.59e-27 | 51 |
leukemia | 1.61e-23 | 39 |
organ system cancer | 2.68e-17 | 137 |
myeloid leukemia | 8.19e-17 | 31 |
cell type cancer | 7.10e-11 | 143 |
lymphoma | 3.76e-07 | 10 |
carcinoma | 4.14e-07 | 106 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.