FFCP PHASE1:Hg19::chr4:90816452..90816465,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=22915|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7178|TSSclassifier=N|UniProt=|association_with_transcript=329bp_to_AB385146,HQ258009_5end|coexpression_cluster_id=C1946|description=CAGE_peak_5_at_MMRN1_5end|id=chr4:90816452..90816465,+|ontology_enrichment_celltype=CL:0002139!1.16e-30!24;CL:0000071!1.88e-22!18;CL:0002546!1.88e-22!18;CL:0000115!2.99e-19!35;CL:0002078!3.29e-14!44;CL:0002543!4.77e-10!6;CL:0000213!8.36e-10!57;CL:0000215!8.36e-10!57;CL:0005020!8.81e-10!6;CL:0002138!8.81e-10!6;CL:0005022!8.81e-10!6;CL:0002544!8.97e-10!6;CL:0000945!9.78e-10!24;CL:0000826!9.78e-10!24;CL:1000413!1.02e-08!9;CL:0000784!1.56e-08!3;CL:0002618!7.03e-08!3;CL:0002144!1.11e-07!3|ontology_enrichment_celltype_v019=CL:0000784;3.42e-25;3!CL:0002139;7.70e-20;24!CL:0002138;1.80e-12;6!CL:0000945;1.13e-11;24!CL:0000071;9.98e-11;18!CL:0000115;1.94e-09;36!CL:0000946;3.67e-09;1!CL:0000786;3.67e-09;1!CL:0002078;7.32e-09;45!CL:0000451;2.98e-07;10|ontology_enrichment_celltype_v019_2=CL:0000784,3.03e-25,3;CL:0002139,7.05e-20,24;CL:0000115,6.46e-13,36;CL:0005020,1.95e-12,6;CL:0002138,1.95e-12,6;CL:0005022,1.95e-12,6;CL:0000945,9.91e-12,24;CL:0000826,9.91e-12,24;CL:0000071,8.90e-11,18;CL:0002546,8.90e-11,18;CL:0002078,3.98e-10,45;CL:0000946,3.53e-09,1;CL:0000786,3.53e-09,1;CL:0000980,3.53e-09,1;CL:0000213,1.26e-07,58;CL:0000215,1.26e-07,58;CL:0000451,2.89e-07,10|ontology_enrichment_development_v019=CL:0005022;1.80e-12;6!CL:0002546;9.98e-11;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001986!1.88e-22!18;UBERON:0004638!1.88e-22!18;UBERON:0004852!1.88e-22!18;UBERON:0000487!1.15e-17!22;UBERON:0006914!4.32e-15!25;UBERON:0007023!1.02e-09!115;UBERON:0001638!5.12e-09!9;UBERON:0003920!5.12e-09!9;UBERON:0004582!5.12e-09!9;UBERON:0002298!5.99e-09!8;UBERON:0003915!1.02e-08!9;UBERON:0004700!1.02e-08!9;UBERON:0001917!1.02e-08!9;UBERON:0000055!3.31e-08!69;UBERON:0002465!1.07e-07!10;UBERON:0001915!1.11e-07!3;UBERON:0001982!1.11e-07!3;UBERON:0001473!3.27e-07!8;UBERON:0004536!3.27e-07!8;UBERON:0006558!3.27e-07!8;UBERON:0006331!7.13e-07!3|ontology_enrichment_uberon_v019=UBERON:0004638;9.98e-11;18!UBERON:0001986;9.98e-11;18!UBERON:0004852;9.98e-11;18!UBERON:0001473;1.74e-09;8!UBERON:0004536;1.74e-09;8!UBERON:0006558;1.74e-09;8!UBERON:0000487;9.51e-09;22!UBERON:0002465;1.10e-07;10!UBERON:0006914;1.12e-07;25|ontology_enrichment_uberon_v019_2=UBERON:0004638,8.90e-11,18;UBERON:0001986,8.90e-11,18;UBERON:0004852,8.90e-11,18;UBERON:0001473,1.85e-09,8;UBERON:0004536,1.85e-09,8;UBERON:0006558,1.85e-09,8;UBERON:0000487,8.66e-09,22;UBERON:0006914,1.03e-07,25;UBERON:0002465,1.16e-07,10|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74425688164961,2.95562122019805,3.62069594042925,0,0,0,0,0,0,0.387336002901508,0,0.880801318004542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,1.63841583378639,0,0.853460445133014,0.400395987036012,0,0,2.86216126360609,0,0.587237189370939,0,3.96513985737078,0,0,0,0,0,0.501559486172034,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.33886874027479,2.85997455390064,2.97166001063652,0.79504962946682,0.860234595106124,0.347140501607594,1.13061588384802,0,0.275118041940067,0,1.03366703667732,2.84613010149368,0,0.402829317109147,1.52054421143703,0.732186172644509,1.10298924103761,0,1.96459402224975,0.673588117878509,0.675668882899933,1.53316637465883,0,0.916008719652036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288732895522148,0.462985512576611,1.71228737011138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,1.06824071127473,0,0,0,0,0,0,0.199579371432817,0.957526850661834,0.211673582723883,0,0.280797178113459,0,0,0,2.20079311142084,0,0,0,0,0,0,0,0,4.45449878232388,1.23087398947712,1.08182271390393,0,0,0,0.146508179271894,0.121360521749513,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0.31900115973192,0,0,0,0.784901281975124,0,0,0,0,0,0.794682894901893,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,12.8280987705826,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=22915 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7178 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=329bp_to_AB385146,HQ258009_5end | |||
|coexpression_cluster_id=C1946 | |||
|description=CAGE_peak_5_at_MMRN1_5end | |||
|id=chr4:90816452..90816465,+ | |||
|ontology_enrichment_celltype=CL:0002139!1.16e-30!24;CL:0000071!1.88e-22!18;CL:0002546!1.88e-22!18;CL:0000115!2.99e-19!35;CL:0002078!3.29e-14!44;CL:0002543!4.77e-10!6;CL:0000213!8.36e-10!57;CL:0000215!8.36e-10!57;CL:0005020!8.81e-10!6;CL:0002138!8.81e-10!6;CL:0005022!8.81e-10!6;CL:0002544!8.97e-10!6;CL:0000945!9.78e-10!24;CL:0000826!9.78e-10!24;CL:1000413!1.02e-08!9;CL:0000784!1.56e-08!3;CL:0002618!7.03e-08!3;CL:0002144!1.11e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000784;3.42e-25;3!CL:0002139;7.70e-20;24!CL:0002138;1.80e-12;6!CL:0000945;1.13e-11;24!CL:0000071;9.98e-11;18!CL:0000115;1.94e-09;36!CL:0000946;3.67e-09;1!CL:0000786;3.67e-09;1!CL:0002078;7.32e-09;45!CL:0000451;2.98e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,3.03e-25,3;CL:0002139,7.05e-20,24;CL:0000115,6.46e-13,36;CL:0005020,1.95e-12,6;CL:0002138,1.95e-12,6;CL:0005022,1.95e-12,6;CL:0000945,9.91e-12,24;CL:0000826,9.91e-12,24;CL:0000071,8.90e-11,18;CL:0002546,8.90e-11,18;CL:0002078,3.98e-10,45;CL:0000946,3.53e-09,1;CL:0000786,3.53e-09,1;CL:0000980,3.53e-09,1;CL:0000213,1.26e-07,58;CL:0000215,1.26e-07,58;CL:0000451,2.89e-07,10 | |||
|ontology_enrichment_development_v019=CL:0005022;1.80e-12;6!CL:0002546;9.98e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!1.88e-22!18;UBERON:0004638!1.88e-22!18;UBERON:0004852!1.88e-22!18;UBERON:0000487!1.15e-17!22;UBERON:0006914!4.32e-15!25;UBERON:0007023!1.02e-09!115;UBERON:0001638!5.12e-09!9;UBERON:0003920!5.12e-09!9;UBERON:0004582!5.12e-09!9;UBERON:0002298!5.99e-09!8;UBERON:0003915!1.02e-08!9;UBERON:0004700!1.02e-08!9;UBERON:0001917!1.02e-08!9;UBERON:0000055!3.31e-08!69;UBERON:0002465!1.07e-07!10;UBERON:0001915!1.11e-07!3;UBERON:0001982!1.11e-07!3;UBERON:0001473!3.27e-07!8;UBERON:0004536!3.27e-07!8;UBERON:0006558!3.27e-07!8;UBERON:0006331!7.13e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;9.98e-11;18!UBERON:0001986;9.98e-11;18!UBERON:0004852;9.98e-11;18!UBERON:0001473;1.74e-09;8!UBERON:0004536;1.74e-09;8!UBERON:0006558;1.74e-09;8!UBERON:0000487;9.51e-09;22!UBERON:0002465;1.10e-07;10!UBERON:0006914;1.12e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,8.90e-11,18;UBERON:0001986,8.90e-11,18;UBERON:0004852,8.90e-11,18;UBERON:0001473,1.85e-09,8;UBERON:0004536,1.85e-09,8;UBERON:0006558,1.85e-09,8;UBERON:0000487,8.66e-09,22;UBERON:0006914,1.03e-07,25;UBERON:0002465,1.16e-07,10 | |||
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|short_description=p5@MMRN1 | |||
}} |
Revision as of 12:19, 13 September 2013
Short description: | p5@MMRN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_MMRN1_5end |
Coexpression cluster: | C1946_gastric_acute_rhabdomyosarcoma_Dendritic_Endothelial_B_Wilms |
Association with transcript: | 329bp_to_AB385146, HQ258009_5end |
EntrezGene: | MMRN1 |
HGNC: | 7178 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 3.03e-25 | 3 |
endothelial cell of vascular tree | 7.05e-20 | 24 |
endothelial cell | 6.46e-13 | 36 |
lymphangioblast | 1.95e-12 | 6 |
endothelial cell of lymphatic vessel | 1.95e-12 | 6 |
vascular lymphangioblast | 1.95e-12 | 6 |
lymphocyte of B lineage | 9.91e-12 | 24 |
pro-B cell | 9.91e-12 | 24 |
blood vessel endothelial cell | 8.90e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.90e-11 | 18 |
meso-epithelial cell | 3.98e-10 | 45 |
antibody secreting cell | 3.53e-09 | 1 |
plasma cell | 3.53e-09 | 1 |
plasmablast | 3.53e-09 | 1 |
lining cell | 1.26e-07 | 58 |
barrier cell | 1.26e-07 | 58 |
dendritic cell | 2.89e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 8.90e-11 | 18 |
endothelium | 8.90e-11 | 18 |
cardiovascular system endothelium | 8.90e-11 | 18 |
lymphatic vessel | 1.85e-09 | 8 |
lymph vasculature | 1.85e-09 | 8 |
lymphatic part of lymphoid system | 1.85e-09 | 8 |
simple squamous epithelium | 8.66e-09 | 22 |
squamous epithelium | 1.03e-07 | 25 |
lymphoid system | 1.16e-07 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.