FFCP PHASE1:Hg19::chr4:88901534..88901556,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6696|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=11255|TSSclassifier=N|UniProt=F2YBS4|association_with_transcript=0bp_to_HQ874460_5end|coexpression_cluster_id=C455|description=CAGE_peak_6_at_SPP1_5end|id=chr4:88901534..88901556,+|ontology_enrichment_celltype=CL:0000235!8.76e-07!10|ontology_enrichment_celltype_v019=CL:0000235;3.15e-59;6!CL:0002149;2.40e-10;6!CL:0002255;2.40e-10;6!CL:0000473;5.26e-08;39!CL:0000234;5.26e-08;39|ontology_enrichment_celltype_v019_2=CL:0000235,3.36e-59,6;CL:0002149,2.29e-10,6;CL:0002255,2.29e-10,6;CL:0002194,2.76e-08,59;CL:0000576,2.76e-08,59;CL:0000040,2.76e-08,59;CL:0000559,2.76e-08,59;CL:0002009,5.24e-08,61;CL:0000473,1.94e-07,48;CL:0000234,1.94e-07,48;CL:0000839,2.20e-07,66;CL:0000557,2.85e-07,67;CL:0000766,9.48e-07,72|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:4468;5.24e-29;2!DOID:3001;2.40e-10;6!DOID:120;1.26e-08;27!DOID:193;4.79e-08;29|ontology_enrichment_disease_v019_2=DOID:4468,3.94e-29,2;DOID:3001,2.29e-10,6;DOID:120,1.19e-08,27;DOID:193,4.53e-08,29|ontology_enrichment_uberon=UBERON:0001049!2.56e-14!57;UBERON:0005068!2.56e-14!57;UBERON:0006241!2.56e-14!57;UBERON:0007135!2.56e-14!57;UBERON:0001017!2.47e-12!82;UBERON:0002780!2.80e-12!41;UBERON:0001890!2.80e-12!41;UBERON:0006240!2.80e-12!41;UBERON:0003080!6.81e-12!42;UBERON:0000073!9.37e-12!94;UBERON:0001016!9.37e-12!94;UBERON:0005743!1.81e-11!86;UBERON:0003075!1.84e-11!86;UBERON:0007284!1.84e-11!86;UBERON:0002616!6.58e-11!59;UBERON:0002346!1.14e-10!90;UBERON:0003056!4.43e-10!61;UBERON:0000955!1.60e-09!69;UBERON:0006238!1.60e-09!69;UBERON:0002791!1.02e-08!33;UBERON:0002020!1.55e-08!34;UBERON:0003528!1.55e-08!34;UBERON:0001893!2.19e-08!34;UBERON:0007023!4.98e-08!115;UBERON:0002771!1.14e-07!3;UBERON:0000956!4.25e-07!25;UBERON:0000203!4.25e-07!25|ontology_enrichment_uberon_v019=UBERON:0002038;2.06e-15;1!UBERON:0009661;2.06e-15;1!UBERON:0002950;2.06e-15;1!UBERON:0001891;2.06e-15;1|ontology_enrichment_uberon_v019_2=UBERON:0002038,3.66e-15,1;UBERON:0009661,3.66e-15,1;UBERON:0002950,3.66e-15,1;UBERON:0001891,3.66e-15,1;UBERON:0009616,3.66e-15,1;UBERON:0010286,3.66e-15,1|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.196468613246569,0,0,0.324547393654683,0.696518949197069,1.06366368415092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23108503043699,4.91408956792399,2.0808362720422,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17217447210047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00451418286425,4.21667878966063,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,1.05499032264014,1.95879369790977,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,1.13843818411917,1.10939738410511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160317640503067,0.426905989478705,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0.157566364614447,0.164831716762333,0,0,0,0,0.136203406111576,0.160753148465019,0,0,0,0,0,0,6.30445658393585,0.157363764404994,0,0.896436696664224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66116300871345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.610131324509816,0.1251909307065,0,0.332787154610557,0.248385611765534,0,0,0.303298235083296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512483037175893,0,0,0.138258436151731,0,0,0,0,0.737318726261158,0,0,0,0.344429959321631,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.478901577171454,0.41023272848151,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0.535701835878287,0,0.606965604236632,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0.1183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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6696 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=11255 | |||
|TSSclassifier=N | |||
|UniProt=F2YBS4 | |||
|association_with_transcript=0bp_to_HQ874460_5end | |||
|coexpression_cluster_id=C455 | |||
|description=CAGE_peak_6_at_SPP1_5end | |||
|id=chr4:88901534..88901556,+ | |||
|ontology_enrichment_celltype=CL:0000235!8.76e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000235;3.15e-59;6!CL:0002149;2.40e-10;6!CL:0002255;2.40e-10;6!CL:0000473;5.26e-08;39!CL:0000234;5.26e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,3.36e-59,6;CL:0002149,2.29e-10,6;CL:0002255,2.29e-10,6;CL:0002194,2.76e-08,59;CL:0000576,2.76e-08,59;CL:0000040,2.76e-08,59;CL:0000559,2.76e-08,59;CL:0002009,5.24e-08,61;CL:0000473,1.94e-07,48;CL:0000234,1.94e-07,48;CL:0000839,2.20e-07,66;CL:0000557,2.85e-07,67;CL:0000766,9.48e-07,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4468;5.24e-29;2!DOID:3001;2.40e-10;6!DOID:120;1.26e-08;27!DOID:193;4.79e-08;29 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,3.94e-29,2;DOID:3001,2.29e-10,6;DOID:120,1.19e-08,27;DOID:193,4.53e-08,29 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.56e-14!57;UBERON:0005068!2.56e-14!57;UBERON:0006241!2.56e-14!57;UBERON:0007135!2.56e-14!57;UBERON:0001017!2.47e-12!82;UBERON:0002780!2.80e-12!41;UBERON:0001890!2.80e-12!41;UBERON:0006240!2.80e-12!41;UBERON:0003080!6.81e-12!42;UBERON:0000073!9.37e-12!94;UBERON:0001016!9.37e-12!94;UBERON:0005743!1.81e-11!86;UBERON:0003075!1.84e-11!86;UBERON:0007284!1.84e-11!86;UBERON:0002616!6.58e-11!59;UBERON:0002346!1.14e-10!90;UBERON:0003056!4.43e-10!61;UBERON:0000955!1.60e-09!69;UBERON:0006238!1.60e-09!69;UBERON:0002791!1.02e-08!33;UBERON:0002020!1.55e-08!34;UBERON:0003528!1.55e-08!34;UBERON:0001893!2.19e-08!34;UBERON:0007023!4.98e-08!115;UBERON:0002771!1.14e-07!3;UBERON:0000956!4.25e-07!25;UBERON:0000203!4.25e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0002038;2.06e-15;1!UBERON:0009661;2.06e-15;1!UBERON:0002950;2.06e-15;1!UBERON:0001891;2.06e-15;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002038,3.66e-15,1;UBERON:0009661,3.66e-15,1;UBERON:0002950,3.66e-15,1;UBERON:0001891,3.66e-15,1;UBERON:0009616,3.66e-15,1;UBERON:0010286,3.66e-15,1 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.196468613246569,0,0,0.324547393654683,0.696518949197069,1.06366368415092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23108503043699,4.91408956792399,2.0808362720422,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17217447210047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00451418286425,4.21667878966063,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,1.05499032264014,1.95879369790977,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,1.13843818411917,1.10939738410511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160317640503067,0.426905989478705,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0.157566364614447,0.164831716762333,0,0,0,0,0.136203406111576,0.160753148465019,0,0,0,0,0,0,6.30445658393585,0.157363764404994,0,0.896436696664224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66116300871345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.610131324509816,0.1251909307065,0,0.332787154610557,0.248385611765534,0,0,0.303298235083296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512483037175893,0,0,0.138258436151731,0,0,0,0,0.737318726261158,0,0,0,0.344429959321631,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.478901577171454,0.41023272848151,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0.535701835878287,0,0.606965604236632,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0.118332000730565,0.170426809518315,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0,0,0,0,0,0,0,0,1.00337708206016,0,0,0,0,0,0,0,0.378499274505237,0.109265571963696,0,0,0,0,0,0.0757786982182394,0,0.829169439458779,0.517164979309476,0,0,0,0.0620747142958579,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@SPP1 | |||
}} |
Revision as of 12:14, 13 September 2013
Short description: | p6@SPP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_SPP1_5end |
Coexpression cluster: | C455_kidney_Macrophage_clear_endometrial_Monocytederived_large_spinal |
Association with transcript: | 0bp_to_HQ874460_5end |
EntrezGene: | SPP1 |
HGNC: | 11255 |
UniProt: | F2YBS4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 3.36e-59 | 6 |
epithelial cell of uterus | 2.29e-10 | 6 |
stromal cell of endometrium | 2.29e-10 | 6 |
monopoietic cell | 2.76e-08 | 59 |
monocyte | 2.76e-08 | 59 |
monoblast | 2.76e-08 | 59 |
promonocyte | 2.76e-08 | 59 |
macrophage dendritic cell progenitor | 5.24e-08 | 61 |
defensive cell | 1.94e-07 | 48 |
phagocyte | 1.94e-07 | 48 |
myeloid lineage restricted progenitor cell | 2.20e-07 | 66 |
granulocyte monocyte progenitor cell | 2.85e-07 | 67 |
myeloid leukocyte | 9.48e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
substantia nigra | 3.66e-15 | 1 |
midbrain nucleus | 3.66e-15 | 1 |
regional part of midbrain | 3.66e-15 | 1 |
midbrain | 3.66e-15 | 1 |
presumptive midbrain | 3.66e-15 | 1 |
midbrain neural tube | 3.66e-15 | 1 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 3.94e-29 | 2 |
female reproductive endometrioid cancer | 2.29e-10 | 6 |
female reproductive organ cancer | 1.19e-08 | 27 |
reproductive organ cancer | 4.53e-08 | 29 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.