FFCP PHASE1:Hg19::chr3:196439275..196439290,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=54965 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26046 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000296333_5end | |||
|description=CAGE_peak_3_at_PIGX_5end | |||
|id=chr3:196439275..196439290,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!9.62e-17!235;DOID:14566!8.06e-16!239;DOID:0050687!8.54e-13!143;DOID:305!5.86e-11!106;DOID:0050686!3.42e-07!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.37e-16,235;DOID:14566,1.26e-15,239;DOID:0050687,1.09e-12,143;DOID:305,6.45e-11,106;DOID:0050686,4.78e-07,137 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001869;2.45e-10;32!UBERON:0003528;4.14e-10;34!UBERON:0002020;4.14e-10;34!UBERON:0002791;4.17e-10;32!UBERON:0001893;5.36e-10;34!UBERON:0002780;5.77e-09;41!UBERON:0001890;5.77e-09;41!UBERON:0000956;2.04e-08;25!UBERON:0000203;2.04e-08;25!UBERON:0002619;2.08e-08;22!UBERON:0001950;2.82e-08;20!UBERON:0000955;1.37e-07;68 | |||
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| |||
|short_description=p3@PIGX | |||
}} |
Revision as of 23:34, 12 September 2013
Short description: | p3@PIGX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_PIGX_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000296333_5end |
EntrezGene: | PIGX |
HGNC: | 26046 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 1.31e-14 | 89 |
central nervous system | 3.35e-14 | 81 |
brain | 1.53e-13 | 68 |
future brain | 1.53e-13 | 68 |
regional part of forebrain | 3.53e-12 | 41 |
forebrain | 3.53e-12 | 41 |
anterior neural tube | 3.53e-12 | 41 |
future forebrain | 3.53e-12 | 41 |
neural tube | 3.47e-11 | 56 |
neural rod | 3.47e-11 | 56 |
future spinal cord | 3.47e-11 | 56 |
neural keel | 3.47e-11 | 56 |
telencephalon | 4.94e-11 | 34 |
cerebral hemisphere | 5.64e-11 | 32 |
brain grey matter | 6.53e-11 | 34 |
gray matter | 6.53e-11 | 34 |
regional part of nervous system | 7.81e-11 | 53 |
regional part of brain | 7.81e-11 | 53 |
regional part of telencephalon | 1.37e-10 | 32 |
organ system subdivision | 2.01e-09 | 223 |
neurectoderm | 6.25e-09 | 86 |
pre-chordal neural plate | 1.70e-08 | 61 |
neural plate | 2.34e-08 | 82 |
presumptive neural plate | 2.34e-08 | 82 |
regional part of cerebral cortex | 2.88e-08 | 22 |
cerebral cortex | 4.54e-08 | 25 |
pallium | 4.54e-08 | 25 |
neocortex | 6.13e-08 | 20 |
ectoderm-derived structure | 1.73e-07 | 171 |
ectoderm | 1.73e-07 | 171 |
presumptive ectoderm | 1.73e-07 | 171 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.37e-16 | 235 |
disease of cellular proliferation | 1.26e-15 | 239 |
cell type cancer | 1.09e-12 | 143 |
carcinoma | 6.45e-11 | 106 |
organ system cancer | 4.78e-07 | 137 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.