FFCP PHASE1:Hg19::chr3:186742464..186742473,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6480|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10860|TSSclassifier=S|UniProt=C9JKG0|association_with_transcript=-2bp_to_ENST00000416235_5end|description=CAGE_peak_21_at_ST6GAL1_5end|id=chr3:186742464..186742473,+|ontology_enrichment_celltype=CL:0000542!1.85e-19!53;CL:0000051!1.85e-19!53;CL:0000838!2.32e-18!52;CL:0000791!1.02e-15!18;CL:0000789!1.02e-15!18;CL:0002420!1.02e-15!18;CL:0002419!1.02e-15!18;CL:0000790!1.02e-15!18;CL:0000625!1.73e-13!11;CL:0002087!1.32e-12!119;CL:0000084!2.51e-10!25;CL:0000827!2.51e-10!25;CL:0000738!3.25e-09!140;CL:0002031!1.17e-08!124;CL:0000945!6.46e-08!24;CL:0000826!6.46e-08!24|ontology_enrichment_celltype_v019=CL:0000625;1.79e-16;11!CL:0000791;3.82e-14;18!CL:0000789;3.82e-14;18!CL:0002419;3.82e-14;18!CL:0000084;4.73e-10;25!CL:0000895;1.17e-08;1|ontology_enrichment_celltype_v019_2=CL:0000625,9.11e-17,11;CL:0000791,2.50e-14,18;CL:0000789,2.50e-14,18;CL:0002420,2.50e-14,18;CL:0002419,2.50e-14,18;CL:0000790,2.50e-14,18;CL:0000084,3.51e-10,25;CL:0000827,3.51e-10,25;CL:0000810,1.42e-08,1;CL:0000895,1.42e-08,1;CL:0002436,1.42e-08,1;CL:0002427,1.42e-08,1;CL:0002428,1.42e-08,1;CL:0002429,1.42e-08,1;CL:0002433,1.42e-08,1;CL:0002431,1.42e-08,1;CL:0002432,1.42e-08,1|ontology_enrichment_development_v019=CL:0000790;3.82e-14;18!CL:0002427;1.17e-08;1!UBERON:0001045;1.17e-08;1!UBERON:0010115;1.17e-08;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!3.08e-24!115;UBERON:0001049!1.81e-19!57;UBERON:0005068!1.81e-19!57;UBERON:0006241!1.81e-19!57;UBERON:0007135!1.81e-19!57;UBERON:0002780!9.88e-18!41;UBERON:0001890!9.88e-18!41;UBERON:0006240!9.88e-18!41;UBERON:0003080!3.69e-17!42;UBERON:0002616!7.08e-17!59;UBERON:0001893!2.05e-14!34;UBERON:0000955!3.31e-14!69;UBERON:0006238!3.31e-14!69;UBERON:0001017!3.43e-14!82;UBERON:0002791!1.96e-13!33;UBERON:0005743!3.91e-13!86;UBERON:0002020!6.72e-13!34;UBERON:0003528!6.72e-13!34;UBERON:0003075!2.49e-12!86;UBERON:0007284!2.49e-12!86;UBERON:0001869!4.13e-12!32;UBERON:0002346!2.06e-11!90;UBERON:0000073!4.27e-11!94;UBERON:0001016!4.27e-11!94;UBERON:0003056!6.61e-10!61;UBERON:0002619!1.28e-09!22;UBERON:0000956!3.65e-08!25;UBERON:0000203!3.65e-08!25;UBERON:0000153!6.52e-08!129;UBERON:0007811!6.52e-08!129;UBERON:0001950!1.74e-07!20;UBERON:0000178!6.72e-07!15;UBERON:0000179!6.72e-07!15;UBERON:0000463!6.72e-07!15|ontology_enrichment_uberon_v019=UBERON:0000007;2.34e-16;2!UBERON:0002360;1.33e-15;2!UBERON:0000094;1.33e-15;2!UBERON:0010743;1.33e-15;2!UBERON:0002363;1.17e-08;1!UBERON:0001154;1.17e-08;1!UBERON:0001153;1.17e-08;1!UBERON:0009854;1.17e-08;1!UBERON:0003296;1.27e-08;4!UBERON:0010133;1.27e-08;4!UBERON:0000178;5.43e-08;15!UBERON:0000179;5.43e-08;15!UBERON:0000463;5.43e-08;15|ontology_enrichment_uberon_v019_2=UBERON:0000007,2.35e-16,2;UBERON:0002360,1.93e-15,2;UBERON:0000094,1.93e-15,2;UBERON:0010743,1.93e-15,2;UBERON:0002363,1.22e-08,1;UBERON:0007645,1.22e-08,1;UBERON:0007647,1.22e-08,1;UBERON:0010115,1.22e-08,1;UBERON:0003296,1.27e-08,4;UBERON:0010133,1.27e-08,4;UBERON:0001154,1.53e-08,1;UBERON:0001153,1.53e-08,1;UBERON:0001045,1.53e-08,1;UBERON:0000178,6.93e-08,15;UBERON:0000179,6.93e-08,15;UBERON:0000463,6.93e-08,15|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.328402357799783,0.393553906568396,0,0,0,0,0,0,0.154934401160603,0.142169232487422,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0.28769239232215,0.256160706529101,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0.889509253863555,0,0,0.574752439954483,0,0.954053754535364,0.569212969109448,0,0,0,0,0,0,0.393010762749165,0.822405995998037,2.00623794468814,0.32592226663359,0,1.94826728407911,0.668462741311041,0,0.221533894583621,0.270803863765016,0.768547918354051,1.04047478047903,0.986627427622057,1.38175008892924,3.18783394308558,2.81744470007915,3.74557159325598,5.22677619024884,0.566546713487831,1.14966148080576,0.68725489096526,1.51811815211702,1.91139248594458,1.95325036156926,0.950452044448374,0.602300476311091,1.79181255616186,1.24930726552346,1.18388626022008,0.821127996921047,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.797747763113191,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,1.03384013061444,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6480 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10860 | |||
|TSSclassifier=S | |||
|UniProt=C9JKG0 | |||
|association_with_transcript=-2bp_to_ENST00000416235_5end | |||
|description=CAGE_peak_21_at_ST6GAL1_5end | |||
|id=chr3:186742464..186742473,+ | |||
|ontology_enrichment_celltype=CL:0000542!1.85e-19!53;CL:0000051!1.85e-19!53;CL:0000838!2.32e-18!52;CL:0000791!1.02e-15!18;CL:0000789!1.02e-15!18;CL:0002420!1.02e-15!18;CL:0002419!1.02e-15!18;CL:0000790!1.02e-15!18;CL:0000625!1.73e-13!11;CL:0002087!1.32e-12!119;CL:0000084!2.51e-10!25;CL:0000827!2.51e-10!25;CL:0000738!3.25e-09!140;CL:0002031!1.17e-08!124;CL:0000945!6.46e-08!24;CL:0000826!6.46e-08!24 | |||
|ontology_enrichment_celltype_v019=CL:0000625;1.79e-16;11!CL:0000791;3.82e-14;18!CL:0000789;3.82e-14;18!CL:0002419;3.82e-14;18!CL:0000084;4.73e-10;25!CL:0000895;1.17e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,9.11e-17,11;CL:0000791,2.50e-14,18;CL:0000789,2.50e-14,18;CL:0002420,2.50e-14,18;CL:0002419,2.50e-14,18;CL:0000790,2.50e-14,18;CL:0000084,3.51e-10,25;CL:0000827,3.51e-10,25;CL:0000810,1.42e-08,1;CL:0000895,1.42e-08,1;CL:0002436,1.42e-08,1;CL:0002427,1.42e-08,1;CL:0002428,1.42e-08,1;CL:0002429,1.42e-08,1;CL:0002433,1.42e-08,1;CL:0002431,1.42e-08,1;CL:0002432,1.42e-08,1 | |||
|ontology_enrichment_development_v019=CL:0000790;3.82e-14;18!CL:0002427;1.17e-08;1!UBERON:0001045;1.17e-08;1!UBERON:0010115;1.17e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.08e-24!115;UBERON:0001049!1.81e-19!57;UBERON:0005068!1.81e-19!57;UBERON:0006241!1.81e-19!57;UBERON:0007135!1.81e-19!57;UBERON:0002780!9.88e-18!41;UBERON:0001890!9.88e-18!41;UBERON:0006240!9.88e-18!41;UBERON:0003080!3.69e-17!42;UBERON:0002616!7.08e-17!59;UBERON:0001893!2.05e-14!34;UBERON:0000955!3.31e-14!69;UBERON:0006238!3.31e-14!69;UBERON:0001017!3.43e-14!82;UBERON:0002791!1.96e-13!33;UBERON:0005743!3.91e-13!86;UBERON:0002020!6.72e-13!34;UBERON:0003528!6.72e-13!34;UBERON:0003075!2.49e-12!86;UBERON:0007284!2.49e-12!86;UBERON:0001869!4.13e-12!32;UBERON:0002346!2.06e-11!90;UBERON:0000073!4.27e-11!94;UBERON:0001016!4.27e-11!94;UBERON:0003056!6.61e-10!61;UBERON:0002619!1.28e-09!22;UBERON:0000956!3.65e-08!25;UBERON:0000203!3.65e-08!25;UBERON:0000153!6.52e-08!129;UBERON:0007811!6.52e-08!129;UBERON:0001950!1.74e-07!20;UBERON:0000178!6.72e-07!15;UBERON:0000179!6.72e-07!15;UBERON:0000463!6.72e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;2.34e-16;2!UBERON:0002360;1.33e-15;2!UBERON:0000094;1.33e-15;2!UBERON:0010743;1.33e-15;2!UBERON:0002363;1.17e-08;1!UBERON:0001154;1.17e-08;1!UBERON:0001153;1.17e-08;1!UBERON:0009854;1.17e-08;1!UBERON:0003296;1.27e-08;4!UBERON:0010133;1.27e-08;4!UBERON:0000178;5.43e-08;15!UBERON:0000179;5.43e-08;15!UBERON:0000463;5.43e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,2.35e-16,2;UBERON:0002360,1.93e-15,2;UBERON:0000094,1.93e-15,2;UBERON:0010743,1.93e-15,2;UBERON:0002363,1.22e-08,1;UBERON:0007645,1.22e-08,1;UBERON:0007647,1.22e-08,1;UBERON:0010115,1.22e-08,1;UBERON:0003296,1.27e-08,4;UBERON:0010133,1.27e-08,4;UBERON:0001154,1.53e-08,1;UBERON:0001153,1.53e-08,1;UBERON:0001045,1.53e-08,1;UBERON:0000178,6.93e-08,15;UBERON:0000179,6.93e-08,15;UBERON:0000463,6.93e-08,15 | |||
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|short_description=p21@ST6GAL1 | |||
}} |
Revision as of 23:11, 12 September 2013
Short description: | p21@ST6GAL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_21_at_ST6GAL1_5end |
Coexpression cluster: | NA |
Association with transcript: | -2bp_to_ENST00000416235_5end |
EntrezGene: | ST6GAL1 |
HGNC: | 10860 |
UniProt: | C9JKG0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 9.11e-17 | 11 |
mature alpha-beta T cell | 2.50e-14 | 18 |
alpha-beta T cell | 2.50e-14 | 18 |
immature T cell | 2.50e-14 | 18 |
mature T cell | 2.50e-14 | 18 |
immature alpha-beta T cell | 2.50e-14 | 18 |
T cell | 3.51e-10 | 25 |
pro-T cell | 3.51e-10 | 25 |
CD4-positive, alpha-beta thymocyte | 1.42e-08 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 1.42e-08 | 1 |
mature CD4 single-positive thymocyte | 1.42e-08 | 1 |
resting double-positive thymocyte | 1.42e-08 | 1 |
double-positive blast | 1.42e-08 | 1 |
CD69-positive double-positive thymocyte | 1.42e-08 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 1.42e-08 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 1.42e-08 | 1 |
CD24-positive, CD4 single-positive thymocyte | 1.42e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 2.35e-16 | 2 |
meninx | 1.93e-15 | 2 |
membrane organ | 1.93e-15 | 2 |
meningeal cluster | 1.93e-15 | 2 |
dura mater | 1.22e-08 | 1 |
future meninx | 1.22e-08 | 1 |
ectomeninx | 1.22e-08 | 1 |
future dura mater | 1.22e-08 | 1 |
gland of diencephalon | 1.27e-08 | 4 |
neuroendocrine gland | 1.27e-08 | 4 |
vermiform appendix | 1.53e-08 | 1 |
caecum | 1.53e-08 | 1 |
midgut | 1.53e-08 | 1 |
blood | 6.93e-08 | 15 |
haemolymphatic fluid | 6.93e-08 | 15 |
organism substance | 6.93e-08 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.