FFCP PHASE1:Hg19::chr3:150264169..150264180,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=27230|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10759|TSSclassifier=S|UniProt=C9JUH5|association_with_transcript=105bp_to_ENST00000491660_5end|coexpression_cluster_id=C0|description=CAGE_peak_8_at_SERP1_5end|id=chr3:150264169..150264180,-|ontology_enrichment_celltype=CL:0000766!3.25e-41!76;CL:0000557!4.12e-37!71;CL:0000763!6.59e-37!112;CL:0000049!6.59e-37!112;CL:0000839!1.95e-35!70;CL:0002009!3.07e-34!65;CL:0002194!6.67e-34!63;CL:0000576!6.67e-34!63;CL:0000040!6.67e-34!63;CL:0000559!6.67e-34!63;CL:0000037!5.94e-33!172;CL:0000566!5.94e-33!172;CL:0000738!1.99e-32!140;CL:0000988!1.94e-31!182;CL:0002032!3.37e-30!165;CL:0000837!3.37e-30!165;CL:0002057!3.15e-28!42;CL:0000860!9.52e-28!45;CL:0002031!2.58e-25!124;CL:0002087!9.60e-25!119;CL:0000134!4.80e-12!358;CL:0002320!7.48e-11!365;CL:0000048!1.42e-09!430;CL:0000723!1.48e-09!436;CL:0000034!1.87e-09!444;CL:0000219!4.45e-08!390|ontology_enrichment_celltype_v019=CL:0000860;1.40e-38;33!CL:0002057;1.40e-38;33!CL:0000473;8.20e-37;39!CL:0000234;8.20e-37;39!CL:0000576;2.77e-35;48!CL:0000766;4.44e-32;69!CL:0000763;8.51e-20;100!CL:0000738;1.91e-11;136!CL:0002087;1.35e-10;104!CL:0000094;4.37e-10;8!CL:0000988;1.25e-08;177!CL:0002393;4.46e-08;6!CL:0002397;4.46e-08;6!CL:0000235;5.93e-07;6!CL:0000081;9.06e-07;11|ontology_enrichment_celltype_v019_2=CL:0000766,2.08e-78,72;CL:0000557,4.51e-67,67;CL:0000839,6.77e-66,66;CL:0002194,1.84e-64,59;CL:0000576,1.84e-64,59;CL:0000040,1.84e-64,59;CL:0000559,1.84e-64,59;CL:0000763,3.73e-64,108;CL:0000049,3.73e-64,108;CL:0002009,1.26e-61,61;CL:0000473,9.23e-58,48;CL:0000234,9.23e-58,48;CL:0000860,2.38e-52,42;CL:0002057,2.38e-52,42;CL:0000037,2.46e-49,168;CL:0000738,6.14e-48,136;CL:0000988,3.99e-45,177;CL:0002032,5.21e-45,161;CL:0000837,5.21e-45,161;CL:0002087,4.25e-38,115;CL:0002031,1.68e-36,120;CL:0000134,7.59e-14,354;CL:0002320,5.44e-13,361;CL:0000048,2.24e-11,427;CL:0002393,3.40e-11,9;CL:0002397,3.40e-11,9;CL:0000723,3.66e-11,433;CL:0000034,3.88e-11,441;CL:0000219,8.02e-11,386;CL:0000094,2.61e-10,8;CL:0000081,6.38e-07,11;CL:0000235,9.46e-07,6|ontology_enrichment_development_v019=CL:0002057;1.80e-37;42!CL:0000049;2.43e-18;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!9.36e-38!102;UBERON:0003061!9.36e-38!102;UBERON:0002193!9.87e-37!112;UBERON:0002371!1.66e-32!80;UBERON:0001474!9.68e-31!86;UBERON:0002405!2.22e-24!115;UBERON:0004765!2.23e-24!101;UBERON:0001434!2.23e-24!101;UBERON:0003081!2.05e-19!216;UBERON:0002204!3.30e-14!167;UBERON:0002384!1.58e-09!375;UBERON:0000926!3.00e-08!448;UBERON:0004120!3.00e-08!448;UBERON:0006603!3.00e-08!448|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.55e-60,98;UBERON:0003061,1.55e-60,98;UBERON:0002371,2.85e-60,76;UBERON:0002193,1.97e-57,108;UBERON:0001474,8.33e-56,82;UBERON:0002405,1.44e-51,93;UBERON:0004765,1.17e-48,90;UBERON:0001434,1.16e-42,100;UBERON:0003081,1.48e-34,203;UBERON:0002204,6.15e-26,167;UBERON:0000926,9.63e-22,315;UBERON:0004120,9.63e-22,315;UBERON:0006603,9.63e-22,315;UBERON:0002384,7.72e-12,371|phase1_expression=0.54503513781167,0.856402095563933,0.563817616383885,1.0007329835313,3.5756887554183,0.872338524100369,0,0,0.522371256399677,0.245733936501509,0,0,0,0,0.331397375727916,0.672325146451775,1.80808358407193,0.730310090387373,0,0.246242116153576,0.204000691244253,0,0,0,0.251085279189606,0.305653622991805,0.164201178899891,0.157421562627358,2.75354993794233,1.53531759238885,4.64448369948228,0.919421224478927,0.90361775633475,0,1.16200800870452,0.142169232487422,1.46800219667424,7.20194031091441,4.41197784434312,3.90619567288533,2.68698569087909,4.21061765824673,4.89393578504954,8.43309784921475,5.66813915533214,7.76268995801012,17.4321777679263,12.3350366406548,14.5561994320699,9.20615655430881,9.22178543504762,10.8781825748749,17.9267753983042,18.0735711403471,8.12558919566051,12.4239944098119,9.27880910196676,15.5059204267108,26.6292986362685,22.7859609224026,24.9341479061626,5.27762080298746,6.98122801675712,8.09827026012119,26.9894591924583,25.5323351111013,25.5357122088186,6.28121663141858,6.77927793946262,8.68755378820467,18.7673845816344,26.5159897911047,31.0133139692067,3.59133986730301,4.46469029926591,3.14487968262564,3.59451619668784,3.45406853535464,4.17886525412408,5.70025487482497,3.58050018958362,2.73996230646951,1.75996244461323,0,0.889509253863555,0.426730222566507,0,1.14950487990897,1.32208974556972,0.954053754535364,0.569212969109448,0,1.14681968437569,0,1.12101712596307,1.05353633910031,0.196709770113833,0,1.02800749499755,0,0.32592226663359,0.473447805734733,0,0.445641827540694,0.294605907474837,0,0,0.128091319725675,0.130059347559878,0.328875809207352,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0.451725357233318,0.127986611154418,0,0.473554504088034,0.821127996921047,0.201606743224732,0.534880391567015,0.144824403882799,0,0.670700859703636,0,1.44575660953827,0.501337910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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=27230 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10759 | |||
|TSSclassifier=S | |||
|UniProt=C9JUH5 | |||
|association_with_transcript=105bp_to_ENST00000491660_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_8_at_SERP1_5end | |||
|id=chr3:150264169..150264180,- | |||
|ontology_enrichment_celltype=CL:0000766!3.25e-41!76;CL:0000557!4.12e-37!71;CL:0000763!6.59e-37!112;CL:0000049!6.59e-37!112;CL:0000839!1.95e-35!70;CL:0002009!3.07e-34!65;CL:0002194!6.67e-34!63;CL:0000576!6.67e-34!63;CL:0000040!6.67e-34!63;CL:0000559!6.67e-34!63;CL:0000037!5.94e-33!172;CL:0000566!5.94e-33!172;CL:0000738!1.99e-32!140;CL:0000988!1.94e-31!182;CL:0002032!3.37e-30!165;CL:0000837!3.37e-30!165;CL:0002057!3.15e-28!42;CL:0000860!9.52e-28!45;CL:0002031!2.58e-25!124;CL:0002087!9.60e-25!119;CL:0000134!4.80e-12!358;CL:0002320!7.48e-11!365;CL:0000048!1.42e-09!430;CL:0000723!1.48e-09!436;CL:0000034!1.87e-09!444;CL:0000219!4.45e-08!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.40e-38;33!CL:0002057;1.40e-38;33!CL:0000473;8.20e-37;39!CL:0000234;8.20e-37;39!CL:0000576;2.77e-35;48!CL:0000766;4.44e-32;69!CL:0000763;8.51e-20;100!CL:0000738;1.91e-11;136!CL:0002087;1.35e-10;104!CL:0000094;4.37e-10;8!CL:0000988;1.25e-08;177!CL:0002393;4.46e-08;6!CL:0002397;4.46e-08;6!CL:0000235;5.93e-07;6!CL:0000081;9.06e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.08e-78,72;CL:0000557,4.51e-67,67;CL:0000839,6.77e-66,66;CL:0002194,1.84e-64,59;CL:0000576,1.84e-64,59;CL:0000040,1.84e-64,59;CL:0000559,1.84e-64,59;CL:0000763,3.73e-64,108;CL:0000049,3.73e-64,108;CL:0002009,1.26e-61,61;CL:0000473,9.23e-58,48;CL:0000234,9.23e-58,48;CL:0000860,2.38e-52,42;CL:0002057,2.38e-52,42;CL:0000037,2.46e-49,168;CL:0000738,6.14e-48,136;CL:0000988,3.99e-45,177;CL:0002032,5.21e-45,161;CL:0000837,5.21e-45,161;CL:0002087,4.25e-38,115;CL:0002031,1.68e-36,120;CL:0000134,7.59e-14,354;CL:0002320,5.44e-13,361;CL:0000048,2.24e-11,427;CL:0002393,3.40e-11,9;CL:0002397,3.40e-11,9;CL:0000723,3.66e-11,433;CL:0000034,3.88e-11,441;CL:0000219,8.02e-11,386;CL:0000094,2.61e-10,8;CL:0000081,6.38e-07,11;CL:0000235,9.46e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;1.80e-37;42!CL:0000049;2.43e-18;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.36e-38!102;UBERON:0003061!9.36e-38!102;UBERON:0002193!9.87e-37!112;UBERON:0002371!1.66e-32!80;UBERON:0001474!9.68e-31!86;UBERON:0002405!2.22e-24!115;UBERON:0004765!2.23e-24!101;UBERON:0001434!2.23e-24!101;UBERON:0003081!2.05e-19!216;UBERON:0002204!3.30e-14!167;UBERON:0002384!1.58e-09!375;UBERON:0000926!3.00e-08!448;UBERON:0004120!3.00e-08!448;UBERON:0006603!3.00e-08!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.55e-60,98;UBERON:0003061,1.55e-60,98;UBERON:0002371,2.85e-60,76;UBERON:0002193,1.97e-57,108;UBERON:0001474,8.33e-56,82;UBERON:0002405,1.44e-51,93;UBERON:0004765,1.17e-48,90;UBERON:0001434,1.16e-42,100;UBERON:0003081,1.48e-34,203;UBERON:0002204,6.15e-26,167;UBERON:0000926,9.63e-22,315;UBERON:0004120,9.63e-22,315;UBERON:0006603,9.63e-22,315;UBERON:0002384,7.72e-12,371 | |||
|phase1_expression=0.54503513781167,0.856402095563933,0.563817616383885,1.0007329835313,3.5756887554183,0.872338524100369,0,0,0.522371256399677,0.245733936501509,0,0,0,0,0.331397375727916,0.672325146451775,1.80808358407193,0.730310090387373,0,0.246242116153576,0.204000691244253,0,0,0,0.251085279189606,0.305653622991805,0.164201178899891,0.157421562627358,2.75354993794233,1.53531759238885,4.64448369948228,0.919421224478927,0.90361775633475,0,1.16200800870452,0.142169232487422,1.46800219667424,7.20194031091441,4.41197784434312,3.90619567288533,2.68698569087909,4.21061765824673,4.89393578504954,8.43309784921475,5.66813915533214,7.76268995801012,17.4321777679263,12.3350366406548,14.5561994320699,9.20615655430881,9.22178543504762,10.8781825748749,17.9267753983042,18.0735711403471,8.12558919566051,12.4239944098119,9.27880910196676,15.5059204267108,26.6292986362685,22.7859609224026,24.9341479061626,5.27762080298746,6.98122801675712,8.09827026012119,26.9894591924583,25.5323351111013,25.5357122088186,6.28121663141858,6.77927793946262,8.68755378820467,18.7673845816344,26.5159897911047,31.0133139692067,3.59133986730301,4.46469029926591,3.14487968262564,3.59451619668784,3.45406853535464,4.17886525412408,5.70025487482497,3.58050018958362,2.73996230646951,1.75996244461323,0,0.889509253863555,0.426730222566507,0,1.14950487990897,1.32208974556972,0.954053754535364,0.569212969109448,0,1.14681968437569,0,1.12101712596307,1.05353633910031,0.196709770113833,0,1.02800749499755,0,0.32592226663359,0.473447805734733,0,0.445641827540694,0.294605907474837,0,0,0.128091319725675,0.130059347559878,0.328875809207352,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0.451725357233318,0.127986611154418,0,0.473554504088034,0.821127996921047,0.201606743224732,0.534880391567015,0.144824403882799,0,0.670700859703636,0,1.44575660953827,0.50133791063589,0.724232594804119,0,0.486634870302636,0,0.443458794925128,0.175669571386252,0.327447688744282,0,0,3.57002133020152,5.74628133087582,2.6591592103773,2.14641561874808,2.28797964312051,1.11437250398869,1.19257444420023,2.58070378531837,1.73570250803797,0.56530794192401,1.67799774483962,1.6507082516404,0.835979866147242,0,0,2.00832367658802,0,0,0.24406205754817,0.735326160691737,2.43042584364528,0.357198913136319,0.673588117878509,0.225222960966644,1.53316637465883,0,1.28241220751285,26.3560834872127,27.1446184903828,0.436094052142534,0.496971951695318,0.506522046658319,0,0,0.354668382198357,0.560677600142307,0,0.24666754841716,0,0.269421344139376,0.490385709340376,0,0.576175924479999,0,0,0,0,0.117434498643765,0.323745888736263,0.421352420106746,0.408308342509787,0.122834317311768,0.103325781175765,1.18800285728205,0.494533858557114,0,0.718618141816238,0.168336113954066,0.125118519871964,0,0.877955241761676,0,1.20190447125277,0.907457465280168,0.179389635688862,0.213557388818567,0.423863802319124,0.300091096084402,0.206105058476878,0,0.18611685633159,0,0.292311015483596,0,0.276149695926898,0.161646056818812,0,0.201504196455281,0.169560592310488,0,0.818238361772504,0.286804595389004,0.365921118388786,0.265059536642971,0.232387885739037,0,0.252320850875628,0,0,1.28648187638577,0,0,0,0.236613600079688,0.168584690078102,0,0,0,0,0.269662616320329,0.588664395376038,0,0,0,0.4115740113314,0,1.26755034821831,0,1.18157981336281,0.441463099414651,0.368965315629341,0.171567810298526,0.658501712451753,1.1240175325762,0.100528972411631,0,0,0,0,0.115930404975077,0.117408694235822,0.721832238805369,1.38895653772983,0.761016608938393,1.58040879591855,0,3.44703808522356,2.34004265139238,2.22946743433092,0.93733833986777,0,0.141775097242386,0,0.290633938513962,0,1.97065295158377,1.05658120815871,1.86595303986695,2.01767934783746,2.77733353538036,0.063497894292169,1.14596527667483,1.17217447210047,0,0.102827492703324,0,0.285826432630578,0,0,0,0.129271715757778,0,0.845302752556,0.797814349754612,0,0.257207374262142,0,0.266422179016099,0.142977993658148,0.542621605391443,0,0,0,0,0,0.871533458600294,0.699810938274399,1.2162378064119,3.51579964002488,2.10833939483032,0.718874566474748,0,0,0.289562613335158,0.410952645100767,0.179060963239896,0.336255431980582,0.788123040807709,0.215627574859517,0.256686072559497,0.254094624222463,0,0,0,0,7.49007023947182,2.99161459204025,9.11714129559278,0.12269149171914,0,0,0,0.356857977594324,0.630809660135739,0.234282829985426,0.601892199455438,0,1.03473071292505,0,0.184369168541703,0.173767228936166,0.195801157462741,0,2.68798433959754,2.37285620900479,2.881644060693,0.303127571446259,1.66435439510497,0,0.496215615637554,0.153461973288062,0.280660094433074,0.768834895534206,0.511707249066704,2.2519548960105,0,0.462629081407967,1.42049380250502,0.739144404124282,0.519254429183621,0.348631135379878,2.41718899183244,6.81721999031168,3.13075362382048,0.34444334449382,0.364182336013434,0.262248829918848,0,0,0,0,0,0,1.19065593693561,0,4.62681758070868,0.270946437543853,0,0,0,0,0.438519753291869,0.261435451024901,0.256450125116389,0,0,1.64865618636356,0,0.165018999841176,0,0,1.6068392984416,0.2900121548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| |||
|short_description=p8@SERP1 | |||
}} |
Revision as of 22:07, 12 September 2013
Short description: | p8@SERP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_SERP1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 105bp_to_ENST00000491660_5end |
EntrezGene: | SERP1 |
HGNC: | 10759 |
UniProt: | C9JUH5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.55e-60 | 98 |
blood island | 1.55e-60 | 98 |
bone marrow | 2.85e-60 | 76 |
hemolymphoid system | 1.97e-57 | 108 |
bone element | 8.33e-56 | 82 |
immune system | 1.44e-51 | 93 |
skeletal element | 1.17e-48 | 90 |
skeletal system | 1.16e-42 | 100 |
lateral plate mesoderm | 1.48e-34 | 203 |
musculoskeletal system | 6.15e-26 | 167 |
mesoderm | 9.63e-22 | 315 |
mesoderm-derived structure | 9.63e-22 | 315 |
presumptive mesoderm | 9.63e-22 | 315 |
connective tissue | 7.72e-12 | 371 |
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