FFCP PHASE1:Hg19::chr3:111298518..111298525,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C21|description=CAGE_peak_at_chr3:111298518..111298525,-|id=chr3:111298518..111298525,-|ontology_enrichment_celltype=CL:0000080!6.09e-12!6;CL:0002586!9.56e-11!3;CL:0000946!9.46e-09!1;CL:0000786!9.46e-09!1;CL:0000980!9.46e-09!1;CL:0000149!2.85e-08!4|ontology_enrichment_celltype_v019=CL:0000946;3.57e-19;1!CL:0000786;3.57e-19;1!CL:0002586;2.40e-07;3|ontology_enrichment_celltype_v019_2=CL:0000946,3.25e-19,1;CL:0000786,3.25e-19,1;CL:0000980,3.25e-19,1;CL:0000785,2.72e-10,2;CL:0000955,2.72e-10,2;CL:0000818,2.72e-10,2;CL:0000954,2.72e-10,2;CL:0000816,2.72e-10,2;CL:0002586,2.32e-07,3;CL:0000817,2.79e-07,3|ontology_enrichment_development_v019=CL:0000954;2.85e-10;2!UBERON:0003056;2.05e-07;3|ontology_enrichment_disease=DOID:0060060!1.02e-08!1;DOID:0060061!1.02e-08!1;DOID:8691!1.02e-08!1;DOID:6193!2.84e-08!1|ontology_enrichment_disease_v019=DOID:0060060;3.57e-19;1!DOID:0060061;3.57e-19;1!DOID:8691;3.57e-19;1|ontology_enrichment_disease_v019_2=DOID:0060060,3.91e-19,1;DOID:0060061,3.91e-19,1;DOID:8691,3.91e-19,1|ontology_enrichment_uberon=UBERON:0000966!6.36e-14!5;UBERON:0005388!6.36e-14!5;UBERON:0001802!6.36e-14!5;UBERON:0001781!9.56e-11!3;UBERON:0001782!9.56e-11!3;UBERON:0005424!9.56e-11!3;UBERON:0002372!4.07e-08!1;UBERON:0001961!4.07e-08!1;UBERON:0001744!4.07e-08!1;UBERON:0001735!4.07e-08!1;UBERON:0002331!2.42e-07!10;UBERON:0000358!2.42e-07!10;UBERON:0000307!2.42e-07!10;UBERON:0000091!2.42e-07!10;UBERON:0000087!2.42e-07!10;UBERON:0007806!2.42e-07!10;UBERON:0008780!2.42e-07!10;UBERON:0005728!2.42e-07!10|ontology_enrichment_uberon_v019=UBERON:0002331;3.79e-17;10!UBERON:0000966;1.56e-15;5!UBERON:0005388;1.56e-15;5!UBERON:0001802;1.56e-15;5!UBERON:0000178;1.18e-11;15!UBERON:0000179;1.18e-11;15!UBERON:0000463;1.18e-11;15!UBERON:0000970;8.30e-09;20!UBERON:0002104;2.05e-08;21!UBERON:0000020;9.89e-08;23!UBERON:0000478;1.69e-07;24!UBERON:0001032;1.97e-07;24!UBERON:0004456;1.97e-07;24!UBERON:0001781;2.40e-07;3!UBERON:0001782;2.40e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0002331,3.79e-17,10;UBERON:0000358,3.79e-17,10;UBERON:0000307,3.79e-17,10;UBERON:0000091,3.79e-17,10;UBERON:0000087,3.79e-17,10;UBERON:0007010,3.79e-17,10;UBERON:0007806,3.79e-17,10;UBERON:0008780,3.79e-17,10;UBERON:0005728,3.79e-17,10;UBERON:0000966,4.01e-13,6;UBERON:0005388,4.01e-13,6;UBERON:0001802,4.01e-13,6;UBERON:0000178,1.18e-11,15;UBERON:0000179,1.18e-11,15;UBERON:0000463,1.18e-11,15;UBERON:0000970,2.05e-08,21;UBERON:0002104,2.05e-08,21;UBERON:0000478,1.69e-07,24;UBERON:0000020,1.97e-07,24;UBERON:0001032,1.97e-07,24;UBERON:0004456,1.97e-07,24;UBERON:0001782,2.32e-07,3;UBERON:0005424,2.32e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80863626235752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,5.64190275256056,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.6051832061148,43.988762264955,52.6286625507495,0,0,0,0,0.19566461893209,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,5.19755703795225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05154941711726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.19986135440423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.41991373867136,0,0,0,0,0,0,0,0,0,3.67076905071656,0,26.0174620803029,0,0,0,0,0,0,0,0,0,0,0,0,0.62041277132864,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr3:111298518..111298525,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_at_chr3:111298518..111298525,- | |||
|id=chr3:111298518..111298525,- | |||
|ontology_enrichment_celltype=CL:0000080!6.09e-12!6;CL:0002586!9.56e-11!3;CL:0000946!9.46e-09!1;CL:0000786!9.46e-09!1;CL:0000980!9.46e-09!1;CL:0000149!2.85e-08!4 | |||
|ontology_enrichment_celltype_v019=CL:0000946;3.57e-19;1!CL:0000786;3.57e-19;1!CL:0002586;2.40e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000946,3.25e-19,1;CL:0000786,3.25e-19,1;CL:0000980,3.25e-19,1;CL:0000785,2.72e-10,2;CL:0000955,2.72e-10,2;CL:0000818,2.72e-10,2;CL:0000954,2.72e-10,2;CL:0000816,2.72e-10,2;CL:0002586,2.32e-07,3;CL:0000817,2.79e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000954;2.85e-10;2!UBERON:0003056;2.05e-07;3 | |||
|ontology_enrichment_disease=DOID:0060060!1.02e-08!1;DOID:0060061!1.02e-08!1;DOID:8691!1.02e-08!1;DOID:6193!2.84e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:0060060;3.57e-19;1!DOID:0060061;3.57e-19;1!DOID:8691;3.57e-19;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,3.91e-19,1;DOID:0060061,3.91e-19,1;DOID:8691,3.91e-19,1 | |||
|ontology_enrichment_uberon=UBERON:0000966!6.36e-14!5;UBERON:0005388!6.36e-14!5;UBERON:0001802!6.36e-14!5;UBERON:0001781!9.56e-11!3;UBERON:0001782!9.56e-11!3;UBERON:0005424!9.56e-11!3;UBERON:0002372!4.07e-08!1;UBERON:0001961!4.07e-08!1;UBERON:0001744!4.07e-08!1;UBERON:0001735!4.07e-08!1;UBERON:0002331!2.42e-07!10;UBERON:0000358!2.42e-07!10;UBERON:0000307!2.42e-07!10;UBERON:0000091!2.42e-07!10;UBERON:0000087!2.42e-07!10;UBERON:0007806!2.42e-07!10;UBERON:0008780!2.42e-07!10;UBERON:0005728!2.42e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;3.79e-17;10!UBERON:0000966;1.56e-15;5!UBERON:0005388;1.56e-15;5!UBERON:0001802;1.56e-15;5!UBERON:0000178;1.18e-11;15!UBERON:0000179;1.18e-11;15!UBERON:0000463;1.18e-11;15!UBERON:0000970;8.30e-09;20!UBERON:0002104;2.05e-08;21!UBERON:0000020;9.89e-08;23!UBERON:0000478;1.69e-07;24!UBERON:0001032;1.97e-07;24!UBERON:0004456;1.97e-07;24!UBERON:0001781;2.40e-07;3!UBERON:0001782;2.40e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,3.79e-17,10;UBERON:0000358,3.79e-17,10;UBERON:0000307,3.79e-17,10;UBERON:0000091,3.79e-17,10;UBERON:0000087,3.79e-17,10;UBERON:0007010,3.79e-17,10;UBERON:0007806,3.79e-17,10;UBERON:0008780,3.79e-17,10;UBERON:0005728,3.79e-17,10;UBERON:0000966,4.01e-13,6;UBERON:0005388,4.01e-13,6;UBERON:0001802,4.01e-13,6;UBERON:0000178,1.18e-11,15;UBERON:0000179,1.18e-11,15;UBERON:0000463,1.18e-11,15;UBERON:0000970,2.05e-08,21;UBERON:0002104,2.05e-08,21;UBERON:0000478,1.69e-07,24;UBERON:0000020,1.97e-07,24;UBERON:0001032,1.97e-07,24;UBERON:0004456,1.97e-07,24;UBERON:0001782,2.32e-07,3;UBERON:0005424,2.32e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80863626235752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,5.64190275256056,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.6051832061148,43.988762264955,52.6286625507495,0,0,0,0,0.19566461893209,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,5.19755703795225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05154941711726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.19986135440423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.41991373867136,0,0,0,0,0,0,0,0,0,3.67076905071656,0,26.0174620803029,0,0,0,0,0,0,0,0,0,0,0,0,0.62041277132864,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:111298518..111298525,- | |||
}} |
Revision as of 20:43, 12 September 2013
Short description: | p@chr3:111298518..111298525, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:111298518..111298525, - |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 3.25e-19 | 1 |
plasma cell | 3.25e-19 | 1 |
plasmablast | 3.25e-19 | 1 |
mature B cell | 2.72e-10 | 2 |
pre-B-II cell | 2.72e-10 | 2 |
transitional stage B cell | 2.72e-10 | 2 |
small pre-B-II cell | 2.72e-10 | 2 |
immature B cell | 2.72e-10 | 2 |
retinal pigment epithelial cell | 2.32e-07 | 3 |
precursor B cell | 2.79e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 3.79e-17 | 10 |
blastocyst | 3.79e-17 | 10 |
blastula | 3.79e-17 | 10 |
bilaminar disc | 3.79e-17 | 10 |
inner cell mass | 3.79e-17 | 10 |
cleaving embryo | 3.79e-17 | 10 |
connecting stalk | 3.79e-17 | 10 |
inner cell mass derived epiblast | 3.79e-17 | 10 |
extraembryonic mesoderm | 3.79e-17 | 10 |
retina | 4.01e-13 | 6 |
photoreceptor array | 4.01e-13 | 6 |
posterior segment of eyeball | 4.01e-13 | 6 |
blood | 1.18e-11 | 15 |
haemolymphatic fluid | 1.18e-11 | 15 |
organism substance | 1.18e-11 | 15 |
eye | 2.05e-08 | 21 |
visual system | 2.05e-08 | 21 |
extraembryonic structure | 1.69e-07 | 24 |
sense organ | 1.97e-07 | 24 |
sensory system | 1.97e-07 | 24 |
entire sense organ system | 1.97e-07 | 24 |
pigmented layer of retina | 2.32e-07 | 3 |
presumptive retinal pigmented epithelium | 2.32e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 3.91e-19 | 1 |
cutaneous T cell lymphoma | 3.91e-19 | 1 |
mycosis fungoides | 3.91e-19 | 1 |
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