FFCP PHASE1:Hg19::chr3:54962072..54962092,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=57408|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=25023|TSSclassifier=S|UniProt=Q9HBL6|association_with_transcript=0bp_to_NM_020678,uc003dhl.2_5end|coexpression_cluster_id=C24|description=CAGE_peak_1_at_LRTM1_5end|id=chr3:54962072..54962092,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0003056;2.49e-17;3!UBERON:0000358;9.73e-14;1!UBERON:0008814;1.64e-07;2!UBERON:0010056;1.64e-07;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001905!2.80e-15!2;UBERON:0002757!2.80e-15!2;UBERON:0010134!2.80e-15!2;UBERON:0002784!2.80e-15!2;UBERON:0005408!2.80e-15!2;UBERON:0001899!2.80e-15!2;UBERON:0000341!8.49e-15!2;UBERON:0001042!7.38e-11!10;UBERON:0009145!7.38e-11!10;UBERON:0001723!3.19e-10!3;UBERON:0001033!3.19e-10!3;UBERON:0010056!3.19e-10!3;UBERON:0007023!4.34e-10!115;UBERON:0006562!6.96e-10!11;UBERON:0002240!1.17e-09!3;UBERON:0002426!2.71e-08!1;UBERON:0003831!2.71e-08!1;UBERON:0003898!2.71e-08!1;UBERON:0004830!2.71e-08!1;UBERON:0001774!2.71e-08!1;UBERON:0003830!2.71e-08!1;UBERON:0005175!2.71e-08!1;UBERON:0003897!2.71e-08!1;UBERON:0001103!2.71e-08!1;UBERON:0010084!2.71e-08!1;UBERON:0003296!4.56e-08!4;UBERON:0010133!4.56e-08!4;UBERON:0007029!5.05e-08!1;UBERON:0000989!6.19e-08!1;UBERON:0008811!6.19e-08!1;UBERON:0006258!6.19e-08!1;UBERON:0005876!6.19e-08!1;UBERON:0004874!6.19e-08!1;UBERON:0001301!8.12e-08!1;UBERON:0002372!8.69e-08!1;UBERON:0001961!8.69e-08!1;UBERON:0001744!8.69e-08!1;UBERON:0001735!8.69e-08!1;UBERON:0002336!9.94e-08!1;UBERON:0001018!9.94e-08!1;UBERON:0002473!9.94e-08!1;UBERON:0005340!9.94e-08!1;UBERON:0002316!9.94e-08!1;UBERON:0003544!9.94e-08!1;UBERON:0001020!9.94e-08!1;UBERON:0005970!9.94e-08!1;UBERON:0002437!9.94e-08!1;UBERON:0002581!1.06e-07!1;UBERON:0008814!2.41e-07!15;UBERON:0000020!2.55e-07!23;UBERON:0001032!5.29e-07!24;UBERON:0004456!5.29e-07!24|ontology_enrichment_uberon_v019=UBERON:0001905;1.29e-26;2!UBERON:0002757;1.29e-26;2!UBERON:0010134;1.29e-26;2!UBERON:0005408;1.29e-26;2!UBERON:0001899;1.29e-26;2!UBERON:0000341;8.70e-26;2!UBERON:0001723;1.39e-17;3!UBERON:0001033;1.39e-17;3!UBERON:0002426;7.55e-14;1!UBERON:0003831;7.55e-14;1!UBERON:0003898;7.55e-14;1!UBERON:0004830;7.55e-14;1!UBERON:0003830;7.55e-14;1!UBERON:0005175;7.55e-14;1!UBERON:0001774;7.55e-14;1!UBERON:0001103;7.55e-14;1!UBERON:0003296;8.06e-14;4!UBERON:0010133;8.06e-14;4!UBERON:0002784;8.06e-14;4!UBERON:0000020;1.86e-13;23!UBERON:0001032;6.77e-13;24!UBERON:0004456;6.77e-13;24!UBERON:0000966;8.71e-11;5!UBERON:0005388;8.71e-11;5!UBERON:0001802;8.71e-11;5!UBERON:0000974;3.02e-09;6!UBERON:0001894;2.78e-08;7!UBERON:0002360;1.20e-07;2!UBERON:0000094;1.20e-07;2!UBERON:0010743;1.20e-07;2!UBERON:0005090;1.45e-07;2!UBERON:0001630;1.45e-07;2!UBERON:0003127;2.12e-07;2!UBERON:0002148;2.12e-07;2!UBERON:0006331;2.12e-07;2!UBERON:0009662;2.12e-07;2!UBERON:0000922;2.69e-07;49|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.29e-26,2;UBERON:0002757,1.29e-26,2;UBERON:0010134,1.29e-26,2;UBERON:0005408,1.29e-26,2;UBERON:0001899,1.29e-26,2;UBERON:0000341,9.87e-26,2;UBERON:0001723,1.28e-17,3;UBERON:0001033,1.28e-17,3;UBERON:0010056,1.28e-17,3;UBERON:0002426,7.55e-14,1;UBERON:0003831,7.55e-14,1;UBERON:0003898,7.55e-14,1;UBERON:0004830,7.55e-14,1;UBERON:0003830,7.55e-14,1;UBERON:0005175,7.55e-14,1;UBERON:0001774,7.55e-14,1;UBERON:0001103,7.55e-14,1;UBERON:0010084,7.55e-14,1;UBERON:0003296,8.06e-14,4;UBERON:0010133,8.06e-14,4;UBERON:0002784,8.06e-14,4;UBERON:0000020,6.44e-13,24;UBERON:0001032,6.44e-13,24;UBERON:0004456,6.44e-13,24;UBERON:0000966,3.71e-09,6;UBERON:0005388,3.71e-09,6;UBERON:0001802,3.71e-09,6;UBERON:0001894,2.78e-08,7;UBERON:0006222,2.78e-08,7;UBERON:0002360,1.20e-07,2;UBERON:0000094,1.20e-07,2;UBERON:0010743,1.20e-07,2;UBERON:0005090,1.45e-07,2;UBERON:0001630,1.45e-07,2;UBERON:0003127,1.87e-07,2;UBERON:0002148,2.12e-07,2;UBERON:0006331,2.12e-07,2;UBERON:0009662,2.12e-07,2;UBERON:0000153,7.26e-07,62;UBERON:0007811,7.26e-07,62;UBERON:0008814,9.58e-07,18|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686286847621712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.085226627416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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=57408 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25023 | |||
|TSSclassifier=S | |||
|UniProt=Q9HBL6 | |||
|association_with_transcript=0bp_to_NM_020678,uc003dhl.2_5end | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_1_at_LRTM1_5end | |||
|id=chr3:54962072..54962092,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;2.49e-17;3!UBERON:0000358;9.73e-14;1!UBERON:0008814;1.64e-07;2!UBERON:0010056;1.64e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001905!2.80e-15!2;UBERON:0002757!2.80e-15!2;UBERON:0010134!2.80e-15!2;UBERON:0002784!2.80e-15!2;UBERON:0005408!2.80e-15!2;UBERON:0001899!2.80e-15!2;UBERON:0000341!8.49e-15!2;UBERON:0001042!7.38e-11!10;UBERON:0009145!7.38e-11!10;UBERON:0001723!3.19e-10!3;UBERON:0001033!3.19e-10!3;UBERON:0010056!3.19e-10!3;UBERON:0007023!4.34e-10!115;UBERON:0006562!6.96e-10!11;UBERON:0002240!1.17e-09!3;UBERON:0002426!2.71e-08!1;UBERON:0003831!2.71e-08!1;UBERON:0003898!2.71e-08!1;UBERON:0004830!2.71e-08!1;UBERON:0001774!2.71e-08!1;UBERON:0003830!2.71e-08!1;UBERON:0005175!2.71e-08!1;UBERON:0003897!2.71e-08!1;UBERON:0001103!2.71e-08!1;UBERON:0010084!2.71e-08!1;UBERON:0003296!4.56e-08!4;UBERON:0010133!4.56e-08!4;UBERON:0007029!5.05e-08!1;UBERON:0000989!6.19e-08!1;UBERON:0008811!6.19e-08!1;UBERON:0006258!6.19e-08!1;UBERON:0005876!6.19e-08!1;UBERON:0004874!6.19e-08!1;UBERON:0001301!8.12e-08!1;UBERON:0002372!8.69e-08!1;UBERON:0001961!8.69e-08!1;UBERON:0001744!8.69e-08!1;UBERON:0001735!8.69e-08!1;UBERON:0002336!9.94e-08!1;UBERON:0001018!9.94e-08!1;UBERON:0002473!9.94e-08!1;UBERON:0005340!9.94e-08!1;UBERON:0002316!9.94e-08!1;UBERON:0003544!9.94e-08!1;UBERON:0001020!9.94e-08!1;UBERON:0005970!9.94e-08!1;UBERON:0002437!9.94e-08!1;UBERON:0002581!1.06e-07!1;UBERON:0008814!2.41e-07!15;UBERON:0000020!2.55e-07!23;UBERON:0001032!5.29e-07!24;UBERON:0004456!5.29e-07!24 | |||
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|short_description=p1@LRTM1 | |||
}} |
Revision as of 00:55, 13 September 2013
Short description: | p1@LRTM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_LRTM1_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 0bp_to_NM_020678, uc003dhl.2_5end |
EntrezGene: | LRTM1 |
HGNC: | 25023 |
UniProt: | Q9HBL6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.