FFCP PHASE1:Hg19::chr3:52486907..52486937,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7134|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11943|TSSclassifier=S|UniProt=C9JDI3|association_with_transcript=-57bp_to_ENST00000496590_5end|coexpression_cluster_id=C56|description=CAGE_peak_7_at_TNNC1_5end|id=chr3:52486907..52486937,-|ontology_enrichment_celltype=CL:0000632!5.02e-08!2|ontology_enrichment_celltype_v019=CL:0000632;1.14e-10;3|ontology_enrichment_celltype_v019_2=CL:0000632,1.09e-10,3|ontology_enrichment_development_v019=UBERON:0004140;8.64e-30;1!UBERON:0010226;3.64e-29;1!UBERON:0005062;1.76e-08;4!UBERON:0007284;1.76e-08;4|ontology_enrichment_disease=DOID:114!6.20e-28!2;DOID:178!6.22e-15!1;DOID:326!6.22e-15!1;DOID:3978!6.22e-15!1;DOID:3394!6.22e-15!1;DOID:5844!6.22e-15!1;DOID:1287!1.72e-14!4|ontology_enrichment_disease_v019=DOID:114;4.14e-57;2!DOID:178;1.33e-29;1!DOID:326;1.33e-29;1!DOID:3978;1.33e-29;1!DOID:3394;1.33e-29;1!DOID:5844;1.33e-29;1!DOID:1287;3.40e-29;4|ontology_enrichment_disease_v019_2=DOID:114,4.77e-57,2;DOID:178,1.33e-29,1;DOID:326,1.33e-29,1;DOID:3978,1.33e-29,1;DOID:3394,1.33e-29,1;DOID:5844,1.33e-29,1;DOID:1287,3.65e-29,4|ontology_enrichment_uberon=UBERON:0007100!6.76e-24!27;UBERON:0003978!6.63e-19!3;UBERON:0009751!6.63e-19!3;UBERON:0000946!6.63e-19!3;UBERON:0002523!6.63e-19!3;UBERON:0005983!6.63e-19!3;UBERON:0002165!6.63e-19!3;UBERON:0002062!6.63e-19!3;UBERON:0007280!6.63e-19!3;UBERON:0003103!2.89e-18!69;UBERON:0002146!5.42e-15!1;UBERON:0005623!5.42e-15!1;UBERON:0002084!1.07e-14!1;UBERON:0002082!1.07e-14!1;UBERON:0004706!1.07e-14!1;UBERON:0002135!1.23e-14!1;UBERON:0000948!2.92e-09!24;UBERON:0005498!2.92e-09!24;UBERON:0004140!2.92e-09!24;UBERON:0009881!2.92e-09!24;UBERON:0004141!2.92e-09!24;UBERON:0003084!2.92e-09!24;UBERON:0007005!2.92e-09!24;UBERON:0004139!2.92e-09!24;UBERON:0004291!2.92e-09!24;UBERON:0002133!5.74e-08!2;UBERON:0003127!6.58e-08!2|ontology_enrichment_uberon_v019=UBERON:0007100;8.53e-41;25!UBERON:0002146;8.64e-30;1!UBERON:0005623;8.64e-30;1!UBERON:0002084;3.64e-29;1!UBERON:0002082;3.64e-29;1!UBERON:0000948;2.40e-12;22!UBERON:0003978;7.07e-11;3!UBERON:0000946;7.07e-11;3!UBERON:0004151;1.14e-10;3!UBERON:0003103;1.01e-08;61|ontology_enrichment_uberon_v019_2=UBERON:0007100,8.48e-38,27;UBERON:0002146,9.99e-30,1;UBERON:0005623,9.99e-30,1;UBERON:0002084,4.20e-29,1;UBERON:0002082,4.20e-29,1;UBERON:0010226,4.20e-29,1;UBERON:0003103,3.04e-15,68;UBERON:0000948,2.27e-11,24;UBERON:0005498,2.27e-11,24;UBERON:0004140,2.27e-11,24;UBERON:0009881,2.27e-11,24;UBERON:0004141,2.27e-11,24;UBERON:0003084,2.27e-11,24;UBERON:0007005,2.27e-11,24;UBERON:0004139,2.27e-11,24;UBERON:0004291,2.27e-11,24;UBERON:0003978,7.42e-11,3;UBERON:0009751,7.42e-11,3;UBERON:0000946,7.42e-11,3;UBERON:0002523,7.42e-11,3;UBERON:0005983,7.42e-11,3;UBERON:0002165,7.42e-11,3;UBERON:0002062,7.42e-11,3;UBERON:0007280,7.42e-11,3;UBERON:0004151,1.20e-10,3;UBERON:0001009,2.41e-09,112|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,5.27068975226872,0,3.19486400798386,2.14613024068285,2.23171457441873,5.44186127142483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32418394073086,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0.342233301085281,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0|short_description=p7@TNNC1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=7134 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11943 | |||
|TSSclassifier=S | |||
|UniProt=C9JDI3 | |||
|association_with_transcript=-57bp_to_ENST00000496590_5end | |||
|coexpression_cluster_id=C56 | |||
|description=CAGE_peak_7_at_TNNC1_5end | |||
|id=chr3:52486907..52486937,- | |||
|ontology_enrichment_celltype=CL:0000632!5.02e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0000632;1.14e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000632,1.09e-10,3 | |||
|ontology_enrichment_development_v019=UBERON:0004140;8.64e-30;1!UBERON:0010226;3.64e-29;1!UBERON:0005062;1.76e-08;4!UBERON:0007284;1.76e-08;4 | |||
|ontology_enrichment_disease=DOID:114!6.20e-28!2;DOID:178!6.22e-15!1;DOID:326!6.22e-15!1;DOID:3978!6.22e-15!1;DOID:3394!6.22e-15!1;DOID:5844!6.22e-15!1;DOID:1287!1.72e-14!4 | |||
|ontology_enrichment_disease_v019=DOID:114;4.14e-57;2!DOID:178;1.33e-29;1!DOID:326;1.33e-29;1!DOID:3978;1.33e-29;1!DOID:3394;1.33e-29;1!DOID:5844;1.33e-29;1!DOID:1287;3.40e-29;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,4.77e-57,2;DOID:178,1.33e-29,1;DOID:326,1.33e-29,1;DOID:3978,1.33e-29,1;DOID:3394,1.33e-29,1;DOID:5844,1.33e-29,1;DOID:1287,3.65e-29,4 | |||
|ontology_enrichment_uberon=UBERON:0007100!6.76e-24!27;UBERON:0003978!6.63e-19!3;UBERON:0009751!6.63e-19!3;UBERON:0000946!6.63e-19!3;UBERON:0002523!6.63e-19!3;UBERON:0005983!6.63e-19!3;UBERON:0002165!6.63e-19!3;UBERON:0002062!6.63e-19!3;UBERON:0007280!6.63e-19!3;UBERON:0003103!2.89e-18!69;UBERON:0002146!5.42e-15!1;UBERON:0005623!5.42e-15!1;UBERON:0002084!1.07e-14!1;UBERON:0002082!1.07e-14!1;UBERON:0004706!1.07e-14!1;UBERON:0002135!1.23e-14!1;UBERON:0000948!2.92e-09!24;UBERON:0005498!2.92e-09!24;UBERON:0004140!2.92e-09!24;UBERON:0009881!2.92e-09!24;UBERON:0004141!2.92e-09!24;UBERON:0003084!2.92e-09!24;UBERON:0007005!2.92e-09!24;UBERON:0004139!2.92e-09!24;UBERON:0004291!2.92e-09!24;UBERON:0002133!5.74e-08!2;UBERON:0003127!6.58e-08!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;8.53e-41;25!UBERON:0002146;8.64e-30;1!UBERON:0005623;8.64e-30;1!UBERON:0002084;3.64e-29;1!UBERON:0002082;3.64e-29;1!UBERON:0000948;2.40e-12;22!UBERON:0003978;7.07e-11;3!UBERON:0000946;7.07e-11;3!UBERON:0004151;1.14e-10;3!UBERON:0003103;1.01e-08;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,8.48e-38,27;UBERON:0002146,9.99e-30,1;UBERON:0005623,9.99e-30,1;UBERON:0002084,4.20e-29,1;UBERON:0002082,4.20e-29,1;UBERON:0010226,4.20e-29,1;UBERON:0003103,3.04e-15,68;UBERON:0000948,2.27e-11,24;UBERON:0005498,2.27e-11,24;UBERON:0004140,2.27e-11,24;UBERON:0009881,2.27e-11,24;UBERON:0004141,2.27e-11,24;UBERON:0003084,2.27e-11,24;UBERON:0007005,2.27e-11,24;UBERON:0004139,2.27e-11,24;UBERON:0004291,2.27e-11,24;UBERON:0003978,7.42e-11,3;UBERON:0009751,7.42e-11,3;UBERON:0000946,7.42e-11,3;UBERON:0002523,7.42e-11,3;UBERON:0005983,7.42e-11,3;UBERON:0002165,7.42e-11,3;UBERON:0002062,7.42e-11,3;UBERON:0007280,7.42e-11,3;UBERON:0004151,1.20e-10,3;UBERON:0001009,2.41e-09,112 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,5.27068975226872,0,3.19486400798386,2.14613024068285,2.23171457441873,5.44186127142483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32418394073086,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0.342233301085281,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p7@TNNC1 | |||
}} |
Revision as of 00:49, 13 September 2013
Short description: | p7@TNNC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_TNNC1_5end |
Coexpression cluster: | C56_heart_left_umbilical_skeletal_penis_diaphragm_tongue |
Association with transcript: | -57bp_to_ENST00000496590_5end |
EntrezGene: | TNNC1 |
HGNC: | 11943 |
UniProt: | C9JDI3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stellate cell | 1.09e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 8.48e-38 | 27 |
pulmonary valve | 9.99e-30 | 1 |
semi-lunar valve | 9.99e-30 | 1 |
heart left ventricle | 4.20e-29 | 1 |
cardiac ventricle | 4.20e-29 | 1 |
future cardiac ventricle | 4.20e-29 | 1 |
compound organ | 3.04e-15 | 68 |
heart | 2.27e-11 | 24 |
primitive heart tube | 2.27e-11 | 24 |
primary heart field | 2.27e-11 | 24 |
anterior lateral plate mesoderm | 2.27e-11 | 24 |
heart tube | 2.27e-11 | 24 |
heart primordium | 2.27e-11 | 24 |
cardiac mesoderm | 2.27e-11 | 24 |
cardiogenic plate | 2.27e-11 | 24 |
heart rudiment | 2.27e-11 | 24 |
valve | 7.42e-11 | 3 |
cardiac mesenchyme | 7.42e-11 | 3 |
cardial valve | 7.42e-11 | 3 |
tunica intima | 7.42e-11 | 3 |
heart layer | 7.42e-11 | 3 |
endocardium | 7.42e-11 | 3 |
endocardial cushion | 7.42e-11 | 3 |
presumptive endocardium | 7.42e-11 | 3 |
cardiac chamber | 1.20e-10 | 3 |
circulatory system | 2.41e-09 | 112 |
Ontology term | p-value | n |
---|---|---|
heart disease | 4.77e-57 | 2 |
vascular disease | 1.33e-29 | 1 |
ischemia | 1.33e-29 | 1 |
extrinsic cardiomyopathy | 1.33e-29 | 1 |
myocardial ischemia | 1.33e-29 | 1 |
myocardial infarction | 1.33e-29 | 1 |
cardiovascular system disease | 3.65e-29 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.