FFCP PHASE1:Hg19::chr3:24206971..24206999,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7068|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11799|TSSclassifier=S|UniProt=|association_with_transcript=-21bp_to_uc003cda.1_5end|coexpression_cluster_id=C89|description=CAGE_peak_8_at_THRB_5end|id=chr3:24206971..24206999,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0003056;1.40e-14;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:5409;2.53e-11;4!DOID:1325;5.08e-07;7!DOID:3904;5.08e-07;7|ontology_enrichment_disease_v019_2=DOID:5409,2.53e-11,4;DOID:1325,5.08e-07,7;DOID:3904,5.08e-07,7|ontology_enrichment_uberon=UBERON:0002780!2.31e-28!41;UBERON:0001890!2.31e-28!41;UBERON:0006240!2.31e-28!41;UBERON:0002020!4.50e-28!34;UBERON:0003528!4.50e-28!34;UBERON:0002619!9.48e-28!22;UBERON:0003080!1.14e-27!42;UBERON:0003056!1.53e-26!61;UBERON:0000956!1.86e-24!25;UBERON:0000203!1.86e-24!25;UBERON:0001869!3.63e-24!32;UBERON:0001049!4.85e-24!57;UBERON:0005068!4.85e-24!57;UBERON:0006241!4.85e-24!57;UBERON:0007135!4.85e-24!57;UBERON:0002791!2.00e-23!33;UBERON:0001950!2.16e-23!20;UBERON:0002616!3.49e-23!59;UBERON:0000955!6.65e-23!69;UBERON:0006238!6.65e-23!69;UBERON:0001893!1.00e-22!34;UBERON:0000007!1.34e-22!2;UBERON:0001876!2.85e-22!2;UBERON:0003075!1.85e-21!86;UBERON:0007284!1.85e-21!86;UBERON:0005743!3.42e-21!86;UBERON:0002346!1.99e-20!90;UBERON:0000349!1.31e-19!5;UBERON:0001017!4.51e-19!82;UBERON:0000073!4.86e-19!94;UBERON:0001016!4.86e-19!94;UBERON:0000033!2.58e-14!123;UBERON:0000153!1.45e-13!129;UBERON:0007811!1.45e-13!129;UBERON:0007023!2.21e-13!115;UBERON:0001871!1.96e-12!7;UBERON:0001874!8.64e-12!1;UBERON:0003296!8.65e-12!4;UBERON:0010133!8.65e-12!4;UBERON:0002902!1.47e-11!1;UBERON:0009899!1.47e-11!1;UBERON:0002022!1.81e-11!1;UBERON:0002420!3.56e-11!9;UBERON:0007245!3.56e-11!9;UBERON:0010009!3.56e-11!9;UBERON:0010011!3.56e-11!9;UBERON:0000454!3.56e-11!9;UBERON:0004121!7.94e-10!169;UBERON:0000924!1.48e-09!173;UBERON:0006601!1.48e-09!173;UBERON:0000966!1.55e-09!5;UBERON:0005388!1.55e-09!5;UBERON:0001802!1.55e-09!5;UBERON:0000025!4.20e-07!194;UBERON:0001894!4.20e-07!7;UBERON:0006222!4.20e-07!7|ontology_enrichment_uberon_v019=UBERON:0000007;7.79e-79;2!UBERON:0003296;4.05e-40;4!UBERON:0010133;4.05e-40;4!UBERON:0001894;1.80e-23;7!UBERON:0000966;2.74e-09;5!UBERON:0005388;2.74e-09;5!UBERON:0001802;2.74e-09;5!UBERON:0000970;5.93e-09;20!UBERON:0002104;1.42e-08;21!UBERON:0000020;6.52e-08;23!UBERON:0001032;1.27e-07;24!UBERON:0004456;1.27e-07;24|ontology_enrichment_uberon_v019_2=UBERON:0000007,5.22e-79,2;UBERON:0003296,3.31e-40,4;UBERON:0010133,3.31e-40,4;UBERON:0001894,1.61e-23,7;UBERON:0006222,1.61e-23,7;UBERON:0000970,1.48e-08,21;UBERON:0002104,1.48e-08,21;UBERON:0000966,5.92e-08,6;UBERON:0005388,5.92e-08,6;UBERON:0001802,5.92e-08,6;UBERON:0000020,1.31e-07,24;UBERON:0001032,1.31e-07,24;UBERON:0004456,1.31e-07,24|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12990370390266,0,0,0.126621591911757,0,0,0,0,0,0,0.686379991447858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,1.21393120847326,1.36597314810779,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0.214429632529969,4.58239474024907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,55.6299014731871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7068 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11799 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-21bp_to_uc003cda.1_5end | |||
|coexpression_cluster_id=C89 | |||
|description=CAGE_peak_8_at_THRB_5end | |||
|id=chr3:24206971..24206999,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.40e-14;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5409;2.53e-11;4!DOID:1325;5.08e-07;7!DOID:3904;5.08e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,2.53e-11,4;DOID:1325,5.08e-07,7;DOID:3904,5.08e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0002780!2.31e-28!41;UBERON:0001890!2.31e-28!41;UBERON:0006240!2.31e-28!41;UBERON:0002020!4.50e-28!34;UBERON:0003528!4.50e-28!34;UBERON:0002619!9.48e-28!22;UBERON:0003080!1.14e-27!42;UBERON:0003056!1.53e-26!61;UBERON:0000956!1.86e-24!25;UBERON:0000203!1.86e-24!25;UBERON:0001869!3.63e-24!32;UBERON:0001049!4.85e-24!57;UBERON:0005068!4.85e-24!57;UBERON:0006241!4.85e-24!57;UBERON:0007135!4.85e-24!57;UBERON:0002791!2.00e-23!33;UBERON:0001950!2.16e-23!20;UBERON:0002616!3.49e-23!59;UBERON:0000955!6.65e-23!69;UBERON:0006238!6.65e-23!69;UBERON:0001893!1.00e-22!34;UBERON:0000007!1.34e-22!2;UBERON:0001876!2.85e-22!2;UBERON:0003075!1.85e-21!86;UBERON:0007284!1.85e-21!86;UBERON:0005743!3.42e-21!86;UBERON:0002346!1.99e-20!90;UBERON:0000349!1.31e-19!5;UBERON:0001017!4.51e-19!82;UBERON:0000073!4.86e-19!94;UBERON:0001016!4.86e-19!94;UBERON:0000033!2.58e-14!123;UBERON:0000153!1.45e-13!129;UBERON:0007811!1.45e-13!129;UBERON:0007023!2.21e-13!115;UBERON:0001871!1.96e-12!7;UBERON:0001874!8.64e-12!1;UBERON:0003296!8.65e-12!4;UBERON:0010133!8.65e-12!4;UBERON:0002902!1.47e-11!1;UBERON:0009899!1.47e-11!1;UBERON:0002022!1.81e-11!1;UBERON:0002420!3.56e-11!9;UBERON:0007245!3.56e-11!9;UBERON:0010009!3.56e-11!9;UBERON:0010011!3.56e-11!9;UBERON:0000454!3.56e-11!9;UBERON:0004121!7.94e-10!169;UBERON:0000924!1.48e-09!173;UBERON:0006601!1.48e-09!173;UBERON:0000966!1.55e-09!5;UBERON:0005388!1.55e-09!5;UBERON:0001802!1.55e-09!5;UBERON:0000025!4.20e-07!194;UBERON:0001894!4.20e-07!7;UBERON:0006222!4.20e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;7.79e-79;2!UBERON:0003296;4.05e-40;4!UBERON:0010133;4.05e-40;4!UBERON:0001894;1.80e-23;7!UBERON:0000966;2.74e-09;5!UBERON:0005388;2.74e-09;5!UBERON:0001802;2.74e-09;5!UBERON:0000970;5.93e-09;20!UBERON:0002104;1.42e-08;21!UBERON:0000020;6.52e-08;23!UBERON:0001032;1.27e-07;24!UBERON:0004456;1.27e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,5.22e-79,2;UBERON:0003296,3.31e-40,4;UBERON:0010133,3.31e-40,4;UBERON:0001894,1.61e-23,7;UBERON:0006222,1.61e-23,7;UBERON:0000970,1.48e-08,21;UBERON:0002104,1.48e-08,21;UBERON:0000966,5.92e-08,6;UBERON:0005388,5.92e-08,6;UBERON:0001802,5.92e-08,6;UBERON:0000020,1.31e-07,24;UBERON:0001032,1.31e-07,24;UBERON:0004456,1.31e-07,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12990370390266,0,0,0.126621591911757,0,0,0,0,0,0,0.686379991447858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,1.21393120847326,1.36597314810779,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0.214429632529969,4.58239474024907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,55.6299014731871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p8@THRB | |||
}} |
Revision as of 23:43, 12 September 2013
Short description: | p8@THRB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_THRB_5end |
Coexpression cluster: | C89_small_retinoblastoma_medulloblastoma_iPS_acantholytic_eye_bronchogenic |
Association with transcript: | -21bp_to_uc003cda.1_5end |
EntrezGene: | THRB |
HGNC: | 11799 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pituitary gland | 5.22e-79 | 2 |
gland of diencephalon | 3.31e-40 | 4 |
neuroendocrine gland | 3.31e-40 | 4 |
diencephalon | 1.61e-23 | 7 |
future diencephalon | 1.61e-23 | 7 |
eye | 1.48e-08 | 21 |
visual system | 1.48e-08 | 21 |
retina | 5.92e-08 | 6 |
photoreceptor array | 5.92e-08 | 6 |
posterior segment of eyeball | 5.92e-08 | 6 |
sense organ | 1.31e-07 | 24 |
sensory system | 1.31e-07 | 24 |
entire sense organ system | 1.31e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 2.53e-11 | 4 |
bronchus cancer | 5.08e-07 | 7 |
bronchogenic carcinoma | 5.08e-07 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.