FFCP PHASE1:Hg19::chr3:12225025..12225037,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6854|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=11495|TSSclassifier=N|UniProt=|association_with_transcript=152bp_to_BC040661_5end|coexpression_cluster_id=C32|description=CAGE_peak_10_at_SYN2_5end|id=chr3:12225025..12225037,+|ontology_enrichment_celltype=CL:0000242!3.92e-12!2|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0010122;3.34e-11;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!1.92e-80!34;UBERON:0003528!1.92e-80!34;UBERON:0001869!4.58e-78!32;UBERON:0001893!2.45e-73!34;UBERON:0001049!4.32e-70!57;UBERON:0005068!4.32e-70!57;UBERON:0006241!4.32e-70!57;UBERON:0007135!4.32e-70!57;UBERON:0000955!7.34e-70!69;UBERON:0006238!7.34e-70!69;UBERON:0002791!5.81e-69!33;UBERON:0002619!1.23e-67!22;UBERON:0002616!1.43e-67!59;UBERON:0002780!4.57e-66!41;UBERON:0001890!4.57e-66!41;UBERON:0006240!4.57e-66!41;UBERON:0003080!2.04e-64!42;UBERON:0001017!2.12e-62!82;UBERON:0000956!2.06e-59!25;UBERON:0000203!2.06e-59!25;UBERON:0005743!2.70e-59!86;UBERON:0001950!2.31e-57!20;UBERON:0000073!3.05e-53!94;UBERON:0001016!3.05e-53!94;UBERON:0003075!1.55e-48!86;UBERON:0007284!1.55e-48!86;UBERON:0002346!3.75e-46!90;UBERON:0003056!3.53e-43!61;UBERON:0000033!5.54e-40!123;UBERON:0007023!2.89e-38!115;UBERON:0000153!7.08e-38!129;UBERON:0007811!7.08e-38!129;UBERON:0000200!2.85e-33!6;UBERON:0004121!1.35e-31!169;UBERON:0000924!9.73e-31!173;UBERON:0006601!9.73e-31!173;UBERON:0001872!1.48e-27!5;UBERON:0002308!7.28e-22!9;UBERON:0000125!7.28e-22!9;UBERON:0000025!2.44e-18!194;UBERON:0002021!2.56e-18!5;UBERON:0002771!3.08e-18!3;UBERON:0001871!4.92e-18!7;UBERON:0005383!9.68e-18!3;UBERON:0005382!9.68e-18!3;UBERON:0002420!9.43e-16!9;UBERON:0007245!9.43e-16!9;UBERON:0010009!9.43e-16!9;UBERON:0010011!9.43e-16!9;UBERON:0000454!9.43e-16!9;UBERON:0000064!2.84e-14!219;UBERON:0004111!1.24e-13!241;UBERON:0000369!1.93e-13!4;UBERON:0002435!1.93e-13!4;UBERON:0000204!1.93e-13!4;UBERON:0010082!1.93e-13!4;UBERON:0009663!3.81e-13!7;UBERON:0001954!8.36e-13!2;UBERON:0003022!8.36e-13!2;UBERON:0002421!8.36e-13!2;UBERON:0002600!8.36e-13!2;UBERON:0001873!9.39e-13!2;UBERON:0010122!9.39e-13!2;UBERON:0000475!1.91e-12!365;UBERON:0000483!2.09e-12!309;UBERON:0000119!3.15e-12!312;UBERON:0002148!6.14e-12!2;UBERON:0009662!6.14e-12!2;UBERON:0000477!1.19e-11!286;UBERON:0000349!2.90e-11!5;UBERON:0004733!3.13e-11!12;UBERON:0002028!3.13e-11!12;UBERON:0007277!3.13e-11!12;UBERON:0004732!2.37e-10!13;UBERON:0002680!5.32e-10!9;UBERON:0001895!5.32e-10!9;UBERON:0010092!5.32e-10!9;UBERON:0003076!6.10e-09!15;UBERON:0003057!6.10e-09!15;UBERON:0000988!3.02e-08!3;UBERON:0006331!3.02e-08!3;UBERON:0000062!9.19e-08!511;UBERON:0003112!2.66e-07!1;UBERON:0000032!2.66e-07!1;UBERON:0005253!2.66e-07!1;UBERON:0003128!2.66e-07!1;UBERON:0002241!2.66e-07!1;UBERON:0001703!2.66e-07!1;UBERON:0004761!2.66e-07!1;UBERON:0009617!2.66e-07!1;UBERON:0002702!4.01e-07!1;UBERON:0000481!6.40e-07!347|ontology_enrichment_uberon_v019=UBERON:0002619;6.40e-42;22!UBERON:0002771;1.34e-40;2!UBERON:0000956;4.36e-37;25!UBERON:0000203;4.36e-37;25!UBERON:0001950;8.07e-34;20!UBERON:0002791;1.84e-33;32!UBERON:0001869;1.84e-33;32!UBERON:0003528;1.06e-30;34!UBERON:0002020;1.06e-30;34!UBERON:0001893;1.12e-30;34!UBERON:0001871;2.67e-26;6!UBERON:0002780;4.41e-25;41!UBERON:0001890;4.41e-25;41!UBERON:0003112;5.16e-21;1!UBERON:0011158;5.16e-21;1!UBERON:0003128;5.16e-21;1!UBERON:0001703;5.16e-21;1!UBERON:0002241;5.16e-21;1!UBERON:0000349;4.28e-17;5!UBERON:0002021;9.55e-17;5!UBERON:0000073;6.37e-16;53!UBERON:0002616;6.37e-16;53!UBERON:0000200;2.84e-14;6!UBERON:0001017;5.57e-12;75!UBERON:0001876;2.02e-11;2!UBERON:0001954;2.02e-11;2!UBERON:0003022;2.02e-11;2!UBERON:0002421;2.02e-11;2!UBERON:0002600;2.02e-11;2!UBERON:0001873;3.34e-11;2!UBERON:0002360;3.34e-11;2!UBERON:0000094;3.34e-11;2!UBERON:0010743;3.34e-11;2!UBERON:0002420;7.74e-10;9!UBERON:0007245;7.74e-10;9!UBERON:0010009;7.74e-10;9!UBERON:0010011;7.74e-10;9!UBERON:0000454;7.74e-10;9!UBERON:0000955;5.53e-09;68!UBERON:0005383;6.78e-08;3!UBERON:0005382;6.78e-08;3|ontology_enrichment_uberon_v019_2=UBERON:0002619,9.25e-42,22;UBERON:0002771,1.64e-40,2;UBERON:0002791,6.06e-38,32;UBERON:0001869,6.06e-38,32;UBERON:0000956,6.04e-37,25;UBERON:0000203,6.04e-37,25;UBERON:0003528,9.05e-36,34;UBERON:0002020,9.05e-36,34;UBERON:0001893,9.05e-36,34;UBERON:0001950,1.21e-33,20;UBERON:0002780,8.69e-30,41;UBERON:0001890,8.69e-30,41;UBERON:0003080,8.69e-30,41;UBERON:0006240,8.69e-30,41;UBERON:0001871,3.17e-26,6;UBERON:0000073,3.96e-23,53;UBERON:0002616,3.96e-23,53;UBERON:0001049,6.70e-22,56;UBERON:0005068,6.70e-22,56;UBERON:0006241,6.70e-22,56;UBERON:0007135,6.70e-22,56;UBERON:0003112,3.45e-21,1;UBERON:0011158,3.45e-21,1;UBERON:0003128,3.45e-21,1;UBERON:0001703,3.45e-21,1;UBERON:0002241,3.45e-21,1;UBERON:0004761,3.45e-21,1;UBERON:0009617,3.45e-21,1;UBERON:0003056,4.08e-20,61;UBE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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6854 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11495 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=152bp_to_BC040661_5end | |||
|coexpression_cluster_id=C32 | |||
|description=CAGE_peak_10_at_SYN2_5end | |||
|id=chr3:12225025..12225037,+ | |||
|ontology_enrichment_celltype=CL:0000242!3.92e-12!2 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;3.34e-11;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p10@SYN2 | |||
}} |
Revision as of 21:09, 12 September 2013
Short description: | p10@SYN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_SYN2_5end |
Coexpression cluster: | C32_middle_occipital_parietal_hippocampus_amygdala_medial_olfactory |
Association with transcript: | 152bp_to_BC040661_5end |
EntrezGene: | SYN2 |
HGNC: | 11495 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.