FFCP PHASE1:Hg19::chr22:46692747..46692847,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=51512|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=13698|TSSclassifier=S|UniProt=Q9NYZ3|association_with_transcript=0bp_to_ENST00000361934_5end|coexpression_cluster_id=C281|description=CAGE_peak_1_at_GTSE1_5end|id=chr22:46692747..46692847,+|ontology_enrichment_celltype=CL:0000548!4.00e-18!679;CL:0000004!4.00e-18!679;CL:0000255!4.00e-18!679;CL:0000012!1.36e-17!682;CL:0000066!6.79e-16!254;CL:0002321!1.17e-10!248;CL:0000003!3.13e-10!722;CL:0000220!3.24e-10!246;CL:0000055!4.11e-09!180;CL:0000144!4.22e-08!625;CL:0000333!8.37e-08!41;CL:0000063!2.03e-07!578;CL:0000133!5.77e-07!59|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=CL:0000066,7.01e-15,253;CL:0002321,2.30e-09,250;CL:0000333,6.70e-08,41;CL:0000133,7.19e-07,59|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:162!7.11e-34!235;DOID:14566!2.63e-32!239;DOID:2531!3.85e-19!51;DOID:0060083!3.85e-19!51;DOID:0050686!1.14e-18!137;DOID:1240!3.50e-15!39;DOID:0050687!6.05e-15!143;DOID:8692!5.30e-11!31;DOID:305!1.83e-10!106|ontology_enrichment_disease_v019=DOID:1240;1.84e-12;39!DOID:2531;3.53e-12;51!DOID:0060083;3.53e-12;51!DOID:8692;6.23e-11;31|ontology_enrichment_disease_v019_2=DOID:162,7.50e-33,235;DOID:14566,1.75e-31,239;DOID:2531,8.39e-20,51;DOID:0060083,8.39e-20,51;DOID:0050686,6.83e-18,137;DOID:1240,1.08e-15,39;DOID:0050687,4.77e-14,143;DOID:8692,2.34e-11,31;DOID:305,6.30e-10,106|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0.856402095563933,0.140954404095971,1.0007329835313,0,0,0,0,0,10.0750913965619,15.3516256953934,15.9462201655026,7.64924236862515,0.74259811776028,0.662794751455832,1.34465029290355,0.602694528023977,1.46062018077475,0.487932798790507,25.6091800799719,17.1360580645173,7.8363680369522,14.0255633694218,16.1511821586003,19.08248121841,19.2561782484837,17.4053249633885,23.5345236127901,0.786728553697808,0.383829398097213,0,4.59710612239464,6.92773613189975,1.84877005083394,14.0215633050346,9.95184627411951,1.46800219667424,0,0,0,0.223915474239924,0.32389366601898,0.257575567634187,0.145398238779565,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0.368277635987565,0,0,0,0,0.112328631146495,0,0,0.285012743741249,0,0,0,0,0,0.426730222566507,0.400395987036012,0,0,0,0,0,0,0,0,4.74091352595139,0,0,0.205601498999509,1.00311897234407,0,0,0,5.68193330114385,0,0.443067789167242,0,6.53265730600943,5.72261129263464,8.22189523018381,7.46145048021791,4.05724320029073,0,0,0,9.85791281468826,0,0,0,0,0,0,0,0.127986611154418,1.24930726552346,0.236777252044017,0,0.201606743224732,0,0.144824403882799,0,4.69490601792545,3.70801429346238,12.6503703334598,0.50133791063589,1.15877215168659,1.5905718941022,0.486634870302636,8.2245290932739,5.76496433402666,6.76327849837071,1.24430121722827,9.4716774956061,11.8651021691017,0,0,0,0.476981248610684,0.571994910780128,0,7.55297147993479,4.30117297553062,6.94281003215189,4.52246353539208,4.19499436209906,5.50236083880135,5.43386912995707,1.8089173141853,2.13459757612026,3.3472061276467,4.02829317109147,2.28081631715554,1.70843440283719,9.92690316933846,1.62028389576352,12.5019619597712,12.7981742396917,13.288154697032,7.66583187329416,11.3911879148175,8.24407847686833,0,0,3.92484646928281,0.496971951695318,5.06522046658319,0,5.16305917347865,8.86670955495893,5.60677600142307,5.33744978648525,1.72667283892012,3.11211035399766,4.04132016209064,8.82694276812677,3.48122083583342,0.576175924479999,16.8711430920334,2.18512053781224,7.98660550162229,1.34503812496621,15.7362228182645,16.3491673811813,15.4495887372473,2.85815839756851,13.5117749042945,1.34323515528495,3.56400857184616,2.47266929278557,8.19145225744224,7.18618141816238,14.8135780279578,19.1431335404105,9.14311581097804,10.0964852802593,5.51678032438235,1.95309476578576,5.44474479168101,14.7099501264867,0.213557388818567,2.11931901159562,12.9039171316293,3.81294358182224,2.57640540045629,1.48893485065272,15.3586462339552,5.74878330451072,7.82544700156755,0.552299391853796,0.80823028409406,8.16522062788213,5.74286959897549,7.96934783859292,0,2.18196896472668,1.14721838155602,8.78210684133087,11.2650303073262,10.4574548582567,7.15261279606056,6.81266297364197,9.85438869504741,3.12899064659632,1.92972281457866,2.76269842704961,0,0,8.75470320294845,10.1150814046861,8.43538604592187,8.38234192766194,10.0224544282507,9.72809538355496,4.04493924480493,6.47530834913642,7.31019598198142,9.59602091012043,14.0241773803446,8.6430542379594,1.47008711385542,0,0.982827216677626,0,26.0463228654644,7.01034099695747,4.97546649865724,0.768251997860379,1.1240175325762,8.34390471016536,3.42577247086559,8.47101593806844,11.4392826380754,5.77325368101093,4.75314660397815,0.939269553886573,5.34155856715973,5.09284063834272,3.61482889245737,2.37061319387782,3.43394464837949,0.492434012174795,1.17002132569619,5.64798416697167,0.93733833986777,1.51183915378974,2.83550194484773,7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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=51512 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13698 | |||
|TSSclassifier=S | |||
|UniProt=Q9NYZ3 | |||
|association_with_transcript=0bp_to_ENST00000361934_5end | |||
|coexpression_cluster_id=C281 | |||
|description=CAGE_peak_1_at_GTSE1_5end | |||
|id=chr22:46692747..46692847,+ | |||
|ontology_enrichment_celltype=CL:0000548!4.00e-18!679;CL:0000004!4.00e-18!679;CL:0000255!4.00e-18!679;CL:0000012!1.36e-17!682;CL:0000066!6.79e-16!254;CL:0002321!1.17e-10!248;CL:0000003!3.13e-10!722;CL:0000220!3.24e-10!246;CL:0000055!4.11e-09!180;CL:0000144!4.22e-08!625;CL:0000333!8.37e-08!41;CL:0000063!2.03e-07!578;CL:0000133!5.77e-07!59 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.01e-15,253;CL:0002321,2.30e-09,250;CL:0000333,6.70e-08,41;CL:0000133,7.19e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!7.11e-34!235;DOID:14566!2.63e-32!239;DOID:2531!3.85e-19!51;DOID:0060083!3.85e-19!51;DOID:0050686!1.14e-18!137;DOID:1240!3.50e-15!39;DOID:0050687!6.05e-15!143;DOID:8692!5.30e-11!31;DOID:305!1.83e-10!106 | |||
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|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p1@GTSE1 | |||
}} |
Revision as of 12:24, 12 September 2013
Short description: | p1@GTSE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_GTSE1_5end |
Coexpression cluster: | C281_Hodgkin_Reticulocytes_chronic_NK_acute_retinoblastoma_small |
Association with transcript: | 0bp_to_ENST00000361934_5end |
EntrezGene: | GTSE1 |
HGNC: | 13698 |
UniProt: | Q9NYZ3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.01e-15 | 253 |
embryonic cell | 2.30e-09 | 250 |
migratory neural crest cell | 6.70e-08 | 41 |
neurectodermal cell | 7.19e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
cancer | 7.50e-33 | 235 |
disease of cellular proliferation | 1.75e-31 | 239 |
hematologic cancer | 8.39e-20 | 51 |
immune system cancer | 8.39e-20 | 51 |
organ system cancer | 6.83e-18 | 137 |
leukemia | 1.08e-15 | 39 |
cell type cancer | 4.77e-14 | 143 |
myeloid leukemia | 2.34e-11 | 31 |
carcinoma | 6.30e-10 | 106 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.