FFCP PHASE1:Hg19::chr22:37420570..37420584,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4357|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=7223|TSSclassifier=N|UniProt=P25325,Q6FHN9|association_with_transcript=313bp_to_BT019636,CR541712_5end|coexpression_cluster_id=C5|description=CAGE_peak_11_at_MPST_5end|id=chr22:37420570..37420584,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002615;2.74e-10;3!CL:0000182;4.20e-10;12!CL:0002591;2.46e-08;1|ontology_enrichment_celltype_v019_2=CL:0002615,3.16e-10,3;CL:0000182,4.30e-10,12;CL:0002591,3.28e-08,1|ontology_enrichment_development_v019=UBERON:0004161;9.60e-11;11!UBERON:0009497;4.13e-09;13!UBERON:0006242;2.46e-08;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0002423;1.23e-17;25!UBERON:0002107;1.26e-13;19!UBERON:0006925;1.26e-13;19!UBERON:0005409;8.34e-11;22!UBERON:0000160;7.57e-10;17!UBERON:0004913;2.46e-08;1!UBERON:0003703;2.46e-08;1!UBERON:0001174;2.46e-08;1!UBERON:0004914;2.46e-08;1!UBERON:0002365;3.46e-08;31!UBERON:0002330;3.46e-08;31!UBERON:0001155;8.73e-08;9!UBERON:0004921;2.82e-07;33!UBERON:0002368;3.98e-07;33|ontology_enrichment_uberon_v019_2=UBERON:0009497,1.15e-17,25;UBERON:0000015,1.15e-17,25;UBERON:0002423,1.15e-17,25;UBERON:0006235,1.15e-17,25;UBERON:0004161,1.15e-17,25;UBERON:0008835,1.26e-15,22;UBERON:0003894,1.26e-15,22;UBERON:0009854,6.53e-15,23;UBERON:0007499,1.19e-13,25;UBERON:0002107,1.29e-13,19;UBERON:0006925,1.29e-13,19;UBERON:0008836,1.29e-13,19;UBERON:0009856,4.28e-13,26;UBERON:0002417,2.00e-10,60;UBERON:0000916,2.00e-10,60;UBERON:0000160,6.38e-10,17;UBERON:0005409,1.47e-09,25;UBERON:0003929,1.63e-09,54;UBERON:0004921,2.79e-09,118;UBERON:0004913,2.29e-08,1;UBERON:0003703,2.29e-08,1;UBERON:0001174,2.29e-08,1;UBERON:0004914,2.29e-08,1;UBERON:0001007,2.81e-08,145;UBERON:0001555,2.81e-08,145;UBERON:0007026,2.81e-08,145;UBERON:0002365,3.91e-08,31;UBERON:0002330,3.91e-08,31;UBERON:0001155,7.08e-08,9;UBERON:0005172,1.35e-07,54;UBERON:0005173,1.35e-07,54;UBERON:0004119,3.03e-07,160;UBERON:0000925,3.03e-07,160;UBERON:0006595,3.03e-07,160;UBERON:0002368,3.86e-07,35|phase1_expression=0,0,0,1.0007329835313,1.34088328328186,0,0,0,0.261185628199839,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0.157421562627358,0,0,0,0.919421224478927,0,0.739508020333575,0.154934401160603,0.142169232487422,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0.329851300186716,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0.419499436209906,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0,0,0.17859945656816,0,0,0,0.949265659568129,0.366403487860815,0,0,0,0,0.12663051166458,0,0.286836620748814,0.354668382198357,0,0,0,0.311211035399766,0,0,0.302714855289863,0,0,0.312160076830321,0,0,0.117434498643765,0,0.140450806702248,0,0,0,0,0.247266929278557,0,0,0.168336113954066,0,0,0,0.30648779579902,0.150238058906597,0.113432183160021,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0.169560592310488,0.386521706326594,0,0.286804595389004,0,0.265059536642971,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,12.6755034821831,26.5363348502959,8.86184860022106,0,0.122988438543114,0.171567810298526,0,1.1240175325762,0,0,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0.383382679165211,0,0.088048434013226,0,0,0,0.063497894292169,0,1.17217447210047,0,0,0,0,0,0,0,0.387815147273333,3.57656445851882,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0,0.300946099727719,0,2.0694614258501,0,0,0,0,0.343143423810856,0,0.215714200818617,0.213455115606889,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0,0.241718899183244,0.200506470303285,0.0920809889358963,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0.340187410553031,0.215915916102139,1.54227252690289,0,0,0,0,0,0,0,0,0,0,3.40035338437484,0,0,0,0,0,0,0.154048617114644,0,0,0.107420244868274,0,0,0,0,0.192190067365106,0,0.10115778085555,0.464845549297286,0,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0.318203247925937,0,0,0.274537029736055,0,0.202182481573316,0,0.421258456238981,0,0,0,0,0.141405431953713,1.13008116620243,0,0,0,0,0.655894752046633,0.405820753925408,0,0,0.143411352204052,0,0,0,0,0,0,0,0.192444225451024,0.670302275535787,1.08890984861323,1.41215701165169,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0.144269212976445,0,0,0,0.383010740264733,0.211673582723883,0,0,0,0.313359791546046,0,0.169291777801603,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0.33307196799782,0,2.9942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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4357 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=7223 | |||
|TSSclassifier=N | |||
|UniProt=P25325,Q6FHN9 | |||
|association_with_transcript=313bp_to_BT019636,CR541712_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_11_at_MPST_5end | |||
|id=chr22:37420570..37420584,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002615;2.74e-10;3!CL:0000182;4.20e-10;12!CL:0002591;2.46e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,3.16e-10,3;CL:0000182,4.30e-10,12;CL:0002591,3.28e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0004161;9.60e-11;11!UBERON:0009497;4.13e-09;13!UBERON:0006242;2.46e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;1.23e-17;25!UBERON:0002107;1.26e-13;19!UBERON:0006925;1.26e-13;19!UBERON:0005409;8.34e-11;22!UBERON:0000160;7.57e-10;17!UBERON:0004913;2.46e-08;1!UBERON:0003703;2.46e-08;1!UBERON:0001174;2.46e-08;1!UBERON:0004914;2.46e-08;1!UBERON:0002365;3.46e-08;31!UBERON:0002330;3.46e-08;31!UBERON:0001155;8.73e-08;9!UBERON:0004921;2.82e-07;33!UBERON:0002368;3.98e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009497,1.15e-17,25;UBERON:0000015,1.15e-17,25;UBERON:0002423,1.15e-17,25;UBERON:0006235,1.15e-17,25;UBERON:0004161,1.15e-17,25;UBERON:0008835,1.26e-15,22;UBERON:0003894,1.26e-15,22;UBERON:0009854,6.53e-15,23;UBERON:0007499,1.19e-13,25;UBERON:0002107,1.29e-13,19;UBERON:0006925,1.29e-13,19;UBERON:0008836,1.29e-13,19;UBERON:0009856,4.28e-13,26;UBERON:0002417,2.00e-10,60;UBERON:0000916,2.00e-10,60;UBERON:0000160,6.38e-10,17;UBERON:0005409,1.47e-09,25;UBERON:0003929,1.63e-09,54;UBERON:0004921,2.79e-09,118;UBERON:0004913,2.29e-08,1;UBERON:0003703,2.29e-08,1;UBERON:0001174,2.29e-08,1;UBERON:0004914,2.29e-08,1;UBERON:0001007,2.81e-08,145;UBERON:0001555,2.81e-08,145;UBERON:0007026,2.81e-08,145;UBERON:0002365,3.91e-08,31;UBERON:0002330,3.91e-08,31;UBERON:0001155,7.08e-08,9;UBERON:0005172,1.35e-07,54;UBERON:0005173,1.35e-07,54;UBERON:0004119,3.03e-07,160;UBERON:0000925,3.03e-07,160;UBERON:0006595,3.03e-07,160;UBERON:0002368,3.86e-07,35 | |||
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|short_description=p11@MPST | |||
}} |
Revision as of 11:49, 12 September 2013
Short description: | p11@MPST |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_MPST_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 313bp_to_BT019636, CR541712_5end |
EntrezGene: | MPST |
HGNC: | 7223 |
UniProt: | P25325Q6FHN9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 3.16e-10 | 3 |
hepatocyte | 4.30e-10 | 12 |
smooth muscle cell of the pulmonary artery | 3.28e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
epithelium of foregut-midgut junction | 1.15e-17 | 25 |
anatomical boundary | 1.15e-17 | 25 |
hepatobiliary system | 1.15e-17 | 25 |
foregut-midgut junction | 1.15e-17 | 25 |
septum transversum | 1.15e-17 | 25 |
hepatic diverticulum | 1.26e-15 | 22 |
liver primordium | 1.26e-15 | 22 |
digestive tract diverticulum | 6.53e-15 | 23 |
epithelial sac | 1.19e-13 | 25 |
liver | 1.29e-13 | 19 |
digestive gland | 1.29e-13 | 19 |
liver bud | 1.29e-13 | 19 |
sac | 4.28e-13 | 26 |
abdominal segment of trunk | 2.00e-10 | 60 |
abdomen | 2.00e-10 | 60 |
intestine | 6.38e-10 | 17 |
gastrointestinal system | 1.47e-09 | 25 |
gut epithelium | 1.63e-09 | 54 |
subdivision of digestive tract | 2.79e-09 | 118 |
hepatopancreatic ampulla | 2.29e-08 | 1 |
extrahepatic bile duct | 2.29e-08 | 1 |
common bile duct | 2.29e-08 | 1 |
duodenal papilla | 2.29e-08 | 1 |
digestive system | 2.81e-08 | 145 |
digestive tract | 2.81e-08 | 145 |
primitive gut | 2.81e-08 | 145 |
exocrine gland | 3.91e-08 | 31 |
exocrine system | 3.91e-08 | 31 |
colon | 7.08e-08 | 9 |
abdomen element | 1.35e-07 | 54 |
abdominal segment element | 1.35e-07 | 54 |
endoderm-derived structure | 3.03e-07 | 160 |
endoderm | 3.03e-07 | 160 |
presumptive endoderm | 3.03e-07 | 160 |
endocrine gland | 3.86e-07 | 35 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.