FFCP PHASE1:Hg19::chr22:36692965..36693006,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4627|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7579|TSSclassifier=N|UniProt=|association_with_transcript=362bp_to_ENST00000459960_5end|description=CAGE_peak_8_at_MYH9_5end|id=chr22:36692965..36693006,-|ontology_enrichment_celltype=CL:0000220!3.26e-09!246;CL:0000144!4.25e-09!625;CL:0002321!7.35e-09!248;CL:0000548!1.77e-07!679;CL:0000004!1.77e-07!679;CL:0000255!1.77e-07!679;CL:0000012!2.57e-07!682;CL:0002371!4.56e-07!591;CL:0000222!5.33e-07!119;CL:0000213!9.90e-07!57;CL:0000215!9.90e-07!57|ontology_enrichment_celltype_v019=CL:1000449;8.28e-08;15!CL:0002681;2.27e-07;12!CL:0002584;2.27e-07;12|ontology_enrichment_celltype_v019_2=CL:1000449,1.12e-07,15;CL:0000213,2.08e-07,58;CL:0000215,2.08e-07,58;CL:0002681,3.73e-07,12;CL:0002584,3.73e-07,12;CL:0002321,7.47e-07,250|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003914!2.56e-07!118;UBERON:0004876!3.32e-07!20;UBERON:0000353!9.84e-07!17|ontology_enrichment_uberon_v019=UBERON:0000353;4.22e-09;15!UBERON:0006555;8.28e-08;15!UBERON:0004819;8.28e-08;15!UBERON:0001285;8.28e-08;15!UBERON:0007684;8.28e-08;15!UBERON:0001225;2.27e-07;12!UBERON:0008987;2.27e-07;12|ontology_enrichment_uberon_v019_2=UBERON:0000353,1.13e-08,15;UBERON:0004211,1.12e-07,15;UBERON:0009773,1.12e-07,15;UBERON:0001231,1.12e-07,15;UBERON:0001285,1.12e-07,15;UBERON:0007684,1.12e-07,15;UBERON:0004208,1.12e-07,15;UBERON:0003914,2.99e-07,117;UBERON:0001225,3.73e-07,12;UBERON:0008987,3.73e-07,12;UBERON:0006555,5.83e-07,16;UBERON:0004819,5.83e-07,16;UBERON:0004876,7.64e-07,11|phase1_expression=0.363356758541113,2.78330681058278,0.704772020479856,2.00146596706261,2.68176656656373,0.872338524100369,0,0,0.261185628199839,0.737201809504527,2.09340350391728,0.873765488520689,1.58260186937072,1.36142988256051,0.994192127183747,0.672325146451775,1.80808358407193,1.46062018077475,3.90346239032406,1.10808952269109,1.63200552995402,0.626909442956176,0.85870796139317,1.36874425072884,0.753255837568817,0.534893840235659,0.57470412614962,0.393553906568396,0,0.383829398097213,0.464448369948228,0.919421224478927,1.8072355126695,1.10926203050036,0,0.426507697462265,0,0,2.4065333696417,1.30206522429511,0.447830948479849,0,0,0.581592955118259,0,0.242584061187816,0.697287110717054,0,0.309706370895104,0.863077176966451,0.768482119587302,0.709446689665756,0.689491361473237,0.645484683583826,1.35426486594342,0.752969358170419,0.818718450173537,0,1.53041946185451,0.320929027076094,0.639337125799041,1.31940520074686,0.598390972864896,0.852449501065388,4.06292934080018,1.70215567407342,0.622822248995575,2.00998932205395,1.0429658368404,0,0.605399502633369,0.736555271975129,0.316462387440884,0.211255286311942,0.212604299965044,0.419317291016752,0.336985893439485,0.300353785683013,0.48217676009124,0,0.79566670879636,0,1.75996244461323,0.546138611262131,0.889509253863555,0.426730222566507,0,0.574752439954483,0,0,0,0.587237189370939,0.764546456250458,2.64342657158052,0,0,0.786839080455332,3.14408610199332,1.43921049299656,0.167186495390678,0,0.946895611469467,0,0.445641827540694,0.883817722424512,0.886135578334485,0.541607727530031,0.640456598628376,0.130059347559878,0.493313713811028,0.552700035571697,0.289803085735052,0.741432815810302,0,0,0.679856056185397,0.766440987203842,0.68725489096526,0.253019692019503,0.318565414324097,0,0,0.150575119077773,0,0,0,0,0.201606743224732,1.87208137048455,0.724122019413995,0,1.34140171940727,0.383587685530591,0.722878304769133,0.50133791063589,0.724232594804119,0,1.45990461090791,0.945348171640679,4.65631734671384,1.66886092816939,0.261958150995425,0.728590576585084,1.11235332835329,0.324547393654683,0,0.930705723632056,0,0.571994910780128,0.371457501329565,1.59009925893364,0,0.347140501607594,1.69592382577203,2.09749718104953,3.57653454522088,2.29894463190492,3.10100111003195,1.42306505074684,0,1.61131726843659,0,1.46437234528902,0.735326160691737,0.81014194788176,0.446498641420399,0.898117490504679,1.0135033243499,0,2.84779697870439,0.916008719652036,0,0,0.872188104285069,2.48485975847659,0.886413581652058,0.662045904066094,0.860509862246441,1.06400514659507,2.80338800071154,1.06748995729705,4.19334832309172,0,0.538842688278752,0.490385709340376,0.151357427644931,0.576175924479999,0.468642863667593,0.312160076830321,0.570471821544449,0.448346041655403,1.05691048779388,0.323745888736263,0.561803226808994,0.204154171254893,1.47401180774122,0.309977343527296,0,2.47266929278557,0,0,0.673344455816265,1.00094815897571,0.277064115484183,0.438977620880838,1.5324389789951,1.20190447125277,0.567160915800105,3.7671823494661,0.640672166455702,2.11931901159562,2.10063767259082,0.412210116953756,2.06112432036503,1.67505170698431,1.0126579934476,0.584622030967192,3.78650661366172,0.552299391853796,0.80823028409406,2.13005755509969,1.0075209822764,1.69560592310488,0.57978255948989,0.818238361772504,0.286804595389004,0.3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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4627 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7579 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=362bp_to_ENST00000459960_5end | |||
|description=CAGE_peak_8_at_MYH9_5end | |||
|id=chr22:36692965..36693006,- | |||
|ontology_enrichment_celltype=CL:0000220!3.26e-09!246;CL:0000144!4.25e-09!625;CL:0002321!7.35e-09!248;CL:0000548!1.77e-07!679;CL:0000004!1.77e-07!679;CL:0000255!1.77e-07!679;CL:0000012!2.57e-07!682;CL:0002371!4.56e-07!591;CL:0000222!5.33e-07!119;CL:0000213!9.90e-07!57;CL:0000215!9.90e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:1000449;8.28e-08;15!CL:0002681;2.27e-07;12!CL:0002584;2.27e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:1000449,1.12e-07,15;CL:0000213,2.08e-07,58;CL:0000215,2.08e-07,58;CL:0002681,3.73e-07,12;CL:0002584,3.73e-07,12;CL:0002321,7.47e-07,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!2.56e-07!118;UBERON:0004876!3.32e-07!20;UBERON:0000353!9.84e-07!17 | |||
|ontology_enrichment_uberon_v019=UBERON:0000353;4.22e-09;15!UBERON:0006555;8.28e-08;15!UBERON:0004819;8.28e-08;15!UBERON:0001285;8.28e-08;15!UBERON:0007684;8.28e-08;15!UBERON:0001225;2.27e-07;12!UBERON:0008987;2.27e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000353,1.13e-08,15;UBERON:0004211,1.12e-07,15;UBERON:0009773,1.12e-07,15;UBERON:0001231,1.12e-07,15;UBERON:0001285,1.12e-07,15;UBERON:0007684,1.12e-07,15;UBERON:0004208,1.12e-07,15;UBERON:0003914,2.99e-07,117;UBERON:0001225,3.73e-07,12;UBERON:0008987,3.73e-07,12;UBERON:0006555,5.83e-07,16;UBERON:0004819,5.83e-07,16;UBERON:0004876,7.64e-07,11 | |||
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| |||
|short_description=p8@MYH9 | |||
}} |
Revision as of 11:45, 12 September 2013
Short description: | p8@MYH9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_MYH9_5end |
Coexpression cluster: | NA |
Association with transcript: | 362bp_to_ENST00000459960_5end |
EntrezGene: | MYH9 |
HGNC: | 7579 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 1.12e-07 | 15 |
lining cell | 2.08e-07 | 58 |
barrier cell | 2.08e-07 | 58 |
kidney cortical cell | 3.73e-07 | 12 |
renal cortical epithelial cell | 3.73e-07 | 12 |
embryonic cell | 7.47e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
parenchyma | 1.13e-08 | 15 |
nephron epithelium | 1.12e-07 | 15 |
renal tubule | 1.12e-07 | 15 |
nephron tubule | 1.12e-07 | 15 |
nephron | 1.12e-07 | 15 |
uriniferous tubule | 1.12e-07 | 15 |
nephrogenic mesenchyme | 1.12e-07 | 15 |
epithelial tube | 2.99e-07 | 117 |
cortex of kidney | 3.73e-07 | 12 |
renal parenchyma | 3.73e-07 | 12 |
excretory tube | 5.83e-07 | 16 |
kidney epithelium | 5.83e-07 | 16 |
urogenital ridge | 7.64e-07 | 11 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.