FFCP PHASE1:Hg19::chr22:36685324..36685335,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C634|description=CAGE_peak_at_chr22:36685324..36685335,-|id=chr22:36685324..36685335,-|ontology_enrichment_celltype=CL:0000144!1.99e-12!625;CL:0000003!4.12e-12!722;CL:0002371!1.29e-10!591;CL:0000548!3.52e-10!679;CL:0000004!3.52e-10!679;CL:0000255!3.52e-10!679;CL:0000012!1.88e-09!682;CL:0000220!5.13e-08!246;CL:0002321!1.05e-07!248;CL:0000063!1.17e-07!578|ontology_enrichment_celltype_v019=CL:1000449;2.14e-08;15!CL:1000497;4.20e-08;17!CL:0002518;4.20e-08;17!CL:0000077;6.60e-07;19|ontology_enrichment_celltype_v019_2=CL:1000449,2.27e-08,15;CL:1000497,6.59e-08,17;CL:0002518,6.59e-08,17;CL:1000746,6.20e-07,7;CL:1000612,6.20e-07,7;CL:0000077,8.40e-07,19|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004876!1.76e-07!20;UBERON:0003064!4.63e-07!37|ontology_enrichment_uberon_v019=UBERON:0006555;2.14e-08;15!UBERON:0004819;2.14e-08;15!UBERON:0001285;2.14e-08;15!UBERON:0007684;2.14e-08;15|ontology_enrichment_uberon_v019_2=UBERON:0004876,1.33e-08,11;UBERON:0004211,2.27e-08,15;UBERON:0009773,2.27e-08,15;UBERON:0001231,2.27e-08,15;UBERON:0001285,2.27e-08,15;UBERON:0007684,2.27e-08,15;UBERON:0004208,2.27e-08,15;UBERON:0006555,1.31e-07,16;UBERON:0004819,1.31e-07,16;UBERON:0010532,6.20e-07,7;UBERON:0000074,6.20e-07,7;UBERON:0001229,6.20e-07,7;UBERON:0001230,6.20e-07,7;UBERON:0003220,6.20e-07,7;UBERON:0005749,6.20e-07,7;UBERON:0004199,6.20e-07,7;UBERON:0004209,6.20e-07,7;UBERON:0004198,6.20e-07,7|phase1_expression=0.363356758541113,3.21150785836475,0.845726424575827,0,1.34088328328186,0.872338524100369,2.53299878168311,1.89515962028049,0.261185628199839,1.72013755551056,2.79120467188971,1.74753097704138,1.84636884759917,0.247532705920093,0.994192127183747,2.6893005858071,2.41077811209591,2.19093027116212,2.43966399395253,0.61560529038394,1.42800483870977,3.13454721478088,0.572471974262113,2.18999080116615,1.00434111675842,1.14620108621927,0.821005894499457,0.472264687882075,0.393364276848904,0.383829398097213,0.309632246632152,0.919421224478927,1.50602959389125,0.739508020333575,0.0774672005803016,0.426507697462265,0,0,1.20326668482085,0.868043482863407,0,0,0.257575567634187,1.16318591023652,0,0.485168122375632,0.929716147622738,0.822335776043652,0.619412741790207,0.863077176966451,0.512321413058201,0.47296445977717,0,0,1.35426486594342,0.752969358170419,0.818718450173537,0.449446968890169,1.22433556948361,0.320929027076094,1.27867425159808,0.989553900560148,0.199463657621632,0,1.7412554317715,0,1.86846674698672,1.25624332628372,0,0.65156653411535,1.21079900526674,0,0,0,0.637812899895131,0,0.112328631146495,0.300353785683013,0,0.570025487482497,0.39783335439818,0.182664153764634,0,0,0.889509253863555,0.426730222566507,0,0,0,0,1.1384259382189,0,0.764546456250458,0,0,0,0.590129310341499,1.57204305099666,2.46721798799411,0.334372990781356,0.32592226663359,0.473447805734733,0,0.222820913770347,0,0.886135578334485,0.541607727530031,1.0247305578054,1.69077151827842,1.15106533222573,0.552700035571697,0.289803085735052,0.741432815810302,0.535081656179426,2.09071047609954,0.566546713487831,1.14966148080576,0.68725489096526,0.253019692019503,0,0,0,0,0.127986611154418,1.24930726552346,0,0,0.604820229674197,1.60464117470104,1.30341963494519,4.87613732627923,0.670700859703636,0.639312809217652,0.361439152384566,1.50401373190767,1.30361867064741,0.795285947051099,0.486634870302636,1.89069634328136,3.54767035940102,2.45937399940753,0.261958150995425,1.09288586487763,1.85392221392215,0.649094787309367,0,0.797747763113191,0,0,0,0.79504962946682,0.860234595106124,1.73570250803797,0,1.25849830862972,3.85165258716094,0.835979866147242,1.29208379584664,0.35576626268671,1.00416183829401,1.61131726843659,0.760272105718513,3.90499292077071,1.10298924103761,4.86085168729056,0.357198913136319,0.44905874525234,0.225222960966644,0,0,0.549605231791222,0,0,1.3082821564276,0.993943903390637,1.39293562831038,0.529636723252875,1.14734648299525,1.41867352879343,1.12135520028461,1.06748995729705,3.94668077467456,0,0.269421344139376,0.163461903113459,0.454072282934794,0.576175924479999,0.234321431833797,0.312160076830321,0,0.896692083310806,0.352303495931295,0.161872944368132,0.702254033511242,0.204154171254893,1.47401180774122,0.309977343527296,2.37600571456411,3.70900393917835,0,1.43723628363248,0.505008341862199,0.125118519871964,0,0,1.5324389789951,1.35214253015937,0.113432183160021,5.02290979928813,1.06778694409284,0.635795703478686,2.10063767259082,0.618315175430633,2.57640540045629,0.744467425326359,0.337552664482532,0.389748020644795,3.28163906517349,0.368199594569197,0.161646056818812,3.90510551768276,1.0075209822764,1.18692414617341,0.386521706326594,1.09098448236334,0.286804595389004,0,0.265059536642971,0.348581828608555,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C634 | |||
|description=CAGE_peak_at_chr22:36685324..36685335,- | |||
|id=chr22:36685324..36685335,- | |||
|ontology_enrichment_celltype=CL:0000144!1.99e-12!625;CL:0000003!4.12e-12!722;CL:0002371!1.29e-10!591;CL:0000548!3.52e-10!679;CL:0000004!3.52e-10!679;CL:0000255!3.52e-10!679;CL:0000012!1.88e-09!682;CL:0000220!5.13e-08!246;CL:0002321!1.05e-07!248;CL:0000063!1.17e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:1000449;2.14e-08;15!CL:1000497;4.20e-08;17!CL:0002518;4.20e-08;17!CL:0000077;6.60e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:1000449,2.27e-08,15;CL:1000497,6.59e-08,17;CL:0002518,6.59e-08,17;CL:1000746,6.20e-07,7;CL:1000612,6.20e-07,7;CL:0000077,8.40e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004876!1.76e-07!20;UBERON:0003064!4.63e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;2.14e-08;15!UBERON:0004819;2.14e-08;15!UBERON:0001285;2.14e-08;15!UBERON:0007684;2.14e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004876,1.33e-08,11;UBERON:0004211,2.27e-08,15;UBERON:0009773,2.27e-08,15;UBERON:0001231,2.27e-08,15;UBERON:0001285,2.27e-08,15;UBERON:0007684,2.27e-08,15;UBERON:0004208,2.27e-08,15;UBERON:0006555,1.31e-07,16;UBERON:0004819,1.31e-07,16;UBERON:0010532,6.20e-07,7;UBERON:0000074,6.20e-07,7;UBERON:0001229,6.20e-07,7;UBERON:0001230,6.20e-07,7;UBERON:0003220,6.20e-07,7;UBERON:0005749,6.20e-07,7;UBERON:0004199,6.20e-07,7;UBERON:0004209,6.20e-07,7;UBERON:0004198,6.20e-07,7 | |||
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| |||
|short_description=p@chr22:36685324..36685335,- | |||
}} |
Revision as of 11:45, 12 September 2013
Short description: | p@chr22:36685324..36685335, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr22:36685324..36685335, - |
Coexpression cluster: | C634_Neutrophils_mesothelioma_Olfactory_Hair_Prostate_Alveolar_Lens |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 2.27e-08 | 15 |
kidney cell | 6.59e-08 | 17 |
kidney epithelial cell | 6.59e-08 | 17 |
glomerular cell | 6.20e-07 | 7 |
kidney corpuscule cell | 6.20e-07 | 7 |
mesothelial cell | 8.40e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
urogenital ridge | 1.33e-08 | 11 |
nephron epithelium | 2.27e-08 | 15 |
renal tubule | 2.27e-08 | 15 |
nephron tubule | 2.27e-08 | 15 |
nephron | 2.27e-08 | 15 |
uriniferous tubule | 2.27e-08 | 15 |
nephrogenic mesenchyme | 2.27e-08 | 15 |
excretory tube | 1.31e-07 | 16 |
kidney epithelium | 1.31e-07 | 16 |
primitive nephron | 6.20e-07 | 7 |
renal glomerulus | 6.20e-07 | 7 |
renal corpuscle | 6.20e-07 | 7 |
glomerular capsule | 6.20e-07 | 7 |
metanephric mesenchyme | 6.20e-07 | 7 |
glomerular tuft | 6.20e-07 | 7 |
S-shaped body | 6.20e-07 | 7 |
renal vesicle | 6.20e-07 | 7 |
comma-shaped body | 6.20e-07 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.