FFCP PHASE1:Hg19::chr21:18885430..18885446,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1525|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2559|TSSclassifier=S|UniProt=D3YHP0,B7WPI3|association_with_transcript=-1bp_to_ENST00000306618,ENST00000356275,ENST00000400165,ENST00000400169_5end|description=CAGE_peak_3_at_CXADR_5end|id=chr21:18885430..18885446,+|ontology_enrichment_celltype=CL:0000066!6.62e-09!254|ontology_enrichment_celltype_v019=CL:0002563;2.26e-07;4|ontology_enrichment_celltype_v019_2=CL:0002563,3.44e-07,4|ontology_enrichment_development_v019=UBERON:0005754;3.30e-08;1|ontology_enrichment_disease=DOID:305!1.75e-11!106;DOID:0050687!8.15e-08!143|ontology_enrichment_disease_v019=DOID:6193;8.77e-08;1|ontology_enrichment_disease_v019_2=DOID:6193,5.70e-08,1|ontology_enrichment_uberon=UBERON:0002780!2.04e-22!41;UBERON:0001890!2.04e-22!41;UBERON:0006240!2.04e-22!41;UBERON:0003080!1.34e-21!42;UBERON:0007023!3.80e-20!115;UBERON:0001869!1.21e-17!32;UBERON:0003056!1.33e-17!61;UBERON:0001893!2.97e-17!34;UBERON:0001049!1.44e-16!57;UBERON:0005068!1.44e-16!57;UBERON:0006241!1.44e-16!57;UBERON:0007135!1.44e-16!57;UBERON:0002791!1.47e-16!33;UBERON:0002619!1.79e-16!22;UBERON:0001950!5.36e-15!20;UBERON:0005743!7.28e-15!86;UBERON:0002020!1.06e-14!34;UBERON:0003528!1.06e-14!34;UBERON:0002616!1.10e-14!59;UBERON:0001017!8.86e-14!82;UBERON:0000956!1.01e-13!25;UBERON:0000203!1.01e-13!25;UBERON:0003075!1.92e-13!86;UBERON:0007284!1.92e-13!86;UBERON:0000955!4.52e-13!69;UBERON:0006238!4.52e-13!69;UBERON:0000153!2.59e-12!129;UBERON:0007811!2.59e-12!129;UBERON:0002346!3.19e-12!90;UBERON:0000073!4.31e-12!94;UBERON:0001016!4.31e-12!94;UBERON:0000033!1.28e-11!123;UBERON:0000062!3.32e-11!511;UBERON:0000481!3.81e-11!347;UBERON:0004119!9.23e-11!169;UBERON:0000925!9.23e-11!169;UBERON:0006595!9.23e-11!169;UBERON:0004921!1.45e-10!129;UBERON:0004185!1.45e-10!129;UBERON:0001007!3.02e-10!155;UBERON:0001555!3.02e-10!155;UBERON:0007026!3.02e-10!155;UBERON:0000922!5.93e-09!612;UBERON:0004121!6.74e-09!169;UBERON:0000467!2.10e-08!625;UBERON:0000480!2.56e-08!626;UBERON:0000924!2.62e-08!173;UBERON:0006601!2.62e-08!173;UBERON:0000477!6.05e-08!286;UBERON:0000923!1.03e-07!604;UBERON:0005291!1.03e-07!604;UBERON:0006598!1.03e-07!604;UBERON:0002532!1.03e-07!604;UBERON:0002050!1.24e-07!605;UBERON:0005423!1.24e-07!605;UBERON:0004111!1.27e-07!241;UBERON:0000468!1.43e-07!659;UBERON:0005911!2.73e-07!82;UBERON:0000064!3.88e-07!219;UBERON:0001894!7.96e-07!7;UBERON:0006222!7.96e-07!7|ontology_enrichment_uberon_v019=UBERON:0005409;4.69e-17;22!UBERON:0000160;4.97e-17;17!UBERON:0002108;1.79e-12;4!UBERON:0004921;2.02e-11;33!UBERON:0006947;7.94e-10;3!UBERON:0004054;7.94e-10;3!UBERON:0000998;3.30e-08;1!UBERON:0006868;3.30e-08;1!UBERON:0002022;8.77e-08;1!UBERON:0001000;8.77e-08;1!UBERON:0005352;8.77e-08;1!UBERON:0001950;1.34e-07;20!UBERON:0005904;1.42e-07;4!UBERON:0001242;2.26e-07;4!UBERON:0001262;2.26e-07;4!UBERON:0004786;2.26e-07;4!UBERON:0004808;2.26e-07;4!UBERON:0001277;2.26e-07;4!UBERON:0001155;4.13e-07;9!UBERON:0002619;6.44e-07;22|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.47e-17,17;UBERON:0005409,4.17e-15,25;UBERON:0002108,7.45e-13,4;UBERON:0006947,9.30e-10,3;UBERON:0004054,9.30e-10,3;UBERON:0011216,2.00e-08,223;UBERON:0000998,3.55e-08,1;UBERON:0006868,3.55e-08,1;UBERON:0002022,4.66e-08,1;UBERON:0001000,1.04e-07,1;UBERON:0005352,1.04e-07,1;UBERON:0001950,1.14e-07,20;UBERON:0005904,1.59e-07,4;UBERON:0001242,3.44e-07,4;UBERON:0001262,3.44e-07,4;UBERON:0004786,3.44e-07,4;UBERON:0004808,3.44e-07,4;UBERON:0001277,3.44e-07,4;UBERON:0001155,4.14e-07,9;UBERON:0002619,5.56e-07,22;UBERON:0004921,9.52e-07,118;UBERON:0002780,9.52e-07,41;UBERON:0001890,9.52e-07,41;UBERON:0003080,9.52e-07,41;UBERON:0006240,9.52e-07,41|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0.976248230192678,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0,0.121973706129595,0,0.232387885739037,0,0.252320850875628,0,0,0,0,0,0,0,0.337169380156203,0.241011029883482,0,0,0.237270619111097,0.539325232640658,0.784885860501384,0,0,0,0,0,0,0,1.18157981336281,0,1.10689594688802,0.343135620597051,0.329250856225877,0,0.201057944823262,0.185176890317059,0,0,0,0,0.234817388471643,0,0.462985512576611,0,0,0,0,0,0,0,0.839910640994298,0.425325291727159,0,0,0,0,0,0,0,0.12624243342638,0.126995788584338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399891964728228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502548796003046,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1525 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2559 | |||
|TSSclassifier=S | |||
|UniProt=D3YHP0,B7WPI3 | |||
|association_with_transcript=-1bp_to_ENST00000306618,ENST00000356275,ENST00000400165,ENST00000400169_5end | |||
|description=CAGE_peak_3_at_CXADR_5end | |||
|id=chr21:18885430..18885446,+ | |||
|ontology_enrichment_celltype=CL:0000066!6.62e-09!254 | |||
|ontology_enrichment_celltype_v019=CL:0002563;2.26e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.44e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0005754;3.30e-08;1 | |||
|ontology_enrichment_disease=DOID:305!1.75e-11!106;DOID:0050687!8.15e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:6193;8.77e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,5.70e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002780!2.04e-22!41;UBERON:0001890!2.04e-22!41;UBERON:0006240!2.04e-22!41;UBERON:0003080!1.34e-21!42;UBERON:0007023!3.80e-20!115;UBERON:0001869!1.21e-17!32;UBERON:0003056!1.33e-17!61;UBERON:0001893!2.97e-17!34;UBERON:0001049!1.44e-16!57;UBERON:0005068!1.44e-16!57;UBERON:0006241!1.44e-16!57;UBERON:0007135!1.44e-16!57;UBERON:0002791!1.47e-16!33;UBERON:0002619!1.79e-16!22;UBERON:0001950!5.36e-15!20;UBERON:0005743!7.28e-15!86;UBERON:0002020!1.06e-14!34;UBERON:0003528!1.06e-14!34;UBERON:0002616!1.10e-14!59;UBERON:0001017!8.86e-14!82;UBERON:0000956!1.01e-13!25;UBERON:0000203!1.01e-13!25;UBERON:0003075!1.92e-13!86;UBERON:0007284!1.92e-13!86;UBERON:0000955!4.52e-13!69;UBERON:0006238!4.52e-13!69;UBERON:0000153!2.59e-12!129;UBERON:0007811!2.59e-12!129;UBERON:0002346!3.19e-12!90;UBERON:0000073!4.31e-12!94;UBERON:0001016!4.31e-12!94;UBERON:0000033!1.28e-11!123;UBERON:0000062!3.32e-11!511;UBERON:0000481!3.81e-11!347;UBERON:0004119!9.23e-11!169;UBERON:0000925!9.23e-11!169;UBERON:0006595!9.23e-11!169;UBERON:0004921!1.45e-10!129;UBERON:0004185!1.45e-10!129;UBERON:0001007!3.02e-10!155;UBERON:0001555!3.02e-10!155;UBERON:0007026!3.02e-10!155;UBERON:0000922!5.93e-09!612;UBERON:0004121!6.74e-09!169;UBERON:0000467!2.10e-08!625;UBERON:0000480!2.56e-08!626;UBERON:0000924!2.62e-08!173;UBERON:0006601!2.62e-08!173;UBERON:0000477!6.05e-08!286;UBERON:0000923!1.03e-07!604;UBERON:0005291!1.03e-07!604;UBERON:0006598!1.03e-07!604;UBERON:0002532!1.03e-07!604;UBERON:0002050!1.24e-07!605;UBERON:0005423!1.24e-07!605;UBERON:0004111!1.27e-07!241;UBERON:0000468!1.43e-07!659;UBERON:0005911!2.73e-07!82;UBERON:0000064!3.88e-07!219;UBERON:0001894!7.96e-07!7;UBERON:0006222!7.96e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;4.69e-17;22!UBERON:0000160;4.97e-17;17!UBERON:0002108;1.79e-12;4!UBERON:0004921;2.02e-11;33!UBERON:0006947;7.94e-10;3!UBERON:0004054;7.94e-10;3!UBERON:0000998;3.30e-08;1!UBERON:0006868;3.30e-08;1!UBERON:0002022;8.77e-08;1!UBERON:0001000;8.77e-08;1!UBERON:0005352;8.77e-08;1!UBERON:0001950;1.34e-07;20!UBERON:0005904;1.42e-07;4!UBERON:0001242;2.26e-07;4!UBERON:0001262;2.26e-07;4!UBERON:0004786;2.26e-07;4!UBERON:0004808;2.26e-07;4!UBERON:0001277;2.26e-07;4!UBERON:0001155;4.13e-07;9!UBERON:0002619;6.44e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.47e-17,17;UBERON:0005409,4.17e-15,25;UBERON:0002108,7.45e-13,4;UBERON:0006947,9.30e-10,3;UBERON:0004054,9.30e-10,3;UBERON:0011216,2.00e-08,223;UBERON:0000998,3.55e-08,1;UBERON:0006868,3.55e-08,1;UBERON:0002022,4.66e-08,1;UBERON:0001000,1.04e-07,1;UBERON:0005352,1.04e-07,1;UBERON:0001950,1.14e-07,20;UBERON:0005904,1.59e-07,4;UBERON:0001242,3.44e-07,4;UBERON:0001262,3.44e-07,4;UBERON:0004786,3.44e-07,4;UBERON:0004808,3.44e-07,4;UBERON:0001277,3.44e-07,4;UBERON:0001155,4.14e-07,9;UBERON:0002619,5.56e-07,22;UBERON:0004921,9.52e-07,118;UBERON:0002780,9.52e-07,41;UBERON:0001890,9.52e-07,41;UBERON:0003080,9.52e-07,41;UBERON:0006240,9.52e-07,41 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0.976248230192678,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0,0.121973706129595,0,0.232387885739037,0,0.252320850875628,0,0,0,0,0,0,0,0.337169380156203,0.241011029883482,0,0,0.237270619111097,0.539325232640658,0.784885860501384,0,0,0,0,0,0,0,1.18157981336281,0,1.10689594688802,0.343135620597051,0.329250856225877,0,0.201057944823262,0.185176890317059,0,0,0,0,0.234817388471643,0,0.462985512576611,0,0,0,0,0,0,0,0.839910640994298,0.425325291727159,0,0,0,0,0,0,0,0.12624243342638,0.126995788584338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399891964728228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502548796003046,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57117284469109,0.601519410909855,0.552485933615378,0,0,0,0,0.231046011313244,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0.512900250232778,0,0.325378394664303,0.515205058238611,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0.826424576804891,0,0.255225424989168,0.50578890427775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,1.12972560932135,0,1.68471475667626,0,0.689170200620878,0,0,0,0,0,0,0,0,0.640944426764839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0,0,0,0.23874448473769,0,0,1.9882952955326,0.140669416410513,0,0,0.211125408127993,0.398495976502139,0,0,0.715880777515084,0,0,0,0.179021174675609,0,0.591860433821602,0,0,0,0.463840490809256,0,0,0.349839999984783,0,0.341380344856499,0.254253650292766,0.709163045303809,0,0,0,0,0.964771509003264,0,0,0,0,0.32681539055697,0.975966209950223,0.461701551022782,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,1.13082457147153,0,0,1.50377859655677,2.4441205797345,0,0,0,0.134802265961354,0,0.702793337176017,0,0.978323094660449,0.242780379534093,1.18375320854817,0,0.61214552326098,0,0,0.414752765588989,0,0,0,0,0,0,0.347119476670262,0.0979923974143777,0.0870592065804026,0.34945333648406,1.54787429224455,0.387025325156341,0.438535902517113,0.164230914106418,0.581934098930517,0,0.451961481561065,0,0,1.01297273529406,0.586654148204409,0,0.213452994739353,0,0.144090417154106,0.114536596165916,0,0.14405479798815,0,0.707082103850386,0,0,0,0,1.20084057741958,0.136905378891993,0,0,0,0,0,0,0.998395002494955,0,0,0.268733889946905,0,1.16495949527454,0.86661500537946,0.412079291905832,0.606631894687664,0,0,0.795229689809303,0.272406812223151,0.160753148465019,0.275078873194468,0.83088067605837,0.899895566206002,0.77380195455795,1.70098758642469,0.670869375198532,0.551639951094387,0.104909176269996,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0.113312091520126,0.58620893471233,0,0,0,0.171086837884329,0,0.854299300541557,0.157204305099666,0.828478110694391,0,0,0,0,0,0,0,0,0.628216385000937,0.886068179966986,0.732157589411779,0.500763722825999,0.573409195690071,0,0.124192805882767,0.138348634936231,0,0,0,0,0,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0.380805212168795,0,0,0.107410557042488,0,0,0,0,0,0,0.192619830407303,0.428883182749851,0.260994291965212,0,0,0,0,0,0.657852148736121,0,0.578742114812744,1.01365464391844,0,0,0,0.691292180758654,0,0,0,0,0,0,0,0,0,0,0,0.559518030877778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.706521476061055,1.41696576325585,0.319267718114302,0,0.252071696221718,0.760729777106397,0.645902582527404,0,0,0,0.550285795565037,0,0,0,0,0.150420656698515,0,2.34454203369928,0,0.163771917510097,0.295712172434091,0.472763092328763,0.781078098613847,0.206686796501184,0.634158101939068,3.28184885410932,0,0,0,0.127762427639595,1.07140367175657,0.336283722218824,0.606965604236632,0.455324382702595,0,0,0,0.0679697329768317,0.460409414939944,0.118193840883968,0.222462803784138,0.313972371402056,0.785577949580009,0.560544326627578,0,0.431855182437243,0,0.214429632529969,0,0.581207126840626,0,0,0,0.3414369541879,0,0,0,0,2.11693525095465,0.4582137370881,0,0,0,0.490751168076215,1.09726132484042,0,0,0,0.971421986118279,0,1.39265542612958,0,0.79062257427272,0,1.50962843566674,3.47283711485751,1.96703604453562,0,0.245148321753905,0.471353094203252,0.196308467114945,0,0,0,0,0,0,0.535661815816973,0,0.401206833445841,1.46067277649303,0,0,0.157771562193185,0.407948941145488,1.74540276136151,0.5290268405154,0,0,0,0,0.109265571963696,0.126698501011437,0.407955318967927,0.801652215796681,0,0.50141507858475,0.378893491091197,0.267964130156178,0.829169439458779,0.103432995861895,0.852935927603924,0.9522577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| |||
|short_description=p3@CXADR | |||
}} |
Revision as of 09:52, 12 September 2013
Short description: | p3@CXADR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_CXADR_5end |
Coexpression cluster: | NA |
Association with transcript: | -1bp_to_ENST00000306618, ENST00000356275, ENST00000400165, ENST00000400169_5end |
EntrezGene: | CXADR |
HGNC: | 2559 |
UniProt: | D3YHP0B7WPI3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.44e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.47e-17 | 17 |
gastrointestinal system | 4.17e-15 | 25 |
small intestine | 7.45e-13 | 4 |
male genital duct | 9.30e-10 | 3 |
internal male genitalia | 9.30e-10 | 3 |
organ system subdivision | 2.00e-08 | 223 |
seminal vesicle | 3.55e-08 | 1 |
seminal fluid secreting gland | 3.55e-08 | 1 |
insula | 4.66e-08 | 1 |
vas deferens | 1.04e-07 | 1 |
spermatic cord | 1.04e-07 | 1 |
neocortex | 1.14e-07 | 20 |
duct of male reproductive system | 1.59e-07 | 4 |
intestinal mucosa | 3.44e-07 | 4 |
wall of intestine | 3.44e-07 | 4 |
gastrointestinal system mucosa | 3.44e-07 | 4 |
gastrointestinal system epithelium | 3.44e-07 | 4 |
intestinal epithelium | 3.44e-07 | 4 |
colon | 4.14e-07 | 9 |
regional part of cerebral cortex | 5.56e-07 | 22 |
subdivision of digestive tract | 9.52e-07 | 118 |
regional part of forebrain | 9.52e-07 | 41 |
forebrain | 9.52e-07 | 41 |
anterior neural tube | 9.52e-07 | 41 |
future forebrain | 9.52e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 5.70e-08 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.