FFCP PHASE1:Hg19::chr20:60962143..60962171,+: Difference between revisions
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{{FFCP | 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77151,69.2744467770777,265.850934655645,117.47369073727,124.36072296802,653.376709441268,497.486715377951,46.1514486912687,98.5276147971479,419.824522819855,652.260940695093,213.108747089146,156.330011966422,870.805611415943,315.039758575776,366.860977480438,410.866451582863,96.4218580943094,769.210261914913,412.424577206108,690.043482768938,1232.2303675904,736.446247435433,769.940331693714,1038.27201204477,474.971004137586,411.322034539445,300.803318799827,256.572552415703,1082.75906073918,816.153000682826,851.385194628893,1078.17450709892,397.99919730981,511.811449075567,580.096238120354,346.794961560402,862.90193691562,389.54021643343,457.819529995341,887.519407994864,603.876220968493,312.521809001802,832.469592796389,448.35964539302,139.453703701056,395.155685391155,663.147387869747,341.246463881436,642.218590851931,223.791652511038,102.481008112845,174.134159764361,471.547743258692,213.061542060328,103.197078645697,509.300130593438,629.402633584943,2987.60798394505,422.711519718538,570.39271922053,475.243537607104,192.505060172399,610.102631001045,91.2445798362075,390.533867854638,496.756203243961,558.736517286461,582.803467704218,679.223702534349,361.088307877996,316.760893122753,750.055125987707,361.040457286615,1068.60240365698,849.935925797781,671.144082685688,131.172926615772,272.78748449899,289.380134371114,152.356802904572,323.475950543788,261.870874610114,197.771241917851,95.3467611584377,1426.42942388798,207.871618936487,169.980555913862,433.909478558644,391.857129742647,164.473713461623,198.025009089179,303.386245169964,404.33003519071,381.550261512833,1175.81019912746,948.105008235025,312.072453396594,370.636058762451,339.351412715326,626.477124508567,508.820150198114,1534.88194114788|short_description=p1@RPS21}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=6227 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10409 | |||
|TSSclassifier=S | |||
|UniProt=Q13666 | |||
|association_with_transcript=-2bp_to_ENST00000337102_5end | |||
|description=CAGE_peak_1_at_RPS21_5end | |||
|id=chr20:60962143..60962171,+ | |||
|ontology_enrichment_celltype=CL:0000003!7.40e-21!722;CL:0000012!4.27e-19!682;CL:0000548!1.75e-17!679;CL:0000004!1.75e-17!679;CL:0000255!1.75e-17!679;CL:0000542!9.11e-11!53;CL:0000051!9.11e-11!53;CL:0000838!1.05e-10!52;CL:0000144!1.38e-10!625;CL:0000063!2.16e-09!578;CL:0000791!2.04e-08!18;CL:0000789!2.04e-08!18;CL:0002420!2.04e-08!18;CL:0002419!2.04e-08!18;CL:0000790!2.04e-08!18;CL:0002371!5.10e-08!591;CL:0000084!1.32e-07!25;CL:0000827!1.32e-07!25;CL:0000236!2.20e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.03e-08;18!CL:0000789;2.03e-08;18!CL:0002419;2.03e-08;18!CL:0000084;1.31e-07;25!CL:0000236;1.44e-07;13!CL:0000542;1.83e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,9.11e-11,53;CL:0000051,9.11e-11,53;CL:0000838,1.05e-10,52;CL:0000791,2.04e-08,18;CL:0000789,2.04e-08,18;CL:0002420,2.04e-08,18;CL:0002419,2.04e-08,18;CL:0000790,2.04e-08,18;CL:0000084,1.32e-07,25;CL:0000827,1.32e-07,25;CL:0000236,2.20e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000790;2.03e-08;18!CL:0000051;1.83e-07;53 | |||
|ontology_enrichment_disease=DOID:162!9.82e-13!235;DOID:14566!1.12e-12!239;DOID:0050686!1.62e-08!137;DOID:0050687!2.17e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,9.82e-13,235;DOID:14566,1.12e-12,239;DOID:0050686,1.62e-08,137;DOID:0050687,2.17e-08,143 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p1@RPS21 | |||
}} |
Revision as of 09:31, 12 September 2013
Short description: | p1@RPS21 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_RPS21_5end |
Coexpression cluster: | NA |
Association with transcript: | -2bp_to_ENST00000337102_5end |
EntrezGene: | RPS21 |
HGNC: | 10409 |
UniProt: | Q13666 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 9.11e-11 | 53 |
common lymphoid progenitor | 9.11e-11 | 53 |
lymphoid lineage restricted progenitor cell | 1.05e-10 | 52 |
mature alpha-beta T cell | 2.04e-08 | 18 |
alpha-beta T cell | 2.04e-08 | 18 |
immature T cell | 2.04e-08 | 18 |
mature T cell | 2.04e-08 | 18 |
immature alpha-beta T cell | 2.04e-08 | 18 |
T cell | 1.32e-07 | 25 |
pro-T cell | 1.32e-07 | 25 |
B cell | 2.20e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
cancer | 9.82e-13 | 235 |
disease of cellular proliferation | 1.12e-12 | 239 |
organ system cancer | 1.62e-08 | 137 |
cell type cancer | 2.17e-08 | 143 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.