FFCP PHASE1:Hg19::chr20:50179425..50179434,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4773|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7776|TSSclassifier=S|UniProt=F8W8G4|association_with_transcript=-86bp_to_ENST00000371567_5end|description=CAGE_peak_7_at_NFATC2_5end|id=chr20:50179425..50179434,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000136;4.51e-12;13!CL:0002363;1.57e-09;2|ontology_enrichment_celltype_v019_2=CL:0000136,1.55e-10,15;CL:0002363,1.86e-09,2;CL:0000008,1.86e-09,2|ontology_enrichment_development_v019=UBERON:0008801;1.03e-17;1!CL:0000008;1.57e-09;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:1909;9.87e-10;2|ontology_enrichment_disease_v019_2=DOID:1909,8.69e-10,2|ontology_enrichment_uberon=UBERON:0007023!1.49e-20!115;UBERON:0003075!2.21e-13!86;UBERON:0007284!2.21e-13!86;UBERON:0001049!2.72e-13!57;UBERON:0005068!2.72e-13!57;UBERON:0006241!2.72e-13!57;UBERON:0007135!2.72e-13!57;UBERON:0002346!2.33e-12!90;UBERON:0001017!6.62e-12!82;UBERON:0005743!8.47e-12!86;UBERON:0000073!1.32e-10!94;UBERON:0001016!1.32e-10!94;UBERON:0002616!2.56e-10!59;UBERON:0003076!6.22e-10!15;UBERON:0003057!6.22e-10!15;UBERON:0000955!3.26e-09!69;UBERON:0006238!3.26e-09!69;UBERON:0004733!2.44e-08!12;UBERON:0002028!2.44e-08!12;UBERON:0007277!2.44e-08!12;UBERON:0002020!1.05e-07!34;UBERON:0003528!1.05e-07!34;UBERON:0004732!1.46e-07!13;UBERON:0004121!1.60e-07!169;UBERON:0002298!1.78e-07!8;UBERON:0000924!4.16e-07!173;UBERON:0006601!4.16e-07!173;UBERON:0002791!6.41e-07!33;UBERON:0002780!9.03e-07!41;UBERON:0001890!9.03e-07!41;UBERON:0006240!9.03e-07!41|ontology_enrichment_uberon_v019=UBERON:0001831;1.03e-17;1!UBERON:0001567;1.03e-17;1!UBERON:0002298;3.64e-12;6!UBERON:0002148;9.87e-10;2!UBERON:0006331;9.87e-10;2!UBERON:0009662;9.87e-10;2!UBERON:0001829;1.57e-09;2!UBERON:0003566;1.57e-09;2!UBERON:0001777;1.57e-09;2!UBERON:0004089;1.57e-09;2!UBERON:0001456;1.23e-07;21!UBERON:0000988;6.69e-07;3!UBERON:0001896;6.69e-07;3!UBERON:0005290;6.69e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0001831,1.22e-17,1;UBERON:0001567,1.22e-17,1;UBERON:0008801,1.22e-17,1;UBERON:0002298,4.07e-12,6;UBERON:0002148,1.12e-09,2;UBERON:0006331,1.12e-09,2;UBERON:0009662,1.12e-09,2;UBERON:0001829,1.71e-09,2;UBERON:0004089,1.71e-09,2;UBERON:0003566,1.86e-09,2;UBERON:0001777,1.86e-09,2;UBERON:0001456,2.69e-07,22;UBERON:0001896,6.88e-07,3;UBERON:0005290,6.88e-07,3;UBERON:0010096,6.88e-07,3;UBERON:0000988,7.28e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.973269740605272,0,0,0.175669571386252,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0.213557388818567,0,0.300091096084402,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288239906833923,0.12624243342638,0,0.381988425558278,0,0,0.205654985406647,0,3.14409075893636,0,0,0,0.258543431515556,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0.508189248444927,0,0.773288812777695,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,1.13733384070897,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92495971052672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0.284136146806413,0,0,0,0,0,0.222617410045812,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0.331737779793674,0.295547618953547,0.438770794307945,0.10893846351899,0,0.384751292518985,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.337005664903385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.34945333648406,0.343972064943233,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0.558564802544508,0.229160424011684,0,0,0.429226048136571,0,0.0671834724867263,0.360299883542404,0,0,0,0,0.0984274815147488,0,0,0.272406812223151,0,0.137539436597234,0,0,0,0.182248669974074,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0.25426853765475,0,0,0,1.19730191562487,0,0,0.226624183040251,0,0,2.19781025814636,0.13223260174269,0,0,0.106787412567695,0.471612915298998,0,0,0,0,0,2.72008901684737,1.0027595760908,1.2253823070538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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4773 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7776 | |||
|TSSclassifier=S | |||
|UniProt=F8W8G4 | |||
|association_with_transcript=-86bp_to_ENST00000371567_5end | |||
|description=CAGE_peak_7_at_NFATC2_5end | |||
|id=chr20:50179425..50179434,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000136;4.51e-12;13!CL:0002363;1.57e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.55e-10,15;CL:0002363,1.86e-09,2;CL:0000008,1.86e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0008801;1.03e-17;1!CL:0000008;1.57e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;9.87e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,8.69e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.49e-20!115;UBERON:0003075!2.21e-13!86;UBERON:0007284!2.21e-13!86;UBERON:0001049!2.72e-13!57;UBERON:0005068!2.72e-13!57;UBERON:0006241!2.72e-13!57;UBERON:0007135!2.72e-13!57;UBERON:0002346!2.33e-12!90;UBERON:0001017!6.62e-12!82;UBERON:0005743!8.47e-12!86;UBERON:0000073!1.32e-10!94;UBERON:0001016!1.32e-10!94;UBERON:0002616!2.56e-10!59;UBERON:0003076!6.22e-10!15;UBERON:0003057!6.22e-10!15;UBERON:0000955!3.26e-09!69;UBERON:0006238!3.26e-09!69;UBERON:0004733!2.44e-08!12;UBERON:0002028!2.44e-08!12;UBERON:0007277!2.44e-08!12;UBERON:0002020!1.05e-07!34;UBERON:0003528!1.05e-07!34;UBERON:0004732!1.46e-07!13;UBERON:0004121!1.60e-07!169;UBERON:0002298!1.78e-07!8;UBERON:0000924!4.16e-07!173;UBERON:0006601!4.16e-07!173;UBERON:0002791!6.41e-07!33;UBERON:0002780!9.03e-07!41;UBERON:0001890!9.03e-07!41;UBERON:0006240!9.03e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0001831;1.03e-17;1!UBERON:0001567;1.03e-17;1!UBERON:0002298;3.64e-12;6!UBERON:0002148;9.87e-10;2!UBERON:0006331;9.87e-10;2!UBERON:0009662;9.87e-10;2!UBERON:0001829;1.57e-09;2!UBERON:0003566;1.57e-09;2!UBERON:0001777;1.57e-09;2!UBERON:0004089;1.57e-09;2!UBERON:0001456;1.23e-07;21!UBERON:0000988;6.69e-07;3!UBERON:0001896;6.69e-07;3!UBERON:0005290;6.69e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001831,1.22e-17,1;UBERON:0001567,1.22e-17,1;UBERON:0008801,1.22e-17,1;UBERON:0002298,4.07e-12,6;UBERON:0002148,1.12e-09,2;UBERON:0006331,1.12e-09,2;UBERON:0009662,1.12e-09,2;UBERON:0001829,1.71e-09,2;UBERON:0004089,1.71e-09,2;UBERON:0003566,1.86e-09,2;UBERON:0001777,1.86e-09,2;UBERON:0001456,2.69e-07,22;UBERON:0001896,6.88e-07,3;UBERON:0005290,6.88e-07,3;UBERON:0010096,6.88e-07,3;UBERON:0000988,7.28e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.973269740605272,0,0,0.175669571386252,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0.213557388818567,0,0.300091096084402,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288239906833923,0.12624243342638,0,0.381988425558278,0,0,0.205654985406647,0,3.14409075893636,0,0,0,0.258543431515556,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0.508189248444927,0,0.773288812777695,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,1.13733384070897,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92495971052672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0.284136146806413,0,0,0,0,0,0.222617410045812,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0.331737779793674,0.295547618953547,0.438770794307945,0.10893846351899,0,0.384751292518985,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.337005664903385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.34945333648406,0.343972064943233,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0.558564802544508,0.229160424011684,0,0,0.429226048136571,0,0.0671834724867263,0.360299883542404,0,0,0,0,0.0984274815147488,0,0,0.272406812223151,0,0.137539436597234,0,0,0,0.182248669974074,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0.25426853765475,0,0,0,1.19730191562487,0,0,0.226624183040251,0,0,2.19781025814636,0.13223260174269,0,0,0.106787412567695,0.471612915298998,0,0,0,0,0,2.72008901684737,1.0027595760908,1.22538230705385,0.655745261419609,0,0.886068179966986,0.366078794705889,0.500763722825999,2.29363678276028,0.665574309221114,0.620964029413834,0,0,2.88133323329131,0,0,0,0,0,0,0,0,0,0,0,0.302461847526478,0.15543720058278,0,0.159296767163702,0,0.310525913752519,0,0,0.521745061811734,0.450772826991655,0,0,0,0,0.928067519756987,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0.194860308839388,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.638535436228605,0.82046545696302,0,0.207471757392654,0.161475645631851,0,0,0,0,0,0,0,0.198916222116275,0.225630985047772,0,0,0,0,0.147856086217045,0,0,0,0,0,1.09651553371436,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0.157115589916002,0,0.913158720509496,0,0,0.142953088353313,0,0.116241425368125,0,0,0,0,0,0,0.118332000730565,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.231522474323834,0,0,0.245148321753905,0,0.196308467114945,0,0.8453114551668,0,0,0.0644578879735772,0,0,0,0,0.730336388246517,0,0.143339583151451,0.157771562193185,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0.829169439458779,0.20686599172379,0,0.23806443146374,0,0,0.112131862580613,0,0.404234377916439,0.217716747896961,0,0,0,0.332660356546013,0.0814032686109745,0,0,0,0,0.244482888365733,0,0,0,0 | |||
|short_description=p7@NFATC2 | |||
}} |
Revision as of 09:08, 12 September 2013
Short description: | p7@NFATC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_NFATC2_5end |
Coexpression cluster: | NA |
Association with transcript: | -86bp_to_ENST00000371567_5end |
EntrezGene: | NFATC2 |
HGNC: | 7776 |
UniProt: | F8W8G4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.55e-10 | 15 |
keratocyte | 1.86e-09 | 2 |
migratory cranial neural crest cell | 1.86e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
parotid gland | 1.22e-17 | 1 |
cheek | 1.22e-17 | 1 |
parotid gland primordium | 1.22e-17 | 1 |
brainstem | 4.07e-12 | 6 |
locus ceruleus | 1.12e-09 | 2 |
brainstem nucleus | 1.12e-09 | 2 |
hindbrain nucleus | 1.12e-09 | 2 |
major salivary gland | 1.71e-09 | 2 |
midface | 1.71e-09 | 2 |
head connective tissue | 1.86e-09 | 2 |
substantia propria of cornea | 1.86e-09 | 2 |
face | 2.69e-07 | 22 |
medulla oblongata | 6.88e-07 | 3 |
myelencephalon | 6.88e-07 | 3 |
future myelencephalon | 6.88e-07 | 3 |
pons | 7.28e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
melanoma | 8.69e-10 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.