FFCP PHASE1:Hg19::chr20:48807587..48807603,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1051|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1834|TSSclassifier=W|UniProt=|association_with_transcript=211bp_to_uc002xvh.2_5end|coexpression_cluster_id=C107|description=CAGE_peak_16_at_CEBPB_5end|id=chr20:48807587..48807603,+|ontology_enrichment_celltype=CL:0000766!1.07e-26!76;CL:0002057!1.66e-25!42;CL:0000860!2.86e-24!45;CL:0002194!1.36e-21!63;CL:0000576!1.36e-21!63;CL:0000040!1.36e-21!63;CL:0000559!1.36e-21!63;CL:0000839!5.56e-21!70;CL:0002009!5.22e-20!65;CL:0000557!1.36e-19!71;CL:0000763!1.10e-09!112;CL:0000049!1.10e-09!112|ontology_enrichment_celltype_v019=CL:0000860;6.46e-45;33!CL:0002057;6.46e-45;33!CL:0000473;1.04e-36;39!CL:0000234;1.04e-36;39!CL:0000576;9.47e-28;48!CL:0000766;5.41e-21;69!CL:0000094;1.41e-10;8!CL:0000763;8.26e-10;100!CL:0000081;2.71e-07;11!CL:0000775;6.85e-07;3!CL:0002087;8.13e-07;104|ontology_enrichment_celltype_v019_2=CL:0000860,8.23e-50,42;CL:0002057,8.23e-50,42;CL:0000473,2.77e-49,48;CL:0000234,2.77e-49,48;CL:0000766,1.41e-43,72;CL:0002194,1.15e-38,59;CL:0000576,1.15e-38,59;CL:0000040,1.15e-38,59;CL:0000559,1.15e-38,59;CL:0002009,5.82e-37,61;CL:0000839,3.71e-33,66;CL:0000557,1.83e-32,67;CL:0000763,6.54e-24,108;CL:0000049,6.54e-24,108;CL:0000738,1.15e-18,136;CL:0002087,2.62e-16,115;CL:0002031,1.32e-12,120;CL:0000037,2.47e-12,168;CL:0002032,2.11e-11,161;CL:0000837,2.11e-11,161;CL:0000988,5.26e-11,177;CL:0000094,6.47e-11,8;CL:0000134,2.18e-10,354;CL:0002320,2.96e-10,361;CL:0000219,3.78e-08,386;CL:0000048,5.99e-08,427;CL:0000723,1.49e-07,433;CL:0000081,1.59e-07,11;CL:0000034,4.79e-07,441;CL:0000775,7.20e-07,3|ontology_enrichment_development_v019=CL:0002057;5.59e-35;42!CL:0000049;1.23e-08;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!2.38e-17!80;UBERON:0002390!1.31e-16!102;UBERON:0003061!1.31e-16!102;UBERON:0001474!2.72e-16!86;UBERON:0004765!9.29e-16!101;UBERON:0001434!9.29e-16!101;UBERON:0002193!1.86e-14!112;UBERON:0000926!8.00e-13!448;UBERON:0004120!8.00e-13!448;UBERON:0006603!8.00e-13!448;UBERON:0002405!9.18e-13!115;UBERON:0002204!9.69e-11!167;UBERON:0000468!2.56e-07!659|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.59e-27,76;UBERON:0002390,1.26e-26,98;UBERON:0003061,1.26e-26,98;UBERON:0001474,1.63e-25,82;UBERON:0004765,2.96e-23,90;UBERON:0002193,8.61e-23,108;UBERON:0001434,9.27e-22,100;UBERON:0002405,7.15e-21,93;UBERON:0002204,4.41e-13,167;UBERON:0003081,4.23e-12,203;UBERON:0002384,5.97e-10,371;UBERON:0000926,1.53e-09,315;UBERON:0004120,1.53e-09,315;UBERON:0006603,1.53e-09,315|phase1_expression=1.63510541343501,1.92690471501885,0.704772020479856,4.00293193412522,1.34088328328186,0,0,0,0.783556884599516,0.245733936501509,2.09340350391728,0,0.263766978228454,1.11389717664042,0.662794751455832,1.34465029290355,0,0,0.487932798790507,0.123121058076788,0,0,0.286235987131057,0,0,0,0.0821005894499457,0,1.96682138424452,0.767658796194425,1.54816123316076,0,0,1.84877005083394,0.0774672005803016,0,0,0,1.00272223735071,0.868043482863407,1.56740831967947,0.32389366601898,0.77272670290256,3.05336301437086,1.51150377475524,1.94067248950253,3.71886459049095,4.93401465626191,4.95530193432166,5.75384784644301,2.81776777182011,4.25668013799453,6.89491361473237,3.22742341791913,4.06279459783025,8.47090527941721,3.82068610080984,2.47195832889593,5.81559395504715,7.38136762275015,4.47535988059329,4.61791820261403,2.99195486432448,2.55734850319616,6.38460324982885,3.40431134814684,2.4912889959823,4.27122730936464,5.21482918420201,5.64690996233303,4.23779651843358,4.41933163185078,2.53169909952708,3.16882929467913,1.4882300997553,0.628975936525128,1.79725809834392,1.35159203557356,0.803627933485401,1.14005097496499,3.18266683518544,0.91332076882317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,1.94826728407911,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0.383220493601921,0,0.253019692019503,0,0,0,0,0,0,0,0,0.201606743224732,0.534880391567015,0.144824403882799,0,1.34140171940727,0,0.722878304769133,1.50401373190767,0.724232594804119,0,2.91980922181582,0.0945348171640679,0.443458794925128,0.175669571386252,0.130979075497713,0,0.370784442784429,0,0.348259474598534,0.797747763113191,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488124115096339,0,0,0,0,0,0,0,0,6.58902087180316,3.87780264148325,0.436094052142534,0,0.759783069987479,0.132409180813219,0.286836620748814,0,0,0,0,0.311211035399766,0.134710672069688,0.326923806226917,0,0,0.468642863667593,1.87296046098192,0,0.896692083310806,0.117434498643765,0.161872944368132,0.140450806702248,0.204154171254893,0.368502951935304,0.929932030581889,2.37600571456411,2.22540236350701,0,0.718618141816238,0.336672227908132,0.250237039743928,0.277064115484183,0,1.22595118319608,0.901428353439581,0.567160915800105,0.179389635688862,0.213557388818567,0,0,0,0.772921620136887,0.18611685633159,0,0,0.252433774244115,0.0920498986422993,0.3232921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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1051 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1834 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=211bp_to_uc002xvh.2_5end | |||
|coexpression_cluster_id=C107 | |||
|description=CAGE_peak_16_at_CEBPB_5end | |||
|id=chr20:48807587..48807603,+ | |||
|ontology_enrichment_celltype=CL:0000766!1.07e-26!76;CL:0002057!1.66e-25!42;CL:0000860!2.86e-24!45;CL:0002194!1.36e-21!63;CL:0000576!1.36e-21!63;CL:0000040!1.36e-21!63;CL:0000559!1.36e-21!63;CL:0000839!5.56e-21!70;CL:0002009!5.22e-20!65;CL:0000557!1.36e-19!71;CL:0000763!1.10e-09!112;CL:0000049!1.10e-09!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.46e-45;33!CL:0002057;6.46e-45;33!CL:0000473;1.04e-36;39!CL:0000234;1.04e-36;39!CL:0000576;9.47e-28;48!CL:0000766;5.41e-21;69!CL:0000094;1.41e-10;8!CL:0000763;8.26e-10;100!CL:0000081;2.71e-07;11!CL:0000775;6.85e-07;3!CL:0002087;8.13e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.23e-50,42;CL:0002057,8.23e-50,42;CL:0000473,2.77e-49,48;CL:0000234,2.77e-49,48;CL:0000766,1.41e-43,72;CL:0002194,1.15e-38,59;CL:0000576,1.15e-38,59;CL:0000040,1.15e-38,59;CL:0000559,1.15e-38,59;CL:0002009,5.82e-37,61;CL:0000839,3.71e-33,66;CL:0000557,1.83e-32,67;CL:0000763,6.54e-24,108;CL:0000049,6.54e-24,108;CL:0000738,1.15e-18,136;CL:0002087,2.62e-16,115;CL:0002031,1.32e-12,120;CL:0000037,2.47e-12,168;CL:0002032,2.11e-11,161;CL:0000837,2.11e-11,161;CL:0000988,5.26e-11,177;CL:0000094,6.47e-11,8;CL:0000134,2.18e-10,354;CL:0002320,2.96e-10,361;CL:0000219,3.78e-08,386;CL:0000048,5.99e-08,427;CL:0000723,1.49e-07,433;CL:0000081,1.59e-07,11;CL:0000034,4.79e-07,441;CL:0000775,7.20e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;5.59e-35;42!CL:0000049;1.23e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.38e-17!80;UBERON:0002390!1.31e-16!102;UBERON:0003061!1.31e-16!102;UBERON:0001474!2.72e-16!86;UBERON:0004765!9.29e-16!101;UBERON:0001434!9.29e-16!101;UBERON:0002193!1.86e-14!112;UBERON:0000926!8.00e-13!448;UBERON:0004120!8.00e-13!448;UBERON:0006603!8.00e-13!448;UBERON:0002405!9.18e-13!115;UBERON:0002204!9.69e-11!167;UBERON:0000468!2.56e-07!659 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.59e-27,76;UBERON:0002390,1.26e-26,98;UBERON:0003061,1.26e-26,98;UBERON:0001474,1.63e-25,82;UBERON:0004765,2.96e-23,90;UBERON:0002193,8.61e-23,108;UBERON:0001434,9.27e-22,100;UBERON:0002405,7.15e-21,93;UBERON:0002204,4.41e-13,167;UBERON:0003081,4.23e-12,203;UBERON:0002384,5.97e-10,371;UBERON:0000926,1.53e-09,315;UBERON:0004120,1.53e-09,315;UBERON:0006603,1.53e-09,315 | |||
|phase1_expression=1.63510541343501,1.92690471501885,0.704772020479856,4.00293193412522,1.34088328328186,0,0,0,0.783556884599516,0.245733936501509,2.09340350391728,0,0.263766978228454,1.11389717664042,0.662794751455832,1.34465029290355,0,0,0.487932798790507,0.123121058076788,0,0,0.286235987131057,0,0,0,0.0821005894499457,0,1.96682138424452,0.767658796194425,1.54816123316076,0,0,1.84877005083394,0.0774672005803016,0,0,0,1.00272223735071,0.868043482863407,1.56740831967947,0.32389366601898,0.77272670290256,3.05336301437086,1.51150377475524,1.94067248950253,3.71886459049095,4.93401465626191,4.95530193432166,5.75384784644301,2.81776777182011,4.25668013799453,6.89491361473237,3.22742341791913,4.06279459783025,8.47090527941721,3.82068610080984,2.47195832889593,5.81559395504715,7.38136762275015,4.47535988059329,4.61791820261403,2.99195486432448,2.55734850319616,6.38460324982885,3.40431134814684,2.4912889959823,4.27122730936464,5.21482918420201,5.64690996233303,4.23779651843358,4.41933163185078,2.53169909952708,3.16882929467913,1.4882300997553,0.628975936525128,1.79725809834392,1.35159203557356,0.803627933485401,1.14005097496499,3.18266683518544,0.91332076882317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,1.94826728407911,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0.383220493601921,0,0.253019692019503,0,0,0,0,0,0,0,0,0.201606743224732,0.534880391567015,0.144824403882799,0,1.34140171940727,0,0.722878304769133,1.50401373190767,0.724232594804119,0,2.91980922181582,0.0945348171640679,0.443458794925128,0.175669571386252,0.130979075497713,0,0.370784442784429,0,0.348259474598534,0.797747763113191,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488124115096339,0,0,0,0,0,0,0,0,6.58902087180316,3.87780264148325,0.436094052142534,0,0.759783069987479,0.132409180813219,0.286836620748814,0,0,0,0,0.311211035399766,0.134710672069688,0.326923806226917,0,0,0.468642863667593,1.87296046098192,0,0.896692083310806,0.117434498643765,0.161872944368132,0.140450806702248,0.204154171254893,0.368502951935304,0.929932030581889,2.37600571456411,2.22540236350701,0,0.718618141816238,0.336672227908132,0.250237039743928,0.277064115484183,0,1.22595118319608,0.901428353439581,0.567160915800105,0.179389635688862,0.213557388818567,0,0,0,0.772921620136887,0.18611685633159,0,0,0.252433774244115,0.0920498986422993,0.323292113637624,0,0,0,0.193260853163297,0.272746120590835,0,0.243947412259191,0.265059536642971,0.116193942869518,0,0.504641701751257,0.36497735907583,0,0,2.76269842704961,2.3218396401599,0,0.118306800039844,0,0.241011029883482,0.220587945464788,0.217879444092406,0,0.134831308160164,0,0,0,0,0,0,0,0,2.95394953340702,0,0.491953754172454,0,0.439001141634502,0,0.603173834469785,0.370353780634118,0,0,0,0,0.234817388471643,0.433099343283221,0.462985512576611,0.380508304469197,0,0,1.23108503043699,1.63802985597466,1.48631162288728,0,0.16798212819886,0,0.0895585227028483,0,0,0.492663237895943,0,0.829312462163088,0.576479813667846,0.88369703398466,0,0.381988425558278,1.17217447210047,0,0,0.300343057843917,0,0.224262168690721,0,0.22001485746285,0,0,0.845302752556,0.26593811658487,0,0.514414748524284,0,0.532844358032199,0.285955987316295,0.542621605391443,0,1.30294473717494,1.06617584622764,2.37585561880029,0.301439377059586,0,0.99972991182057,0,0.502257091432126,0,0,0,0,0.434343920002738,1.02738161275192,0,0.224170287987055,0,0,0.256686072559497,0,0,0,0,0.637938751653163,12.7331194071021,17.9496875522415,6.21623270154053,0.49076596687656,0.500170521059677,0.542530047399471,1.03985430765404,1.07057393278297,0.630809660135739,0.702848489956279,0.601892199455438,0,0,0,0,0.521301686808497,0.391602314925481,0,1.03384013061444,2.37285620900479,1.06727557803444,0.303127571446259,0,1.20956117331872,0.248107807818777,0.153461973288062,1.40330047216537,0.896974044789907,0,0.64341568457443,1.48418066444991,0.616838775210622,0.710246901252508,0.246381468041427,0,0.232420756919918,0.604297247958111,0.40101294060657,0.736647911487171,1.14814448164607,0.182091168006717,1.44236856455367,0,0.0770153371044148,0.784349769176855,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0.261435451024901,0,0,0.325378394664303,1.95777922130672,0.183138929636687,0,0,0,0,0.676695028044854,0.462145851343933,1.22802939780904,0.689182862422653,0.859361958946189,0.435050081742686,0.426133137080504,0.178064071293475,0.661139661443912,0.384380134730212,0,0.6069466851333,0.464845549297286,0,0,0.308033580176089,0,0,0,0,0.372158369359667,0,0.38126038784765,0,0.42793898803392,0,0,0.359744915166629,0.823611089208164,0.471249609382746,0.202182481573316,1.58510321173008,0,0,0.243713489631284,0,0.272999822815972,0.848432591722276,1.13008116620243,0,0,0,0,0.655894752046633,0,0,0,0.143411352204052,0.196498082026242,0,0.709522128141196,1.05553817648832,0.987884678879706,0,1.04980416073495,0.192444225451024,0,2.17781969722645,1.88287601553558,0.86101074534246,0,0.443430153536676,0,0,0,2.27858874869665,0.238231775457789,0,0,0.540031437238115,1.58625035258854,0.106824071127473,0,0.7351206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| |||
|short_description=p16@CEBPB | |||
}} |
Revision as of 09:02, 12 September 2013
Short description: | p16@CEBPB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_16_at_CEBPB_5end |
Coexpression cluster: | C107_Neutrophils_CD14_Eosinophils_Monocytederived_Whole_Peripheral_blood |
Association with transcript: | 211bp_to_uc002xvh.2_5end |
EntrezGene: | CEBPB |
HGNC: | 1834 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.23e-50 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.23e-50 | 42 |
defensive cell | 2.77e-49 | 48 |
phagocyte | 2.77e-49 | 48 |
myeloid leukocyte | 1.41e-43 | 72 |
monopoietic cell | 1.15e-38 | 59 |
monocyte | 1.15e-38 | 59 |
monoblast | 1.15e-38 | 59 |
promonocyte | 1.15e-38 | 59 |
macrophage dendritic cell progenitor | 5.82e-37 | 61 |
myeloid lineage restricted progenitor cell | 3.71e-33 | 66 |
granulocyte monocyte progenitor cell | 1.83e-32 | 67 |
myeloid cell | 6.54e-24 | 108 |
common myeloid progenitor | 6.54e-24 | 108 |
leukocyte | 1.15e-18 | 136 |
nongranular leukocyte | 2.62e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 1.32e-12 | 120 |
hematopoietic stem cell | 2.47e-12 | 168 |
hematopoietic oligopotent progenitor cell | 2.11e-11 | 161 |
hematopoietic multipotent progenitor cell | 2.11e-11 | 161 |
hematopoietic cell | 5.26e-11 | 177 |
granulocyte | 6.47e-11 | 8 |
mesenchymal cell | 2.18e-10 | 354 |
connective tissue cell | 2.96e-10 | 361 |
motile cell | 3.78e-08 | 386 |
multi fate stem cell | 5.99e-08 | 427 |
somatic stem cell | 1.49e-07 | 433 |
blood cell | 1.59e-07 | 11 |
stem cell | 4.79e-07 | 441 |
neutrophil | 7.20e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.59e-27 | 76 |
hematopoietic system | 1.26e-26 | 98 |
blood island | 1.26e-26 | 98 |
bone element | 1.63e-25 | 82 |
skeletal element | 2.96e-23 | 90 |
hemolymphoid system | 8.61e-23 | 108 |
skeletal system | 9.27e-22 | 100 |
immune system | 7.15e-21 | 93 |
musculoskeletal system | 4.41e-13 | 167 |
lateral plate mesoderm | 4.23e-12 | 203 |
connective tissue | 5.97e-10 | 371 |
mesoderm | 1.53e-09 | 315 |
mesoderm-derived structure | 1.53e-09 | 315 |
presumptive mesoderm | 1.53e-09 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.