FFCP PHASE1:Hg19::chr20:34459375..34459393,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr20:34459375..34459393,+|id=chr20:34459375..34459393,+|ontology_enrichment_celltype=CL:0000057!8.18e-08!75;CL:0000077!4.61e-07!19;CL:0000055!8.62e-07!180|ontology_enrichment_celltype_v019=CL:0000306;1.96e-08;4!CL:0002222;1.96e-08;4!CL:0002224;1.96e-08;4!CL:0000077;2.10e-08;19!CL:0002097;3.03e-08;2|ontology_enrichment_celltype_v019_2=CL:0000077,1.67e-08,19;CL:0000306,2.58e-08,4;CL:0002222,2.58e-08,4;CL:0002224,2.58e-08,4;CL:0002097,3.10e-08,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:162,5.51e-07,235;DOID:0050687,9.79e-07,143|ontology_enrichment_uberon=UBERON:0001737!5.03e-11!9|ontology_enrichment_uberon_v019=UBERON:0001737;2.47e-18;9!UBERON:0001557;2.47e-18;9!UBERON:0010077;1.96e-08;4!UBERON:0005389;1.96e-08;4!UBERON:0000484;1.96e-08;4!UBERON:0000965;1.96e-08;4!UBERON:0001803;1.96e-08;4|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.99e-18,9;UBERON:0010077,2.58e-08,4;UBERON:0005389,2.58e-08,4;UBERON:0000484,2.58e-08,4;UBERON:0002546,2.58e-08,4;UBERON:0000965,2.58e-08,4;UBERON:0001803,2.58e-08,4;UBERON:0003073,2.58e-08,4;UBERON:0005426,2.58e-08,4;UBERON:0001557,3.41e-08,19|phase1_expression=0.363356758541113,0,0,0,0,0.872338524100369,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434539556882471,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.17859945656816,0,0,0,0,0,0,0,0,0.496971951695318,0.25326102332916,0.132409180813219,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0.408308342509787,0.368502951935304,0.516628905878827,2.37600571456411,1.7308685049499,0,0,0.168336113954066,0,1.38532057742091,0,2.45190236639216,2.40380894250555,0.113432183160021,0,0,0.211931901159562,0.600182192168805,0.206105058476878,0.515281080091258,0,0.168776332241266,0.194874010322397,0,0.0920498986422993,0.161646056818812,0,0,0.169560592310488,0,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,1.28648187638577,0,0,0,2.12952240071719,2.36018566109342,0.723033089650446,1.98529150918309,2.61455332910887,1.18635309555548,0.539325232640658,1.17732879075208,1.92373578473195,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0.301586917234893,0.185176890317059,0,0,1.44331342025273,0,1.05667824812239,0.577465791044295,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0.503946384596579,0.425325291727159,0.895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0.112131084345361,0.43596006883328,0.36669142910475,0.129271715757778,0,0,0,0,0,1.41849132023278,0,0.57191197463259,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.289562613335158,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,1.87173775377726,1.07057393278297,1.26161932027148,0.937131319941706,0,0,0,0,0.184369168541703,0.0868836144680828,0,0.343143423810856,0,0,0,0,0,0,1.24053903909388,0.306923946576125,0.561320188866147,0,1.02341449813341,0.160853921143607,0,0,0,0.410635780069046,1.03850885836724,0.232420756919918,0,0,0,0.803701137152247,0.182091168006717,0.524497659837696,0,0,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0.574265537996172,0,1.6068392984416,0.096670718292122,0,0,0,0,0,0,0,0,0.192190067365106,0,0,0,0,0,0.308033580176089,0,0,0.55597265731176,1.28812398067792,0,0.316379424718726,0.190630193923825,0,0,0.636406495851874,0.78494864019923,0,0.274537029736055,0,0.202182481573316,0,0,0.48763373908959,1.21856744815642,0,0,0.282810863907425,0,0,0,0.438450885253763,0,0,1.01455188481352,0,0.281695602532241,0,0,0.35667105148125,0,0.211107635297664,0,0,0.349934720244983,0.577332676353072,0,0,0,0.43050537267123,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23087398947712,0,0,0,0,0,0,0,0,0.47748896947538,0,0,0,0,0,0,0,0,0,0,0.409074730008619,0,0.622079175323615,0.0898683511473268,0,0,0,0,8.89095921157095,0,0,0,0,0.262379999988587,0,0.1137934482855,0,0.709163045303809,0,0,0.347249989866585,0,0,0,0,0,0,1.52513848926586,0.139423744278603,0,0,0,0.179515288819544,0,0.638002319463839,4.67147726349498,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0.103688191397247,0.664653872707185,0,0.313932918407225,0,0,0,0,0.0979923974143777,0,0,2.75177651954586,2.6124209448053,2.0465008784132,2.6276946257027,0,0,0,0.822251547880505,0,0.0633107959558787,0,0,0,0,0,0,0,0.14405479798815,0,0.235694034616795,1.49494626680975,2.09205692624666,1.93796613509011,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0.0671834724867263,0.720599767084807,0,0,0,0,0.393709926058995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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr20:34459375..34459393,+ | |||
|id=chr20:34459375..34459393,+ | |||
|ontology_enrichment_celltype=CL:0000057!8.18e-08!75;CL:0000077!4.61e-07!19;CL:0000055!8.62e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0000306;1.96e-08;4!CL:0002222;1.96e-08;4!CL:0002224;1.96e-08;4!CL:0000077;2.10e-08;19!CL:0002097;3.03e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,1.67e-08,19;CL:0000306,2.58e-08,4;CL:0002222,2.58e-08,4;CL:0002224,2.58e-08,4;CL:0002097,3.10e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,5.51e-07,235;DOID:0050687,9.79e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0001737!5.03e-11!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.47e-18;9!UBERON:0001557;2.47e-18;9!UBERON:0010077;1.96e-08;4!UBERON:0005389;1.96e-08;4!UBERON:0000484;1.96e-08;4!UBERON:0000965;1.96e-08;4!UBERON:0001803;1.96e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.99e-18,9;UBERON:0010077,2.58e-08,4;UBERON:0005389,2.58e-08,4;UBERON:0000484,2.58e-08,4;UBERON:0002546,2.58e-08,4;UBERON:0000965,2.58e-08,4;UBERON:0001803,2.58e-08,4;UBERON:0003073,2.58e-08,4;UBERON:0005426,2.58e-08,4;UBERON:0001557,3.41e-08,19 | |||
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|short_description=p@chr20:34459375..34459393,+ | |||
}} |
Revision as of 08:15, 12 September 2013
Short description: | p@chr20:34459375..34459393, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr20:34459375..34459393, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 1.67e-08 | 19 |
crystallin accumulating cell | 2.58e-08 | 4 |
vertebrate lens cell | 2.58e-08 | 4 |
lens epithelial cell | 2.58e-08 | 4 |
cortical cell of adrenal gland | 3.10e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.99e-18 | 9 |
cuboidal epithelium | 2.58e-08 | 4 |
transparent eye structure | 2.58e-08 | 4 |
simple cuboidal epithelium | 2.58e-08 | 4 |
cranial placode | 2.58e-08 | 4 |
lens of camera-type eye | 2.58e-08 | 4 |
epithelium of lens | 2.58e-08 | 4 |
lens placode | 2.58e-08 | 4 |
lens vesicle | 2.58e-08 | 4 |
upper respiratory tract | 3.41e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
cancer | 5.51e-07 | 235 |
cell type cancer | 9.79e-07 | 143 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.