FFCP PHASE1:Hg19::chr20:25176603..25176614,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr20:25176603..25176614,+|id=chr20:25176603..25176614,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002363;1.33e-17;2!CL:0002032;1.15e-09;1!CL:0002550;1.15e-09;1!CL:0000557;1.15e-09;1|ontology_enrichment_celltype_v019_2=CL:0002363,1.59e-17,2;CL:0000008,1.59e-17,2;CL:0002550,6.31e-10,1|ontology_enrichment_development_v019=CL:0000008;1.33e-17;2!UBERON:0010227;1.15e-09;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3493;4.62e-18;2|ontology_enrichment_disease_v019_2=DOID:3493,8.08e-18,2|ontology_enrichment_uberon=UBERON:0000062!2.54e-08!511;UBERON:0003075!1.31e-07!86;UBERON:0007284!1.31e-07!86;UBERON:0000481!9.15e-07!347|ontology_enrichment_uberon_v019=UBERON:0003891;2.74e-19;4!UBERON:0000964;2.74e-19;4!UBERON:0010409;2.74e-19;4!UBERON:0003566;1.33e-17;2!UBERON:0001777;1.33e-17;2!UBERON:0001801;1.03e-09;14!UBERON:0002079;1.15e-09;1!UBERON:0010313;4.87e-08;10!UBERON:0000019;3.42e-07;19!UBERON:0000047;3.42e-07;19!UBERON:0004088;3.42e-07;19!UBERON:0010230;3.42e-07;19!UBERON:0000970;7.74e-07;20|ontology_enrichment_uberon_v019_2=UBERON:0000964,2.76e-19,4;UBERON:0010409,2.76e-19,4;UBERON:0004348,2.76e-19,4;UBERON:0005427,2.76e-19,4;UBERON:0003891,5.84e-19,4;UBERON:0003566,1.59e-17,2;UBERON:0001777,1.59e-17,2;UBERON:0001801,1.01e-09,14;UBERON:0002079,1.15e-09,1;UBERON:0010313,4.88e-08,10;UBERON:0002342,4.88e-08,10;UBERON:0005062,4.88e-08,10;UBERON:0000019,7.63e-07,20;UBERON:0000047,7.63e-07,20;UBERON:0010312,7.63e-07,20;UBERON:0004088,7.63e-07,20;UBERON:0010230,7.63e-07,20;UBERON:0003072,7.63e-07,20;UBERON:0004128,7.63e-07,20;UBERON:0003071,7.63e-07,20|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0.37129905888014,0,0,0,0,0,0,0.204000691244253,0.313454721478088,0,0.136874425072884,0,0.152826811495903,0.0821005894499457,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0.200544447470142,0,0,0,0.515151135268373,0.290796477559129,0.377875943688809,0.242584061187816,0,0,0.929119112685311,1.7261543539329,0.512321413058201,0.945928919554341,0,0,0,0,0.272906150057846,0.224723484445085,0,0,0,0,0,0,0,0,0,1.25624332628372,1.5644487552606,0.65156653411535,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0.205601498999509,0,0.651844533267181,0,0,0,0,0,0.270803863765016,0.128091319725675,0.130059347559878,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0.651083453856419,0,0,0,0,0,0,0.201606743224732,0,0.289648807765598,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0.0654895377488563,0.364295288292542,1.48313777113772,0.97364218096405,0.696518949197069,0.797747763113191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0.151357427644931,0,1.64025002283658,0.312160076830321,0,0.298897361103602,0,0.161872944368132,0,0,0,0.309977343527296,0,0,0.910161361938026,0,0,0.500474079487857,0,0.438977620880838,0,0.150238058906597,0,0.179389635688862,0,0.211931901159562,0,0.206105058476878,0,0,0.675105328965065,0,0,0,0,0,0.10075209822764,0,0.386521706326594,0.272746120590835,0,0,0.132529768321485,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0.674338760312407,0,0.441175890929576,0.217879444092406,0.474541238222193,0,0,0.38474715694639,0.738155454624648,0,0,0,0,0,0,0,0,0.171567810298526,0.329250856225877,0,0.100528972411631,0,1.62904152655162,1.03993478527958,1.44331342025273,0,0.352226082707465,0,0,0,0,0,0.738651018262192,0,0,0,0.16798212819886,0.283550194484773,0.268675568108545,0.290633938513962,0,0.985326475791887,0.088048434013226,0,0,0,0,0,0,1.71072446022705,0.308482478109971,1.8020583470635,0.285826432630578,0.224262168690721,0,0,0,3.57656445851882,0,0,0,0.514414748524284,0,1.5985330740966,0,0,0,0,0,0,0,0,0.099972991182057,0,0.502257091432126,0,0.239624855491583,0,0,0.434343920002738,0.205476322550383,0,0,0.197030760201927,0,0.256686072559497,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0.24538298343828,0,0.542530047399471,0,0.178428988797162,0,0,0,0,0,0,0.184369168541703,0,0.195801157462741,0,0,0,0.106727557803444,0.303127571446259,0,0,0.248107807818777,0,0,0,1.02341449813341,0.321707842287215,0,0.154209693802656,0,0,0,0,0.241718899183244,0,0.184161977871793,0,0.364182336013434,0.262248829918848,0,0,0.784349769176855,0,0.316654886678627,1.13733384070897,0.170093705276516,0,0,0,1.00337954770971,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0.574265537996172,0,0,0.290012154876366,0.154048617114644,0,0,0.322260734604821,0.145016693914229,0.0852266274161009,0.178064071293475,0.165284915360978,0,0.255225424989168,0.10115778085555,0.464845549297286,0.31481234683064,0,0.616067160352178,1.06461206063404,0,0,0.143124886741991,0,0,0,0.255897791311334,0,0,0,0,0,0,0.808729926293264,0,0,0.48763373908959,0.731140468893853,0,0.136499911407986,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr20:25176603..25176614,+ | |||
|id=chr20:25176603..25176614,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002363;1.33e-17;2!CL:0002032;1.15e-09;1!CL:0002550;1.15e-09;1!CL:0000557;1.15e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002363,1.59e-17,2;CL:0000008,1.59e-17,2;CL:0002550,6.31e-10,1 | |||
|ontology_enrichment_development_v019=CL:0000008;1.33e-17;2!UBERON:0010227;1.15e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3493;4.62e-18;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,8.08e-18,2 | |||
|ontology_enrichment_uberon=UBERON:0000062!2.54e-08!511;UBERON:0003075!1.31e-07!86;UBERON:0007284!1.31e-07!86;UBERON:0000481!9.15e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0003891;2.74e-19;4!UBERON:0000964;2.74e-19;4!UBERON:0010409;2.74e-19;4!UBERON:0003566;1.33e-17;2!UBERON:0001777;1.33e-17;2!UBERON:0001801;1.03e-09;14!UBERON:0002079;1.15e-09;1!UBERON:0010313;4.87e-08;10!UBERON:0000019;3.42e-07;19!UBERON:0000047;3.42e-07;19!UBERON:0004088;3.42e-07;19!UBERON:0010230;3.42e-07;19!UBERON:0000970;7.74e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000964,2.76e-19,4;UBERON:0010409,2.76e-19,4;UBERON:0004348,2.76e-19,4;UBERON:0005427,2.76e-19,4;UBERON:0003891,5.84e-19,4;UBERON:0003566,1.59e-17,2;UBERON:0001777,1.59e-17,2;UBERON:0001801,1.01e-09,14;UBERON:0002079,1.15e-09,1;UBERON:0010313,4.88e-08,10;UBERON:0002342,4.88e-08,10;UBERON:0005062,4.88e-08,10;UBERON:0000019,7.63e-07,20;UBERON:0000047,7.63e-07,20;UBERON:0010312,7.63e-07,20;UBERON:0004088,7.63e-07,20;UBERON:0010230,7.63e-07,20;UBERON:0003072,7.63e-07,20;UBERON:0004128,7.63e-07,20;UBERON:0003071,7.63e-07,20 | |||
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| |||
|short_description=p@chr20:25176603..25176614,+ | |||
}} |
Revision as of 07:53, 12 September 2013
Short description: | p@chr20:25176603..25176614, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr20:25176603..25176614, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
keratocyte | 1.59e-17 | 2 |
migratory cranial neural crest cell | 1.59e-17 | 2 |
fibroblast of the conjuctiva | 6.31e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
cornea | 2.76e-19 | 4 |
eye surface | 2.76e-19 | 4 |
optic eminence | 2.76e-19 | 4 |
corneal primordium | 2.76e-19 | 4 |
stroma | 5.84e-19 | 4 |
head connective tissue | 1.59e-17 | 2 |
substantia propria of cornea | 1.59e-17 | 2 |
anterior segment of eyeball | 1.01e-09 | 14 |
left cardiac atrium | 1.15e-09 | 1 |
neural crest-derived structure | 4.88e-08 | 10 |
neural crest | 4.88e-08 | 10 |
neural fold | 4.88e-08 | 10 |
camera-type eye | 7.63e-07 | 20 |
simple eye | 7.63e-07 | 20 |
immature eye | 7.63e-07 | 20 |
ocular region | 7.63e-07 | 20 |
eyeball of camera-type eye | 7.63e-07 | 20 |
optic cup | 7.63e-07 | 20 |
optic vesicle | 7.63e-07 | 20 |
eye primordium | 7.63e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 8.08e-18 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.