FFCP PHASE1:Hg19::chr20:22565646..22565665,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C4016|description=CAGE_peak_at_chr20:22565646..22565665,-|id=chr20:22565646..22565665,-|ontology_enrichment_celltype=CL:0000066!4.25e-15!254;CL:0000223!7.79e-12!59;CL:0002076!1.28e-09!43;CL:0000082!3.21e-08!19;CL:0002368!5.94e-08!13|ontology_enrichment_celltype_v019=CL:0000182;2.66e-11;12!CL:0002553;1.42e-09;1|ontology_enrichment_celltype_v019_2=CL:0000182,2.33e-11,12;CL:0002553,1.15e-09,1|ontology_enrichment_development_v019=UBERON:0001041;9.51e-13;30!UBERON:0004161;2.60e-12;11!UBERON:0009497;1.91e-10;13|ontology_enrichment_disease=DOID:305!2.14e-19!106;DOID:0050687!1.09e-15!143;DOID:162!2.82e-12!235;DOID:14566!9.41e-12!239;DOID:0050615!3.06e-08!16;DOID:3119!2.66e-07!14;DOID:1324!9.84e-07!15|ontology_enrichment_disease_v019=DOID:3371;4.26e-10;1!DOID:4549;4.26e-10;1!DOID:5861;4.26e-10;1!DOID:6496;4.26e-10;1!DOID:3347;6.04e-10;1!DOID:0050619;1.42e-09;1!DOID:1357;1.42e-09;1!DOID:0050615;1.98e-08;16|ontology_enrichment_disease_v019_2=DOID:3371,4.46e-10,1;DOID:4549,4.46e-10,1;DOID:5861,4.46e-10,1;DOID:6496,4.46e-10,1;DOID:3347,5.31e-10,1;DOID:0050619,8.91e-10,1;DOID:1357,8.91e-10,1;DOID:0050615,1.66e-08,16;DOID:305,9.27e-08,106|ontology_enrichment_uberon=UBERON:0001007!3.68e-18!155;UBERON:0001555!3.68e-18!155;UBERON:0007026!3.68e-18!155;UBERON:0004119!8.66e-18!169;UBERON:0000925!8.66e-18!169;UBERON:0006595!8.66e-18!169;UBERON:0004921!4.54e-17!129;UBERON:0004185!4.54e-17!129;UBERON:0000077!8.54e-15!130;UBERON:0005911!3.14e-14!82;UBERON:0001041!7.10e-13!98;UBERON:0005177!3.37e-11!107;UBERON:0000466!7.55e-10!126;UBERON:0005153!1.18e-08!37;UBERON:0002048!1.87e-08!22;UBERON:0000117!1.87e-08!22;UBERON:0000171!1.87e-08!22;UBERON:0000170!1.87e-08!22;UBERON:0005597!1.87e-08!22;UBERON:0000118!1.87e-08!22;UBERON:0005178!2.55e-08!34;UBERON:0002224!2.55e-08!34;UBERON:0004802!3.21e-08!19;UBERON:0000115!3.21e-08!19;UBERON:0003929!4.09e-08!54;UBERON:0005181!5.36e-08!35;UBERON:0005409!1.10e-07!35;UBERON:0005157!2.14e-07!51;UBERON:0009497!2.53e-07!25;UBERON:0000015!2.53e-07!25;UBERON:0002423!2.53e-07!25;UBERON:0006235!2.53e-07!25;UBERON:0004161!2.53e-07!25;UBERON:0008947!3.90e-07!38;UBERON:0003258!3.90e-07!38;UBERON:0000065!4.95e-07!53;UBERON:0003104!6.25e-07!238;UBERON:0009142!6.25e-07!238;UBERON:0009569!6.85e-07!113|ontology_enrichment_uberon_v019=UBERON:0001764;1.42e-09;1!UBERON:0001825;1.42e-09;1!UBERON:0002107;3.43e-07;19!UBERON:0006925;3.43e-07;19|ontology_enrichment_uberon_v019_2=UBERON:0005177,8.86e-10,101;UBERON:0001764,8.91e-10,1;UBERON:0001825,8.91e-10,1;UBERON:0007499,3.80e-08,25;UBERON:0009856,7.95e-08,26;UBERON:0002107,3.16e-07,19;UBERON:0006925,3.16e-07,19;UBERON:0008836,3.16e-07,19|phase1_expression=0,0,0,0,0,0,0,0,0,0,1.39560233594486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09288586487763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860919069801795,0,0,0,0,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0.552485933615378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,1.00726411300178,0.495056999523528,0,0,0,0,0,0,0,0,0,0,0,0,0.960950336825531,0,1.11273558941105,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,1.08890984861323,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92495971052672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556543525114529,0,4.85588438694385,0,0,0.755798243562828,0,0,0,0.359473404589307,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0,1.01701460117107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.489698424477443,0.706765357169704,0,0.995261931078505,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414752765588989,2.65861549082874,0,0.313932918407225,1.19472429772959,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,4.76583084134101,0,0,0,0,0,0.0801588202515337,0.213452994739353,0,0.432271251462318,0.114536596165916,3.26030495937733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,1.6544468284517,1.64831716762333,2.08950985947973,0.393709926058995,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0.383830394638891,0,0,0,0,0,0,0,0.082092520749339,0,0,0.879313402068495,0,0,0,0.855434189421647,0,0.320362237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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C4016 | |||
|description=CAGE_peak_at_chr20:22565646..22565665,- | |||
|id=chr20:22565646..22565665,- | |||
|ontology_enrichment_celltype=CL:0000066!4.25e-15!254;CL:0000223!7.79e-12!59;CL:0002076!1.28e-09!43;CL:0000082!3.21e-08!19;CL:0002368!5.94e-08!13 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.66e-11;12!CL:0002553;1.42e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.33e-11,12;CL:0002553,1.15e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0001041;9.51e-13;30!UBERON:0004161;2.60e-12;11!UBERON:0009497;1.91e-10;13 | |||
|ontology_enrichment_disease=DOID:305!2.14e-19!106;DOID:0050687!1.09e-15!143;DOID:162!2.82e-12!235;DOID:14566!9.41e-12!239;DOID:0050615!3.06e-08!16;DOID:3119!2.66e-07!14;DOID:1324!9.84e-07!15 | |||
|ontology_enrichment_disease_v019=DOID:3371;4.26e-10;1!DOID:4549;4.26e-10;1!DOID:5861;4.26e-10;1!DOID:6496;4.26e-10;1!DOID:3347;6.04e-10;1!DOID:0050619;1.42e-09;1!DOID:1357;1.42e-09;1!DOID:0050615;1.98e-08;16 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,4.46e-10,1;DOID:4549,4.46e-10,1;DOID:5861,4.46e-10,1;DOID:6496,4.46e-10,1;DOID:3347,5.31e-10,1;DOID:0050619,8.91e-10,1;DOID:1357,8.91e-10,1;DOID:0050615,1.66e-08,16;DOID:305,9.27e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0001007!3.68e-18!155;UBERON:0001555!3.68e-18!155;UBERON:0007026!3.68e-18!155;UBERON:0004119!8.66e-18!169;UBERON:0000925!8.66e-18!169;UBERON:0006595!8.66e-18!169;UBERON:0004921!4.54e-17!129;UBERON:0004185!4.54e-17!129;UBERON:0000077!8.54e-15!130;UBERON:0005911!3.14e-14!82;UBERON:0001041!7.10e-13!98;UBERON:0005177!3.37e-11!107;UBERON:0000466!7.55e-10!126;UBERON:0005153!1.18e-08!37;UBERON:0002048!1.87e-08!22;UBERON:0000117!1.87e-08!22;UBERON:0000171!1.87e-08!22;UBERON:0000170!1.87e-08!22;UBERON:0005597!1.87e-08!22;UBERON:0000118!1.87e-08!22;UBERON:0005178!2.55e-08!34;UBERON:0002224!2.55e-08!34;UBERON:0004802!3.21e-08!19;UBERON:0000115!3.21e-08!19;UBERON:0003929!4.09e-08!54;UBERON:0005181!5.36e-08!35;UBERON:0005409!1.10e-07!35;UBERON:0005157!2.14e-07!51;UBERON:0009497!2.53e-07!25;UBERON:0000015!2.53e-07!25;UBERON:0002423!2.53e-07!25;UBERON:0006235!2.53e-07!25;UBERON:0004161!2.53e-07!25;UBERON:0008947!3.90e-07!38;UBERON:0003258!3.90e-07!38;UBERON:0000065!4.95e-07!53;UBERON:0003104!6.25e-07!238;UBERON:0009142!6.25e-07!238;UBERON:0009569!6.85e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0001764;1.42e-09;1!UBERON:0001825;1.42e-09;1!UBERON:0002107;3.43e-07;19!UBERON:0006925;3.43e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,8.86e-10,101;UBERON:0001764,8.91e-10,1;UBERON:0001825,8.91e-10,1;UBERON:0007499,3.80e-08,25;UBERON:0009856,7.95e-08,26;UBERON:0002107,3.16e-07,19;UBERON:0006925,3.16e-07,19;UBERON:0008836,3.16e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,1.39560233594486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09288586487763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860919069801795,0,0,0,0,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0.552485933615378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,1.00726411300178,0.495056999523528,0,0,0,0,0,0,0,0,0,0,0,0,0.960950336825531,0,1.11273558941105,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,1.08890984861323,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92495971052672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556543525114529,0,4.85588438694385,0,0,0.755798243562828,0,0,0,0.359473404589307,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0,1.01701460117107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.489698424477443,0.706765357169704,0,0.995261931078505,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414752765588989,2.65861549082874,0,0.313932918407225,1.19472429772959,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,4.76583084134101,0,0,0,0,0,0.0801588202515337,0.213452994739353,0,0.432271251462318,0.114536596165916,3.26030495937733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,1.6544468284517,1.64831716762333,2.08950985947973,0.393709926058995,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0.383830394638891,0,0,0,0,0,0,0,0.082092520749339,0,0,0.879313402068495,0,0,0,0.855434189421647,0,0.320362237703084,0,0,0,0,0,0,0,0,0,0,1.72759505875258,0,0,0,0,0,0,0,0.37494122388632,0,0,0.470531639396343,0,1.1593682288866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0.107410557042488,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,1.24415452006595,0,0,0,0,0,0,0,0,0,0,1.60114149657094,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,2.7614397042404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.444925607568277,0,0,0.280272163313789,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0.31020638566432,0,0,0.490751168076215,0.365753774946808,0,0,0,0,2.33939463462106,6.76432635548652,0,0.22589216407792,0,1.96251696636676,0.154348316215889,0,0,0,0.471353094203252,0,0,0,0,0,0,0,0.178553938605658,0.705789743431384,0.160482733378337,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0.253397002022874,0,0,0.0918948995348449,0,0,0,0,0,0.213233981900981,0,0,0,0,0.381882949668989,0,0,0,0.0673520530145875,0.215166616178029,0,0.162806537221949,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr20:22565646..22565665,- | |||
}} |
Revision as of 07:46, 12 September 2013
Short description: | p@chr20:22565646..22565665, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr20:22565646..22565665, - |
Coexpression cluster: | C4016_gastrointestinal_anaplastic_maxillary_small_smallcell_argyrophil_Bronchial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.33e-11 | 12 |
lung fibroblast | 1.15e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
trunk region element | 8.86e-10 | 101 |
maxillary sinus | 8.91e-10 | 1 |
paranasal sinus | 8.91e-10 | 1 |
epithelial sac | 3.80e-08 | 25 |
sac | 7.95e-08 | 26 |
liver | 3.16e-07 | 19 |
digestive gland | 3.16e-07 | 19 |
liver bud | 3.16e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 4.46e-10 | 1 |
extraosseous chondrosarcoma | 4.46e-10 | 1 |
myxoid chondrosarcoma | 4.46e-10 | 1 |
extraskeletal myxoid chondrosarcoma | 4.46e-10 | 1 |
osteosarcoma | 5.31e-10 | 1 |
paranasal sinus cancer | 8.91e-10 | 1 |
maxillary sinus cancer | 8.91e-10 | 1 |
respiratory system cancer | 1.66e-08 | 16 |
carcinoma | 9.27e-08 | 106 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.