FFCP PHASE1:Hg19::chr2:241808165..241808178,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=189|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=341|TSSclassifier=S|UniProt=P21549|association_with_transcript=3bp_to_NM_000030,uc002waa.3,uc010zoi.1_5end|coexpression_cluster_id=C129|description=CAGE_peak_2_at_AGXT_5end|id=chr2:241808165..241808178,+|ontology_enrichment_celltype=CL:0000181!1.69e-29!12;CL:0000417!1.69e-29!12;CL:0000668!1.69e-29!12;CL:0000414!1.69e-29!12;CL:0000412!1.69e-29!12;CL:0000182!1.69e-29!12;CL:0000223!1.33e-07!59|ontology_enrichment_celltype_v019=CL:0000182;3.54e-13;12!CL:0002541;9.91e-07;3|ontology_enrichment_celltype_v019_2=CL:0000182,3.54e-13,12|ontology_enrichment_development_v019=UBERON:0004161;4.43e-07;11|ontology_enrichment_disease=DOID:178!2.96e-11!1;DOID:326!2.96e-11!1;DOID:3978!2.96e-11!1;DOID:3394!2.96e-11!1;DOID:5844!2.96e-11!1|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!6.75e-33!19;UBERON:0006925!6.75e-33!19;UBERON:0008836!6.75e-33!19;UBERON:0005057!5.34e-30!26;UBERON:0008835!2.67e-28!22;UBERON:0003894!2.67e-28!22;UBERON:0009854!4.94e-27!23;UBERON:0007499!8.41e-25!25;UBERON:0009497!8.41e-25!25;UBERON:0000015!8.41e-25!25;UBERON:0002423!8.41e-25!25;UBERON:0006235!8.41e-25!25;UBERON:0004161!8.41e-25!25;UBERON:0009856!8.16e-24!26;UBERON:0002365!7.84e-20!31;UBERON:0002330!7.84e-20!31;UBERON:0002368!1.83e-17!35;UBERON:0003929!6.88e-14!54;UBERON:0005172!1.40e-13!55;UBERON:0005173!1.40e-13!55;UBERON:0000949!2.24e-13!45;UBERON:0002417!3.97e-12!61;UBERON:0000916!3.97e-12!61;UBERON:0002530!5.63e-10!59;UBERON:0005911!9.81e-09!82;UBERON:0001041!4.32e-07!98|ontology_enrichment_uberon_v019=UBERON:0002107;4.19e-22;19!UBERON:0006925;4.19e-22;19!UBERON:0002423;7.82e-17;25!UBERON:0002365;1.45e-13;31!UBERON:0002330;1.45e-13;31!UBERON:0002368;9.07e-12;33!UBERON:0000949;1.31e-08;43!UBERON:0003124;9.91e-07;3!UBERON:0000920;9.91e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.19e-22,19;UBERON:0006925,4.19e-22,19;UBERON:0008836,4.19e-22,19;UBERON:0008835,4.12e-19,22;UBERON:0003894,4.12e-19,22;UBERON:0009854,2.76e-18,23;UBERON:0007499,7.82e-17,25;UBERON:0009497,7.82e-17,25;UBERON:0000015,7.82e-17,25;UBERON:0002423,7.82e-17,25;UBERON:0006235,7.82e-17,25;UBERON:0004161,7.82e-17,25;UBERON:0009856,3.44e-16,26;UBERON:0002365,1.36e-13,31;UBERON:0002330,1.36e-13,31;UBERON:0002368,4.78e-12,35;UBERON:0003929,6.02e-11,54;UBERON:0000949,2.25e-09,45;UBERON:0005172,8.25e-08,54;UBERON:0005173,8.25e-08,54;UBERON:0002530,3.81e-07,59;UBERON:0005911,4.00e-07,82;UBERON:0002417,5.03e-07,60;UBERON:0000916,5.03e-07,60|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,87.4609740270633,13.7595810334868,50.2171420679193,0,1.59884970106048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.1792057505666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.0318724477926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.16794564128926,0.108647371922008,1.5950057986596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88754497648161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,55.2501920966371,215.986228926921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p2@AGXT}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=189 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=341 | |||
|TSSclassifier=S | |||
|UniProt=P21549 | |||
|association_with_transcript=3bp_to_NM_000030,uc002waa.3,uc010zoi.1_5end | |||
|coexpression_cluster_id=C129 | |||
|description=CAGE_peak_2_at_AGXT_5end | |||
|id=chr2:241808165..241808178,+ | |||
|ontology_enrichment_celltype=CL:0000181!1.69e-29!12;CL:0000417!1.69e-29!12;CL:0000668!1.69e-29!12;CL:0000414!1.69e-29!12;CL:0000412!1.69e-29!12;CL:0000182!1.69e-29!12;CL:0000223!1.33e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.54e-13;12!CL:0002541;9.91e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.54e-13,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.43e-07;11 | |||
|ontology_enrichment_disease=DOID:178!2.96e-11!1;DOID:326!2.96e-11!1;DOID:3978!2.96e-11!1;DOID:3394!2.96e-11!1;DOID:5844!2.96e-11!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!6.75e-33!19;UBERON:0006925!6.75e-33!19;UBERON:0008836!6.75e-33!19;UBERON:0005057!5.34e-30!26;UBERON:0008835!2.67e-28!22;UBERON:0003894!2.67e-28!22;UBERON:0009854!4.94e-27!23;UBERON:0007499!8.41e-25!25;UBERON:0009497!8.41e-25!25;UBERON:0000015!8.41e-25!25;UBERON:0002423!8.41e-25!25;UBERON:0006235!8.41e-25!25;UBERON:0004161!8.41e-25!25;UBERON:0009856!8.16e-24!26;UBERON:0002365!7.84e-20!31;UBERON:0002330!7.84e-20!31;UBERON:0002368!1.83e-17!35;UBERON:0003929!6.88e-14!54;UBERON:0005172!1.40e-13!55;UBERON:0005173!1.40e-13!55;UBERON:0000949!2.24e-13!45;UBERON:0002417!3.97e-12!61;UBERON:0000916!3.97e-12!61;UBERON:0002530!5.63e-10!59;UBERON:0005911!9.81e-09!82;UBERON:0001041!4.32e-07!98 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.19e-22;19!UBERON:0006925;4.19e-22;19!UBERON:0002423;7.82e-17;25!UBERON:0002365;1.45e-13;31!UBERON:0002330;1.45e-13;31!UBERON:0002368;9.07e-12;33!UBERON:0000949;1.31e-08;43!UBERON:0003124;9.91e-07;3!UBERON:0000920;9.91e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.19e-22,19;UBERON:0006925,4.19e-22,19;UBERON:0008836,4.19e-22,19;UBERON:0008835,4.12e-19,22;UBERON:0003894,4.12e-19,22;UBERON:0009854,2.76e-18,23;UBERON:0007499,7.82e-17,25;UBERON:0009497,7.82e-17,25;UBERON:0000015,7.82e-17,25;UBERON:0002423,7.82e-17,25;UBERON:0006235,7.82e-17,25;UBERON:0004161,7.82e-17,25;UBERON:0009856,3.44e-16,26;UBERON:0002365,1.36e-13,31;UBERON:0002330,1.36e-13,31;UBERON:0002368,4.78e-12,35;UBERON:0003929,6.02e-11,54;UBERON:0000949,2.25e-09,45;UBERON:0005172,8.25e-08,54;UBERON:0005173,8.25e-08,54;UBERON:0002530,3.81e-07,59;UBERON:0005911,4.00e-07,82;UBERON:0002417,5.03e-07,60;UBERON:0000916,5.03e-07,60 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,87.4609740270633,13.7595810334868,50.2171420679193,0,1.59884970106048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.1792057505666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.0318724477926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.16794564128926,0.108647371922008,1.5950057986596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88754497648161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,55.2501920966371,215.986228926921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@AGXT | |||
}} |
Revision as of 17:48, 12 September 2013
Short description: | p2@AGXT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_AGXT_5end |
Coexpression cluster: | C129_liver_Hepatocyte_colon_duodenum_temporal_testicular_small |
Association with transcript: | 3bp_to_NM_000030, uc002waa.3, uc010zoi.1_5end |
EntrezGene: | AGXT |
HGNC: | 341 |
UniProt: | P21549 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.54e-13 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 4.19e-22 | 19 |
digestive gland | 4.19e-22 | 19 |
liver bud | 4.19e-22 | 19 |
hepatic diverticulum | 4.12e-19 | 22 |
liver primordium | 4.12e-19 | 22 |
digestive tract diverticulum | 2.76e-18 | 23 |
epithelial sac | 7.82e-17 | 25 |
epithelium of foregut-midgut junction | 7.82e-17 | 25 |
anatomical boundary | 7.82e-17 | 25 |
hepatobiliary system | 7.82e-17 | 25 |
foregut-midgut junction | 7.82e-17 | 25 |
septum transversum | 7.82e-17 | 25 |
sac | 3.44e-16 | 26 |
exocrine gland | 1.36e-13 | 31 |
exocrine system | 1.36e-13 | 31 |
endocrine gland | 4.78e-12 | 35 |
gut epithelium | 6.02e-11 | 54 |
endocrine system | 2.25e-09 | 45 |
abdomen element | 8.25e-08 | 54 |
abdominal segment element | 8.25e-08 | 54 |
gland | 3.81e-07 | 59 |
endo-epithelium | 4.00e-07 | 82 |
abdominal segment of trunk | 5.03e-07 | 60 |
abdomen | 5.03e-07 | 60 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.