FFCP PHASE1:Hg19::chr2:238767517..238767539,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10267|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9843|TSSclassifier=S|UniProt=E9PC20|association_with_transcript=0bp_to_ENST00000404910_5end|coexpression_cluster_id=C61|description=CAGE_peak_3_at_RAMP1_5end|id=chr2:238767517..238767539,+|ontology_enrichment_celltype=CL:0000990!1.85e-09!8;CL:0000451!4.99e-09!10;CL:0000453!2.16e-07!5|ontology_enrichment_celltype_v019=CL:0000990;2.58e-16;8!CL:0000451;4.01e-13;10!CL:0000453;1.51e-10;5!CL:0000840;2.39e-08;5|ontology_enrichment_celltype_v019_2=CL:0000990,2.41e-16,8;CL:0000451,3.79e-13,10;CL:0000453,1.57e-10,5;CL:0000840,2.25e-08,5;CL:0001029,2.25e-08,5|ontology_enrichment_development_v019=UBERON:0006601;4.18e-07;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:171;9.31e-07;10!DOID:114;9.51e-07;2|ontology_enrichment_disease_v019_2=DOID:171,5.97e-07,10;DOID:114,6.95e-07,2|ontology_enrichment_uberon=UBERON:0007023!7.22e-49!115;UBERON:0001049!1.33e-38!57;UBERON:0005068!1.33e-38!57;UBERON:0006241!1.33e-38!57;UBERON:0007135!1.33e-38!57;UBERON:0001017!2.88e-36!82;UBERON:0000073!1.96e-35!94;UBERON:0001016!1.96e-35!94;UBERON:0002780!5.76e-35!41;UBERON:0001890!5.76e-35!41;UBERON:0006240!5.76e-35!41;UBERON:0003080!8.45e-34!42;UBERON:0005743!1.31e-33!86;UBERON:0000955!2.22e-33!69;UBERON:0006238!2.22e-33!69;UBERON:0002616!6.41e-33!59;UBERON:0002020!1.35e-31!34;UBERON:0003528!1.35e-31!34;UBERON:0001893!2.94e-31!34;UBERON:0002791!2.24e-30!33;UBERON:0001869!8.53e-30!32;UBERON:0002346!9.38e-26!90;UBERON:0003075!5.13e-25!86;UBERON:0007284!5.13e-25!86;UBERON:0000956!1.41e-22!25;UBERON:0000203!1.41e-22!25;UBERON:0002619!5.15e-20!22;UBERON:0003056!5.26e-20!61;UBERON:0000924!6.39e-20!173;UBERON:0006601!6.39e-20!173;UBERON:0004121!3.97e-19!169;UBERON:0000153!5.14e-19!129;UBERON:0007811!5.14e-19!129;UBERON:0000033!1.54e-18!123;UBERON:0001950!5.20e-18!20;UBERON:0000025!1.09e-10!194;UBERON:0002420!1.25e-10!9;UBERON:0007245!1.25e-10!9;UBERON:0010009!1.25e-10!9;UBERON:0010011!1.25e-10!9;UBERON:0000454!1.25e-10!9;UBERON:0002308!1.85e-10!9;UBERON:0000125!1.85e-10!9;UBERON:0004111!4.94e-09!241;UBERON:0009663!1.06e-08!7;UBERON:0000475!1.78e-08!365;UBERON:0000481!1.85e-08!347;UBERON:0000477!2.86e-08!286;UBERON:0000468!4.83e-08!659;UBERON:0000922!4.99e-08!612;UBERON:0000200!5.46e-08!6;UBERON:0000483!7.89e-08!309;UBERON:0001871!1.50e-07!7;UBERON:0000119!1.53e-07!312;UBERON:0000062!4.99e-07!511;UBERON:0002050!7.94e-07!605;UBERON:0005423!7.94e-07!605|ontology_enrichment_uberon_v019=UBERON:0002791;1.11e-32;32!UBERON:0001869;5.18e-32;32!UBERON:0003528;4.27e-31;34!UBERON:0002020;4.27e-31;34!UBERON:0001893;2.62e-29;34!UBERON:0002619;1.61e-27;22!UBERON:0000956;5.29e-27;25!UBERON:0000203;5.29e-27;25!UBERON:0001950;2.34e-23;20!UBERON:0002780;6.55e-21;41!UBERON:0001890;6.55e-21;41!UBERON:0001017;1.24e-13;75!UBERON:0000073;7.99e-13;53!UBERON:0002616;7.99e-13;53!UBERON:0000955;1.06e-10;68!UBERON:0002420;1.21e-10;9!UBERON:0000125;1.21e-10;9!UBERON:0007245;1.21e-10;9!UBERON:0002308;1.21e-10;9!UBERON:0010009;1.21e-10;9!UBERON:0010011;1.21e-10;9!UBERON:0000454;1.21e-10;9!UBERON:0001016;4.92e-10;83!UBERON:0009663;6.18e-10;7!UBERON:0001871;1.21e-09;6!UBERON:0002021;2.17e-09;5!UBERON:0005383;4.37e-09;3!UBERON:0005382;4.37e-09;3!UBERON:0000200;3.32e-08;6!UBERON:0007023;3.18e-07;114!UBERON:0002702;3.41e-07;2!UBERON:0000369;6.63e-07;4!UBERON:0002435;6.63e-07;4!UBERON:0000204;6.63e-07;4!UBERON:0002771;8.48e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0003528,2.01e-36,34;UBERON:0002020,2.01e-36,34;UBERON:0002791,1.31e-35,32;UBERON:0001869,1.31e-35,32;UBERON:0001893,3.19e-33,34;UBERON:0007023,1.19e-30,114;UBERON:0002780,2.48e-29,41;UBERON:0001890,2.48e-29,41;UBERON:0003080,2.48e-29,41;UBERON:0006240,2.48e-29,41;UBERON:0001049,2.46e-28,56;UBERON:0005068,2.46e-28,56;UBERON:0006241,2.46e-28,56;UBERON:0007135,2.46e-28,56;UBERON:0002619,1.36e-27,22;UBERON:0000956,4.47e-27,25;UBERON:0000203,4.47e-27,25;UBERON:0001016,8.83e-26,89;UBERON:0000073,1.28e-25,53;UBERON:0002616,1.28e-25,53;UBERON:0001017,1.09e-23,81;UBERON:0001950,2.25e-23,20;UBERON:0000955,1.05e-21,68;UBERON:0006238,1.05e-21,68;UBERON:0002346,4.01e-19,86;UBERON:0003056,7.42e-18,61;UBERON:0003075,3.49e-17,82;UBERON:0007284,3.49e-17,82;UBERON:0010371,2.23e-13,104;UBERON:0004121,3.03e-12,171;UBERON:0000924,3.03e-12,171;UBERON:0006601,3.03e-12,171;UBERON:0010314,5.31e-11,132;UBERON:0002420,7.81e-11,9;UBERON:0007245,7.81e-11,9;UBERON:0010009,7.81e-11,9;UBERON:0010011,7.81e-11,9;UBERON:0000454,7.81e-11,9;UBERON:0000125,1.10e-10,9;UBERON:0002308,1.10e-10,9;UBERON:0009663,5.28e-10,7;UBERON:0001871,9.78e-10,6;UBERON:0002021,2.28e-09,5;UBERON:0005383,3.18e-09,3;UBERON:0005382,3.18e-09,3;UBERON:0011216,1.59e-08,223;UBERON:0000200,2.82e-08,6;UBERON:0000025,6.22e-08,192;UBERON:0002702,3.23e-07,2;UBERON:0000369,5.25e-07,4;UBERON:0002435,5.25e-07,4;UBERON:0000204,5.25e-07,4;UBERON:0010082,5.25e-07,4;UBERON:0002771,6.95e-07,2|phase1_expression=0.181678379270557,0,0.140954404095971,1.0007329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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10267 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9843 | |||
|TSSclassifier=S | |||
|UniProt=E9PC20 | |||
|association_with_transcript=0bp_to_ENST00000404910_5end | |||
|coexpression_cluster_id=C61 | |||
|description=CAGE_peak_3_at_RAMP1_5end | |||
|id=chr2:238767517..238767539,+ | |||
|ontology_enrichment_celltype=CL:0000990!1.85e-09!8;CL:0000451!4.99e-09!10;CL:0000453!2.16e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000990;2.58e-16;8!CL:0000451;4.01e-13;10!CL:0000453;1.51e-10;5!CL:0000840;2.39e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000990,2.41e-16,8;CL:0000451,3.79e-13,10;CL:0000453,1.57e-10,5;CL:0000840,2.25e-08,5;CL:0001029,2.25e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.18e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;9.31e-07;10!DOID:114;9.51e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:171,5.97e-07,10;DOID:114,6.95e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.22e-49!115;UBERON:0001049!1.33e-38!57;UBERON:0005068!1.33e-38!57;UBERON:0006241!1.33e-38!57;UBERON:0007135!1.33e-38!57;UBERON:0001017!2.88e-36!82;UBERON:0000073!1.96e-35!94;UBERON:0001016!1.96e-35!94;UBERON:0002780!5.76e-35!41;UBERON:0001890!5.76e-35!41;UBERON:0006240!5.76e-35!41;UBERON:0003080!8.45e-34!42;UBERON:0005743!1.31e-33!86;UBERON:0000955!2.22e-33!69;UBERON:0006238!2.22e-33!69;UBERON:0002616!6.41e-33!59;UBERON:0002020!1.35e-31!34;UBERON:0003528!1.35e-31!34;UBERON:0001893!2.94e-31!34;UBERON:0002791!2.24e-30!33;UBERON:0001869!8.53e-30!32;UBERON:0002346!9.38e-26!90;UBERON:0003075!5.13e-25!86;UBERON:0007284!5.13e-25!86;UBERON:0000956!1.41e-22!25;UBERON:0000203!1.41e-22!25;UBERON:0002619!5.15e-20!22;UBERON:0003056!5.26e-20!61;UBERON:0000924!6.39e-20!173;UBERON:0006601!6.39e-20!173;UBERON:0004121!3.97e-19!169;UBERON:0000153!5.14e-19!129;UBERON:0007811!5.14e-19!129;UBERON:0000033!1.54e-18!123;UBERON:0001950!5.20e-18!20;UBERON:0000025!1.09e-10!194;UBERON:0002420!1.25e-10!9;UBERON:0007245!1.25e-10!9;UBERON:0010009!1.25e-10!9;UBERON:0010011!1.25e-10!9;UBERON:0000454!1.25e-10!9;UBERON:0002308!1.85e-10!9;UBERON:0000125!1.85e-10!9;UBERON:0004111!4.94e-09!241;UBERON:0009663!1.06e-08!7;UBERON:0000475!1.78e-08!365;UBERON:0000481!1.85e-08!347;UBERON:0000477!2.86e-08!286;UBERON:0000468!4.83e-08!659;UBERON:0000922!4.99e-08!612;UBERON:0000200!5.46e-08!6;UBERON:0000483!7.89e-08!309;UBERON:0001871!1.50e-07!7;UBERON:0000119!1.53e-07!312;UBERON:0000062!4.99e-07!511;UBERON:0002050!7.94e-07!605;UBERON:0005423!7.94e-07!605 | |||
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|short_description=p3@RAMP1 | |||
}} |
Revision as of 17:40, 12 September 2013
Short description: | p3@RAMP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_RAMP1_5end |
Coexpression cluster: | C61_migratory_Dendritic_immature_Macrophage_xeroderma_cord_b |
Association with transcript: | 0bp_to_ENST00000404910_5end |
EntrezGene: | RAMP1 |
HGNC: | 9843 |
UniProt: | E9PC20 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
conventional dendritic cell | 2.41e-16 | 8 |
dendritic cell | 3.79e-13 | 10 |
Langerhans cell | 1.57e-10 | 5 |
immature conventional dendritic cell | 2.25e-08 | 5 |
common dendritic progenitor | 2.25e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 5.97e-07 | 10 |
heart disease | 6.95e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.