FFCP PHASE1:Hg19::chr2:228190043..228190054,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=56947|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24858|TSSclassifier=S|UniProt=C9J846|association_with_transcript=-26bp_to_ENST00000436237_5end|coexpression_cluster_id=C137|description=CAGE_peak_5_at_MFF_5end|id=chr2:228190043..228190054,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000182;9.09e-09;12!CL:0002253;9.45e-07;2|ontology_enrichment_celltype_v019_2=CL:0000182,1.34e-08,12;CL:0002253,8.24e-07,2|ontology_enrichment_development_v019=UBERON:0008947;3.17e-12;29!UBERON:0001041;2.92e-10;30!UBERON:0004161;6.06e-07;11|ontology_enrichment_disease=DOID:0050687!3.12e-10!143;DOID:305!1.14e-08!106;DOID:162!1.29e-08!235;DOID:14566!5.11e-08!239|ontology_enrichment_disease_v019=DOID:1324;7.18e-07;15|ontology_enrichment_disease_v019_2=DOID:305,1.10e-12,106;DOID:0050687,2.20e-09,143;DOID:1324,5.33e-07,15|ontology_enrichment_uberon=UBERON:0000481!3.32e-07!347|ontology_enrichment_uberon_v019=UBERON:0001737;4.68e-11;9!UBERON:0001557;4.68e-11;9!UBERON:0000072;2.22e-08;37!UBERON:0002107;5.61e-07;19!UBERON:0006925;5.61e-07;19|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.72e-11,9;UBERON:0008947,6.71e-09,38;UBERON:0003258,6.71e-09,38;UBERON:0001041,8.31e-08,87;UBERON:0001048,1.07e-07,160;UBERON:0004921,1.43e-07,118;UBERON:0002107,7.14e-07,19;UBERON:0006925,7.14e-07,19;UBERON:0008836,7.14e-07,19|phase1_expression=0.54503513781167,0.214100523890983,0.422863212287913,0,0.446961094427288,0,0,0,0.261185628199839,0.491467873003018,0,0,0,0.990130823680373,0.662794751455832,1.34465029290355,0.602694528023977,0,0.487932798790507,0,0.204000691244253,0,0.286235987131057,0.136874425072884,0.376627918784408,0.152826811495903,0.57470412614962,0.550975469195755,0,0,0.154816123316076,0,0,0.369754010166788,0.232401601740905,0.568676929949686,0.587200878669695,0,0,0.217010870715852,0,0.32389366601898,0.257575567634187,0.145398238779565,0,0,0.232429036905685,0,0,0.575384784644301,0,0.236482229888585,0,0,0,0.188242339542605,0,0,0,0,0,0.989553900560148,0,0.426224750532694,0.290209238628584,0.56738522469114,0,0.75374599577023,0,0.217188844705117,0.605399502633369,0,0,0,0,0,0.112328631146495,0,0.32145117339416,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0.569212969109448,0,0,1.32171328579026,0,0,0.196709770113833,0,0,0.167186495390678,0,0,0,0.111410456885174,0.294605907474837,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.255725123687061,1.44575660953827,0.50133791063589,0.434539556882471,2.3858578411533,0,0.472674085820339,0.221729397462564,0.087834785693126,0.982343066232845,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0.626984899610432,0,0,0.33472061276467,0,0,0,0,0,0.267899184852239,0,0.112611480483322,0,0,0,0,0,0,0.496971951695318,0.633152558322899,0.264818361626438,0,0,0,0,0.24666754841716,0.311211035399766,0.808264032418128,0.817309515567294,0,0,0.468642863667593,0.624320153660641,0,0.298897361103602,0.469737994575059,0.161872944368132,0.421352420106746,0,0.122834317311768,0.413303124703062,0,0.989067717114227,0,0,0.168336113954066,0.250237039743928,0.554128230968366,0,0.919463387397059,0.751190294532984,0.567160915800105,0.179389635688862,0.213557388818567,1.27159140695737,0,0.412210116953756,0.257640540045629,0.18611685633159,0.168776332241266,0.292311015483596,0.252433774244115,0.276149695926898,0.484938170456436,0,0.10075209822764,0.508681776931463,0.386521706326594,0,0.573609190778008,0.121973706129595,0.397589304964456,0.348581828608555,0.310983165046111,1.00928340350251,1.45990943630332,0,0,0,0.464367928031979,0,0.828147600278907,1.51726221070292,1.44606617930089,0.330881918197182,1.08939722046203,1.42362371466658,1.21348177344148,1.37355025587742,0.38474715694639,0,1.40241773803446,0.4115740113314,0,0,0.982827216677626,0,0.882926198829301,0.368965315629341,0.686271241194102,0.109750285408626,0,0,0,0,0,0,0.695582429850461,0.70445216541493,0.288732895522148,0.462985512576611,0.570762456703795,0,0,0,0,0,0,0.839910640994298,0.283550194484773,0.53735113621709,0.290633938513962,0.383382679165211,0,0.176096868026452,0.207328115540772,0.144119953416961,0,0.126995788584338,0.381988425558278,0,0,0.102827492703324,0.300343057843917,0.285826432630578,0,0.87192013766656,0.22001485746285,0.129271715757778,0,1.690605505112,0,0,0,0,0.266422179016099,1.28680194292333,0,0,0,0.710783897485092,0.791951872933429,0,0,0.299918973546171,0,0,0,0,0,1.42636905040718,0.868687840005475,1.02738161275192,0.537182889719687,0.224170287987055,0,0.215627574859517,0.128343036279748,0.508189248444927,0,0.773288812777695,0.335032530668698,1.27587750330633,0,0,0,0.736148950314839,1.00034104211935,0,0.207970861530807,1.42743191037729,0.630809660135739,0.468565659970853,0.601892199455438,0,0,0,0,0.347534457872331,0,0,0.206768026122887,0,0.106727557803444,0,0,0.30239029332968,0.248107807818777,0,0.280660094433074,0,0,0.321707842287215,0,0.462629081407967,0.355123450626254,0.739144404124282,0.519254429183621,0.813472649219715,0.483437798366489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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=56947 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24858 | |||
|TSSclassifier=S | |||
|UniProt=C9J846 | |||
|association_with_transcript=-26bp_to_ENST00000436237_5end | |||
|coexpression_cluster_id=C137 | |||
|description=CAGE_peak_5_at_MFF_5end | |||
|id=chr2:228190043..228190054,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000182;9.09e-09;12!CL:0002253;9.45e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.34e-08,12;CL:0002253,8.24e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.17e-12;29!UBERON:0001041;2.92e-10;30!UBERON:0004161;6.06e-07;11 | |||
|ontology_enrichment_disease=DOID:0050687!3.12e-10!143;DOID:305!1.14e-08!106;DOID:162!1.29e-08!235;DOID:14566!5.11e-08!239 | |||
|ontology_enrichment_disease_v019=DOID:1324;7.18e-07;15 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.10e-12,106;DOID:0050687,2.20e-09,143;DOID:1324,5.33e-07,15 | |||
|ontology_enrichment_uberon=UBERON:0000481!3.32e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;4.68e-11;9!UBERON:0001557;4.68e-11;9!UBERON:0000072;2.22e-08;37!UBERON:0002107;5.61e-07;19!UBERON:0006925;5.61e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.72e-11,9;UBERON:0008947,6.71e-09,38;UBERON:0003258,6.71e-09,38;UBERON:0001041,8.31e-08,87;UBERON:0001048,1.07e-07,160;UBERON:0004921,1.43e-07,118;UBERON:0002107,7.14e-07,19;UBERON:0006925,7.14e-07,19;UBERON:0008836,7.14e-07,19 | |||
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| |||
|short_description=p5@MFF | |||
}} |
Revision as of 17:12, 12 September 2013
Short description: | p5@MFF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_MFF_5end |
Coexpression cluster: | C137_large_ductal_melanoma_cervical_Endothelial_Smooth_chronic |
Association with transcript: | -26bp_to_ENST00000436237_5end |
EntrezGene: | MFF |
HGNC: | 24858 |
UniProt: | C9J846 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.34e-08 | 12 |
epithelial cell of large intestine | 8.24e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.72e-11 | 9 |
respiratory primordium | 6.71e-09 | 38 |
endoderm of foregut | 6.71e-09 | 38 |
foregut | 8.31e-08 | 87 |
primordium | 1.07e-07 | 160 |
subdivision of digestive tract | 1.43e-07 | 118 |
liver | 7.14e-07 | 19 |
digestive gland | 7.14e-07 | 19 |
liver bud | 7.14e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.10e-12 | 106 |
cell type cancer | 2.20e-09 | 143 |
lung cancer | 5.33e-07 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.