FFCP PHASE1:Hg19::chr2:225907391..225907414,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55619|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=23479|TSSclassifier=S|UniProt=Q68DA4,Q96BY6|association_with_transcript=-61bp_to_NM_014689,uc002vod.1,uc010fwz.1_5end|coexpression_cluster_id=C4|description=CAGE_peak_6_at_DOCK10_5end|id=chr2:225907391..225907414,-|ontology_enrichment_celltype=CL:0000057!5.67e-10!75;CL:0002620!1.73e-09!23;CL:0002320!2.01e-08!365;CL:0000134!3.71e-08!358;CL:0000219!2.95e-07!390;CL:0000048!4.49e-07!430;CL:0000723!8.92e-07!436|ontology_enrichment_celltype_v019=CL:0002620;1.80e-10;23!CL:0000097;4.42e-07;5|ontology_enrichment_celltype_v019_2=CL:0002620,1.68e-10,23;CL:0000057,1.77e-08,76;CL:0000134,3.05e-08,354;CL:0000219,1.50e-07,386;CL:0002320,1.57e-07,361;CL:0000097,4.45e-07,5;CL:0002028,4.45e-07,5|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!3.77e-13!57;UBERON:0005068!3.77e-13!57;UBERON:0006241!3.77e-13!57;UBERON:0007135!3.77e-13!57;UBERON:0002616!2.53e-10!59;UBERON:0002780!1.15e-09!41;UBERON:0001890!1.15e-09!41;UBERON:0006240!1.15e-09!41;UBERON:0002020!1.16e-09!34;UBERON:0003528!1.16e-09!34;UBERON:0001893!1.34e-09!34;UBERON:0002791!4.26e-09!33;UBERON:0003080!4.58e-09!42;UBERON:0000955!1.10e-08!69;UBERON:0006238!1.10e-08!69;UBERON:0002384!1.90e-08!375;UBERON:0001869!1.94e-08!32;UBERON:0007023!8.17e-08!115;UBERON:0003075!3.85e-07!86;UBERON:0007284!3.85e-07!86;UBERON:0001017!4.44e-07!82|ontology_enrichment_uberon_v019=UBERON:0001893;6.05e-10;34!UBERON:0003528;1.17e-09;34!UBERON:0002020;1.17e-09;34!UBERON:0000073;3.68e-09;53!UBERON:0002616;3.68e-09;53!UBERON:0002791;5.40e-09;32!UBERON:0002780;6.32e-09;41!UBERON:0001890;6.32e-09;41!UBERON:0001869;8.40e-09;32!UBERON:0002619;2.85e-08;22!UBERON:0000125;1.90e-07;9!UBERON:0002308;1.90e-07;9!UBERON:0002298;2.17e-07;6!UBERON:0001950;3.29e-07;20!UBERON:0002420;4.10e-07;9!UBERON:0007245;4.10e-07;9!UBERON:0010009;4.10e-07;9!UBERON:0010011;4.10e-07;9!UBERON:0000454;4.10e-07;9!UBERON:0000956;9.72e-07;25!UBERON:0000203;9.72e-07;25|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.05e-17,56;UBERON:0005068,1.05e-17,56;UBERON:0006241,1.05e-17,56;UBERON:0007135,1.05e-17,56;UBERON:0000073,2.59e-15,53;UBERON:0002616,2.59e-15,53;UBERON:0002780,4.49e-12,41;UBERON:0001890,4.49e-12,41;UBERON:0003080,4.49e-12,41;UBERON:0006240,4.49e-12,41;UBERON:0003528,5.39e-12,34;UBERON:0002020,5.39e-12,34;UBERON:0001893,6.56e-12,34;UBERON:0000955,3.14e-11,68;UBERON:0006238,3.14e-11,68;UBERON:0003075,1.39e-10,82;UBERON:0007284,1.39e-10,82;UBERON:0002791,2.26e-10,32;UBERON:0001869,3.03e-10,32;UBERON:0001016,4.38e-10,89;UBERON:0001017,5.56e-10,81;UBERON:0002346,1.70e-09,86;UBERON:0010314,3.26e-09,132;UBERON:0002619,1.66e-08,22;UBERON:0002298,1.82e-07,6;UBERON:0000125,2.36e-07,9;UBERON:0002308,2.36e-07,9;UBERON:0001950,2.55e-07,20;UBERON:0002384,3.44e-07,371;UBERON:0010371,3.49e-07,104;UBERON:0002420,3.71e-07,9;UBERON:0007245,3.71e-07,9;UBERON:0010009,3.71e-07,9;UBERON:0010011,3.71e-07,9;UBERON:0000454,3.71e-07,9;UBERON:0003056,3.88e-07,61;UBERON:0003076,4.64e-07,15;UBERON:0003057,4.64e-07,15;UBERON:0000956,6.16e-07,25;UBERON:0000203,6.16e-07,25;UBERON:0007023,7.30e-07,114|phase1_expression=0.181678379270557,0.214100523890983,0.563817616383885,0,0,0,0,0.631719873426831,0,0,0,0,0,0.247532705920093,0.994192127183747,0.672325146451775,0.602694528023977,2.19093027116212,0.975865597581014,0,0.408001382488506,0,0,0.273748850145768,0.251085279189606,2.52164238968239,4.02292888304734,3.14843125254717,0,1.53531759238885,0.154816123316076,0,0,0,0,0,0.587200878669695,0.553995408531877,2.00544447470142,1.51907609501096,0.895661896959697,1.29557466407592,0.515151135268373,0.581592955118259,0.377875943688809,0.485168122375632,0.697287110717054,0.411167888021826,0,0.28769239232215,0,0.236482229888585,0.344745680736619,0,0,1.12945403725563,0,0,0.612167784741805,0.641858054152187,0.639337125799041,0.329851300186716,0.398927315243264,0,1.16083695451434,1.13477044938228,1.86846674698672,0.75374599577023,1.5644487552606,0.65156653411535,0.605399502633369,0.736555271975129,0,0.211255286311942,0.850417199860174,0,0.112328631146495,0.300353785683013,0.32145117339416,0.285012743741249,0.19891667719909,0.182664153764634,0,0,0.889509253863555,0.426730222566507,0,0,0,0,0.569212969109448,0,0.382273228125229,0,0,0,1.57367816091066,2.75107533924415,1.64481199199607,0.501559486172034,0.32592226663359,0,0,1.00269411196656,1.17842362989935,0.886135578334485,0,1.15282187753108,0.520237390239513,0.986627427622057,2.21080014228679,0.579606171470105,0.889719378972363,0.535081656179426,3.1360657141493,1.24640276967323,1.53288197440768,1.03088233644789,1.26509846009751,0,1.30216690771284,0,0.752875595388864,1.53583933385302,1.24930726552346,0.947109008176067,0,1.61285394579786,1.60464117470104,1.30341963494519,0,0,0.12786256184353,1.0843174571537,0,0.289693037921647,0,0,0.283604451492204,0.886917589850256,0.5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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=55619 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23479 | |||
|TSSclassifier=S | |||
|UniProt=Q68DA4,Q96BY6 | |||
|association_with_transcript=-61bp_to_NM_014689,uc002vod.1,uc010fwz.1_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_6_at_DOCK10_5end | |||
|id=chr2:225907391..225907414,- | |||
|ontology_enrichment_celltype=CL:0000057!5.67e-10!75;CL:0002620!1.73e-09!23;CL:0002320!2.01e-08!365;CL:0000134!3.71e-08!358;CL:0000219!2.95e-07!390;CL:0000048!4.49e-07!430;CL:0000723!8.92e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.80e-10;23!CL:0000097;4.42e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.68e-10,23;CL:0000057,1.77e-08,76;CL:0000134,3.05e-08,354;CL:0000219,1.50e-07,386;CL:0002320,1.57e-07,361;CL:0000097,4.45e-07,5;CL:0002028,4.45e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.77e-13!57;UBERON:0005068!3.77e-13!57;UBERON:0006241!3.77e-13!57;UBERON:0007135!3.77e-13!57;UBERON:0002616!2.53e-10!59;UBERON:0002780!1.15e-09!41;UBERON:0001890!1.15e-09!41;UBERON:0006240!1.15e-09!41;UBERON:0002020!1.16e-09!34;UBERON:0003528!1.16e-09!34;UBERON:0001893!1.34e-09!34;UBERON:0002791!4.26e-09!33;UBERON:0003080!4.58e-09!42;UBERON:0000955!1.10e-08!69;UBERON:0006238!1.10e-08!69;UBERON:0002384!1.90e-08!375;UBERON:0001869!1.94e-08!32;UBERON:0007023!8.17e-08!115;UBERON:0003075!3.85e-07!86;UBERON:0007284!3.85e-07!86;UBERON:0001017!4.44e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;6.05e-10;34!UBERON:0003528;1.17e-09;34!UBERON:0002020;1.17e-09;34!UBERON:0000073;3.68e-09;53!UBERON:0002616;3.68e-09;53!UBERON:0002791;5.40e-09;32!UBERON:0002780;6.32e-09;41!UBERON:0001890;6.32e-09;41!UBERON:0001869;8.40e-09;32!UBERON:0002619;2.85e-08;22!UBERON:0000125;1.90e-07;9!UBERON:0002308;1.90e-07;9!UBERON:0002298;2.17e-07;6!UBERON:0001950;3.29e-07;20!UBERON:0002420;4.10e-07;9!UBERON:0007245;4.10e-07;9!UBERON:0010009;4.10e-07;9!UBERON:0010011;4.10e-07;9!UBERON:0000454;4.10e-07;9!UBERON:0000956;9.72e-07;25!UBERON:0000203;9.72e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.05e-17,56;UBERON:0005068,1.05e-17,56;UBERON:0006241,1.05e-17,56;UBERON:0007135,1.05e-17,56;UBERON:0000073,2.59e-15,53;UBERON:0002616,2.59e-15,53;UBERON:0002780,4.49e-12,41;UBERON:0001890,4.49e-12,41;UBERON:0003080,4.49e-12,41;UBERON:0006240,4.49e-12,41;UBERON:0003528,5.39e-12,34;UBERON:0002020,5.39e-12,34;UBERON:0001893,6.56e-12,34;UBERON:0000955,3.14e-11,68;UBERON:0006238,3.14e-11,68;UBERON:0003075,1.39e-10,82;UBERON:0007284,1.39e-10,82;UBERON:0002791,2.26e-10,32;UBERON:0001869,3.03e-10,32;UBERON:0001016,4.38e-10,89;UBERON:0001017,5.56e-10,81;UBERON:0002346,1.70e-09,86;UBERON:0010314,3.26e-09,132;UBERON:0002619,1.66e-08,22;UBERON:0002298,1.82e-07,6;UBERON:0000125,2.36e-07,9;UBERON:0002308,2.36e-07,9;UBERON:0001950,2.55e-07,20;UBERON:0002384,3.44e-07,371;UBERON:0010371,3.49e-07,104;UBERON:0002420,3.71e-07,9;UBERON:0007245,3.71e-07,9;UBERON:0010009,3.71e-07,9;UBERON:0010011,3.71e-07,9;UBERON:0000454,3.71e-07,9;UBERON:0003056,3.88e-07,61;UBERON:0003076,4.64e-07,15;UBERON:0003057,4.64e-07,15;UBERON:0000956,6.16e-07,25;UBERON:0000203,6.16e-07,25;UBERON:0007023,7.30e-07,114 | |||
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| |||
|short_description=p6@DOCK10 | |||
}} |
Revision as of 17:10, 12 September 2013
Short description: | p6@DOCK10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_DOCK10_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -61bp_to_NM_014689, uc002vod.1, uc010fwz.1_5end |
EntrezGene: | DOCK10 |
HGNC: | 23479 |
UniProt: | Q68DA4Q96BY6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.68e-10 | 23 |
fibroblast | 1.77e-08 | 76 |
mesenchymal cell | 3.05e-08 | 354 |
motile cell | 1.50e-07 | 386 |
connective tissue cell | 1.57e-07 | 361 |
mast cell | 4.45e-07 | 5 |
basophil mast progenitor cell | 4.45e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.