FFCP PHASE1:Hg19::chr2:189876710..189876721,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=|TSSclassifier=S|UniProt=Q9H394|association_with_transcript=81bp_to_AF130082_5end|coexpression_cluster_id=C292|description=CAGE_peak_7_at_AF130082_5end|id=chr2:189876710..189876721,+|ontology_enrichment_celltype=CL:0000055!1.95e-20!180;CL:0000680!2.07e-12!57;CL:0000056!2.07e-12!57;CL:0000355!2.07e-12!57;CL:0000187!4.59e-12!54;CL:0000057!5.40e-11!75;CL:0000183!8.18e-11!59;CL:0000393!1.94e-10!60;CL:0000211!1.94e-10!60;CL:0000192!7.66e-10!42;CL:0000514!7.66e-10!42;CL:0000359!4.29e-07!32;CL:0000048!6.20e-07!430|ontology_enrichment_celltype_v019=CL:0002615;6.34e-08;3!CL:0000135;7.22e-08;3!CL:0000388;7.22e-08;3!CL:0002580;1.76e-07;3!CL:0002504;2.42e-07;3!CL:1000279;2.42e-07;3!CL:1000280;2.42e-07;3|ontology_enrichment_celltype_v019_2=CL:0000135,4.37e-08,3;CL:0000388,4.37e-08,3;CL:0002615,8.67e-08,3;CL:0002580,2.03e-07,3;CL:0002504,3.56e-07,3;CL:1000279,3.56e-07,3;CL:1000280,3.56e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:2394!6.15e-07!14|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001134!4.22e-13!61;UBERON:0002036!4.22e-13!61;UBERON:0003082!4.22e-13!61;UBERON:0002385!5.64e-13!63;UBERON:0001015!5.64e-13!63;UBERON:0000383!5.64e-13!63;UBERON:0004290!6.84e-10!70;UBERON:0000914!1.91e-08!83;UBERON:0002329!1.91e-08!83;UBERON:0003077!1.91e-08!83;UBERON:0003059!1.91e-08!83;UBERON:0007282!1.91e-08!83;UBERON:0009618!1.91e-08!83;UBERON:0007285!1.91e-08!83;UBERON:0007100!3.09e-07!27;UBERON:0004872!3.21e-07!84;UBERON:0001135!4.18e-07!15;UBERON:0000948!5.27e-07!24;UBERON:0005498!5.27e-07!24;UBERON:0004140!5.27e-07!24;UBERON:0009881!5.27e-07!24;UBERON:0004141!5.27e-07!24;UBERON:0003084!5.27e-07!24;UBERON:0007005!5.27e-07!24;UBERON:0004139!5.27e-07!24;UBERON:0004291!5.27e-07!24;UBERON:0003688!5.64e-07!6;UBERON:0002358!5.64e-07!6;UBERON:0003684!5.64e-07!6;UBERON:0001178!5.64e-07!6;UBERON:0000486!6.96e-07!82|ontology_enrichment_uberon_v019=UBERON:0003688;2.86e-10;6!UBERON:0002358;2.86e-10;6!UBERON:0003684;2.86e-10;6!UBERON:0001178;2.86e-10;6!UBERON:0007846;7.22e-08;3!UBERON:0000043;7.22e-08;3!UBERON:0007845;7.22e-08;3!UBERON:0001443;3.06e-07;11|ontology_enrichment_uberon_v019_2=UBERON:0003688,4.10e-10,6;UBERON:0002358,4.10e-10,6;UBERON:0003684,4.10e-10,6;UBERON:0001178,4.10e-10,6;UBERON:0007846,4.37e-08,3;UBERON:0000043,4.37e-08,3;UBERON:0007845,4.37e-08,3;UBERON:0001443,2.97e-07,11|phase1_expression=3.81524596468169,1.49870366723688,3.24195129420734,3.00219895059391,1.34088328328186,0.872338524100369,0,0,0.522371256399677,0.245733936501509,0,0.873765488520689,1.58260186937072,0.866364470720326,0,0.672325146451775,1.20538905604795,0.730310090387373,1.46379839637152,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53435074212236,0.722878304769133,0.50133791063589,0.869079113764942,1.5905718941022,3.40644409211845,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0.506522046658319,0.529636723252875,2.58152958673932,0.354668382198357,0.560677600142307,1.06748995729705,0.24666754841716,0.622422070799533,0,0.490385709340376,0.605429710579726,1.15235184896,0,0,0,0,0,0,0,0.204154171254893,0.122834317311768,0.103325781175765,0,0.494533858557114,0,0,0,0,0,0,0,0.45071417671979,0.907457465280168,0.358779271377724,2.13557388818567,1.05965950579781,0.600182192168805,0.618315175430633,0.515281080091258,1.30281799432113,0.843881661206331,0.0974370051611986,0,2.48534726334208,0.161646056818812,0.355009592516614,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,1.39310378409594,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,3.23179289394444,0,1.690605505112,0.26593811658487,0,0,0,0,3.86040582876998,13.0229185293946,0,0.65147236858747,2.13235169245527,0,1.20575750823834,0.871533458600294,0.299918973546171,0,0,0,0.479249710983165,0,0,0.434343920002738,0,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,2.33113834266366,0,0.271265023699736,3.11956292296211,1.42743191037729,0.315404830067869,0.937131319941706,1.20378439891088,2.27407504055985,0,0,0.184369168541703,0.260650843404249,0.195801157462741,0,0,0,0,0.303127571446259,0,0,3.47350930946288,1.2276957863045,1.40330047216537,7.68834895534206,0.511707249066704,2.2519548960105,0,0.308419387605311,0.710246901252508,0.246381468041427,0,0.116210378459959,0,0,0,1.60740227430449,0.546273504020151,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.290012154876366,0.154048617114644,0.460511024178389,0,1.50388342815583,0.435050081742686,0.255679882248303,1.86967274858148,0,0,0,0,0.464845549297286,0.62962469366128,0,0.92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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt=Q9H394 | |||
|association_with_transcript=81bp_to_AF130082_5end | |||
|coexpression_cluster_id=C292 | |||
|description=CAGE_peak_7_at_AF130082_5end | |||
|id=chr2:189876710..189876721,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.95e-20!180;CL:0000680!2.07e-12!57;CL:0000056!2.07e-12!57;CL:0000355!2.07e-12!57;CL:0000187!4.59e-12!54;CL:0000057!5.40e-11!75;CL:0000183!8.18e-11!59;CL:0000393!1.94e-10!60;CL:0000211!1.94e-10!60;CL:0000192!7.66e-10!42;CL:0000514!7.66e-10!42;CL:0000359!4.29e-07!32;CL:0000048!6.20e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0002615;6.34e-08;3!CL:0000135;7.22e-08;3!CL:0000388;7.22e-08;3!CL:0002580;1.76e-07;3!CL:0002504;2.42e-07;3!CL:1000279;2.42e-07;3!CL:1000280;2.42e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,4.37e-08,3;CL:0000388,4.37e-08,3;CL:0002615,8.67e-08,3;CL:0002580,2.03e-07,3;CL:0002504,3.56e-07,3;CL:1000279,3.56e-07,3;CL:1000280,3.56e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!6.15e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!4.22e-13!61;UBERON:0002036!4.22e-13!61;UBERON:0003082!4.22e-13!61;UBERON:0002385!5.64e-13!63;UBERON:0001015!5.64e-13!63;UBERON:0000383!5.64e-13!63;UBERON:0004290!6.84e-10!70;UBERON:0000914!1.91e-08!83;UBERON:0002329!1.91e-08!83;UBERON:0003077!1.91e-08!83;UBERON:0003059!1.91e-08!83;UBERON:0007282!1.91e-08!83;UBERON:0009618!1.91e-08!83;UBERON:0007285!1.91e-08!83;UBERON:0007100!3.09e-07!27;UBERON:0004872!3.21e-07!84;UBERON:0001135!4.18e-07!15;UBERON:0000948!5.27e-07!24;UBERON:0005498!5.27e-07!24;UBERON:0004140!5.27e-07!24;UBERON:0009881!5.27e-07!24;UBERON:0004141!5.27e-07!24;UBERON:0003084!5.27e-07!24;UBERON:0007005!5.27e-07!24;UBERON:0004139!5.27e-07!24;UBERON:0004291!5.27e-07!24;UBERON:0003688!5.64e-07!6;UBERON:0002358!5.64e-07!6;UBERON:0003684!5.64e-07!6;UBERON:0001178!5.64e-07!6;UBERON:0000486!6.96e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;2.86e-10;6!UBERON:0002358;2.86e-10;6!UBERON:0003684;2.86e-10;6!UBERON:0001178;2.86e-10;6!UBERON:0007846;7.22e-08;3!UBERON:0000043;7.22e-08;3!UBERON:0007845;7.22e-08;3!UBERON:0001443;3.06e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,4.10e-10,6;UBERON:0002358,4.10e-10,6;UBERON:0003684,4.10e-10,6;UBERON:0001178,4.10e-10,6;UBERON:0007846,4.37e-08,3;UBERON:0000043,4.37e-08,3;UBERON:0007845,4.37e-08,3;UBERON:0001443,2.97e-07,11 | |||
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| |||
|short_description=p7@AF130082 | |||
}} |
Revision as of 15:39, 12 September 2013
Short description: | p7@AF130082 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_AF130082_5end |
Coexpression cluster: | C292_Mesenchymal_skin_umbilical_Adipocyte_mesenchymal_Chondrocyte_skeletal |
Association with transcript: | 81bp_to_AF130082_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 4.37e-08 | 3 |
tendon cell | 4.37e-08 | 3 |
adipocyte of omentum tissue | 8.67e-08 | 3 |
preadipocyte of the breast | 2.03e-07 | 3 |
enteric smooth muscle cell | 3.56e-07 | 3 |
smooth muscle cell of large intestine | 3.56e-07 | 3 |
smooth muscle cell of colon | 3.56e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 4.10e-10 | 6 |
peritoneum | 4.10e-10 | 6 |
abdominal cavity | 4.10e-10 | 6 |
visceral peritoneum | 4.10e-10 | 6 |
dense regular connective tissue | 4.37e-08 | 3 |
tendon | 4.37e-08 | 3 |
regular connective tissue | 4.37e-08 | 3 |
chest | 2.97e-07 | 11 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.