FFCP PHASE1:Hg19::chr2:113981853..113981863,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C30|description=CAGE_peak_at_chr2:113981853..113981863,-|id=chr2:113981853..113981863,-|ontology_enrichment_celltype=CL:0000159!5.95e-11!2;CL:1000497!4.98e-09!18;CL:0002518!4.98e-09!18|ontology_enrichment_celltype_v019=CL:0000239;2.89e-12;3!CL:1000615;2.89e-12;3!CL:0002306;2.89e-12;3!CL:1000497;1.00e-08;17!CL:0002518;1.00e-08;17!CL:0002149;8.02e-07;6!CL:0002255;8.02e-07;6|ontology_enrichment_celltype_v019_2=CL:0000239,2.59e-12,3;CL:1000615,2.59e-12,3;CL:0002306,2.59e-12,3;CL:1000497,9.62e-09,17;CL:0002518,9.62e-09,17;CL:0002149,8.02e-07,6;CL:0002255,8.02e-07,6|ontology_enrichment_development_v019=UBERON:0007123;5.35e-08;5|ontology_enrichment_disease=DOID:4468!7.23e-11!2;DOID:120!3.72e-10!27;DOID:193!2.28e-09!29|ontology_enrichment_disease_v019=DOID:4468;6.48e-18;2!DOID:3001;8.02e-07;6|ontology_enrichment_disease_v019_2=DOID:4468,6.48e-18,2;DOID:3001,8.02e-07,6|ontology_enrichment_uberon=UBERON:0002046!6.66e-16!5;UBERON:0004117!6.66e-16!5;UBERON:0007689!6.66e-16!5;UBERON:0007123!6.66e-16!5;UBERON:0003091!6.66e-16!5;UBERON:0002113!9.33e-13!27;UBERON:0003918!9.33e-13!27;UBERON:0005095!9.33e-13!27;UBERON:0007687!9.33e-13!27;UBERON:0000341!1.23e-10!2;UBERON:0000489!1.62e-10!32;UBERON:0006947!1.39e-07!3;UBERON:0004054!1.39e-07!3;UBERON:0009722!2.92e-07!11;UBERON:0007690!2.92e-07!11;UBERON:0006554!3.16e-07!44;UBERON:0001008!4.94e-07!45;UBERON:0003886!8.73e-07!63;UBERON:0006555!8.96e-07!17;UBERON:0005103!8.96e-07!17;UBERON:0000083!8.96e-07!17;UBERON:0009201!8.96e-07!17;UBERON:0004819!8.96e-07!17;UBERON:0006553!8.96e-07!17;UBERON:0003074!8.96e-07!17;UBERON:0003060!8.96e-07!17;UBERON:0005172!9.00e-07!55;UBERON:0005173!9.00e-07!55|ontology_enrichment_uberon_v019=UBERON:0001000;7.06e-34;1!UBERON:0005352;7.06e-34;1!UBERON:0006853;2.89e-12;3!UBERON:0007685;2.89e-12;3!UBERON:0004134;2.89e-12;3!UBERON:0006947;2.89e-12;3!UBERON:0004054;2.89e-12;3!UBERON:0005904;1.57e-09;4!UBERON:0002046;5.35e-08;5!UBERON:0004175;2.86e-07;21|ontology_enrichment_uberon_v019_2=UBERON:0001000,9.85e-34,1;UBERON:0005352,9.85e-34,1;UBERON:0006853,2.59e-12,3;UBERON:0007685,2.59e-12,3;UBERON:0004134,2.59e-12,3;UBERON:0006947,3.24e-12,3;UBERON:0004054,3.24e-12,3;UBERON:0005904,1.70e-09,4;UBERON:0002046,5.35e-08,5;UBERON:0004117,5.35e-08,5;UBERON:0007689,5.35e-08,5;UBERON:0007123,5.35e-08,5;UBERON:0003091,5.35e-08,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0.501689773854853,0,1.66215201785745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445234820091624,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,6.96293612942489,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18375320854817,0,0,0,0,0,0,0,0,0,0,0,2.42983633669183,0,0,0.52418000472609,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630445658393585,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0.310525913752519,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512483037175893,0,0,0,0,0,0,0,0.737318726261158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431855182437243,1.43325506366115,0,0,0,0,0,0,0,0,0,0,0,0,0.68732060563215,0,0,0.559277158988962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0.952257725854961,0,0,0.224263725161227,0.572824424503484,13.7439688491589,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0|short_description=p@chr2:113981853..113981863,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C30 | |||
|description=CAGE_peak_at_chr2:113981853..113981863,- | |||
|id=chr2:113981853..113981863,- | |||
|ontology_enrichment_celltype=CL:0000159!5.95e-11!2;CL:1000497!4.98e-09!18;CL:0002518!4.98e-09!18 | |||
|ontology_enrichment_celltype_v019=CL:0000239;2.89e-12;3!CL:1000615;2.89e-12;3!CL:0002306;2.89e-12;3!CL:1000497;1.00e-08;17!CL:0002518;1.00e-08;17!CL:0002149;8.02e-07;6!CL:0002255;8.02e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.59e-12,3;CL:1000615,2.59e-12,3;CL:0002306,2.59e-12,3;CL:1000497,9.62e-09,17;CL:0002518,9.62e-09,17;CL:0002149,8.02e-07,6;CL:0002255,8.02e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0007123;5.35e-08;5 | |||
|ontology_enrichment_disease=DOID:4468!7.23e-11!2;DOID:120!3.72e-10!27;DOID:193!2.28e-09!29 | |||
|ontology_enrichment_disease_v019=DOID:4468;6.48e-18;2!DOID:3001;8.02e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,6.48e-18,2;DOID:3001,8.02e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0002046!6.66e-16!5;UBERON:0004117!6.66e-16!5;UBERON:0007689!6.66e-16!5;UBERON:0007123!6.66e-16!5;UBERON:0003091!6.66e-16!5;UBERON:0002113!9.33e-13!27;UBERON:0003918!9.33e-13!27;UBERON:0005095!9.33e-13!27;UBERON:0007687!9.33e-13!27;UBERON:0000341!1.23e-10!2;UBERON:0000489!1.62e-10!32;UBERON:0006947!1.39e-07!3;UBERON:0004054!1.39e-07!3;UBERON:0009722!2.92e-07!11;UBERON:0007690!2.92e-07!11;UBERON:0006554!3.16e-07!44;UBERON:0001008!4.94e-07!45;UBERON:0003886!8.73e-07!63;UBERON:0006555!8.96e-07!17;UBERON:0005103!8.96e-07!17;UBERON:0000083!8.96e-07!17;UBERON:0009201!8.96e-07!17;UBERON:0004819!8.96e-07!17;UBERON:0006553!8.96e-07!17;UBERON:0003074!8.96e-07!17;UBERON:0003060!8.96e-07!17;UBERON:0005172!9.00e-07!55;UBERON:0005173!9.00e-07!55 | |||
|ontology_enrichment_uberon_v019=UBERON:0001000;7.06e-34;1!UBERON:0005352;7.06e-34;1!UBERON:0006853;2.89e-12;3!UBERON:0007685;2.89e-12;3!UBERON:0004134;2.89e-12;3!UBERON:0006947;2.89e-12;3!UBERON:0004054;2.89e-12;3!UBERON:0005904;1.57e-09;4!UBERON:0002046;5.35e-08;5!UBERON:0004175;2.86e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001000,9.85e-34,1;UBERON:0005352,9.85e-34,1;UBERON:0006853,2.59e-12,3;UBERON:0007685,2.59e-12,3;UBERON:0004134,2.59e-12,3;UBERON:0006947,3.24e-12,3;UBERON:0004054,3.24e-12,3;UBERON:0005904,1.70e-09,4;UBERON:0002046,5.35e-08,5;UBERON:0004117,5.35e-08,5;UBERON:0007689,5.35e-08,5;UBERON:0007123,5.35e-08,5;UBERON:0003091,5.35e-08,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0.501689773854853,0,1.66215201785745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445234820091624,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,6.96293612942489,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18375320854817,0,0,0,0,0,0,0,0,0,0,0,2.42983633669183,0,0,0.52418000472609,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630445658393585,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0.310525913752519,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512483037175893,0,0,0,0,0,0,0,0.737318726261158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431855182437243,1.43325506366115,0,0,0,0,0,0,0,0,0,0,0,0,0.68732060563215,0,0,0.559277158988962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0.952257725854961,0,0,0.224263725161227,0.572824424503484,13.7439688491589,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p@chr2:113981853..113981863,- | |||
}} |
Revision as of 13:08, 12 September 2013
Short description: | p@chr2:113981853..113981863, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:113981853..113981863, - |
Coexpression cluster: | C30_thyroid_throat_mesothelioma_mucinous_trachea_chorionic_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.59e-12 | 3 |
kidney cortex tubule cell | 2.59e-12 | 3 |
epithelial cell of proximal tubule | 2.59e-12 | 3 |
kidney cell | 9.62e-09 | 17 |
kidney epithelial cell | 9.62e-09 | 17 |
epithelial cell of uterus | 8.02e-07 | 6 |
stromal cell of endometrium | 8.02e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
vas deferens | 9.85e-34 | 1 |
spermatic cord | 9.85e-34 | 1 |
renal cortex tubule | 2.59e-12 | 3 |
region of nephron tubule | 2.59e-12 | 3 |
proximal tubule | 2.59e-12 | 3 |
male genital duct | 3.24e-12 | 3 |
internal male genitalia | 3.24e-12 | 3 |
duct of male reproductive system | 1.70e-09 | 4 |
thyroid gland | 5.35e-08 | 5 |
pharyngeal pouch | 5.35e-08 | 5 |
thyroid diverticulum | 5.35e-08 | 5 |
pharyngeal pouch 2 | 5.35e-08 | 5 |
thyroid primordium | 5.35e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 6.48e-18 | 2 |
female reproductive endometrioid cancer | 8.02e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.