FFCP PHASE1:Hg19::chr2:74555328..74555345,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=57835|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=18168|TSSclassifier=S|UniProt=Q9BY07|association_with_transcript=-15bp_to_uc002skp.1_5end|coexpression_cluster_id=C41|description=CAGE_peak_5_at_SLC4A5_5end|id=chr2:74555328..74555345,-|ontology_enrichment_celltype=CL:0002322!1.61e-11!5|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0003056;6.73e-11;3!UBERON:0006215;1.04e-10;3!UBERON:0007123;6.21e-07;5|ontology_enrichment_disease=DOID:2355!3.40e-07!1|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!5.90e-24!69;UBERON:0006238!5.90e-24!69;UBERON:0005743!1.38e-23!86;UBERON:0001049!1.93e-23!57;UBERON:0005068!1.93e-23!57;UBERON:0006241!1.93e-23!57;UBERON:0007135!1.93e-23!57;UBERON:0002616!1.50e-22!59;UBERON:0003075!2.70e-21!86;UBERON:0007284!2.70e-21!86;UBERON:0000073!5.19e-21!94;UBERON:0001016!5.19e-21!94;UBERON:0002346!3.48e-20!90;UBERON:0001017!1.14e-19!82;UBERON:0007023!5.15e-19!115;UBERON:0000153!4.86e-18!129;UBERON:0007811!4.86e-18!129;UBERON:0000033!3.66e-17!123;UBERON:0003056!2.65e-16!61;UBERON:0002780!2.70e-15!41;UBERON:0001890!2.70e-15!41;UBERON:0006240!2.70e-15!41;UBERON:0003080!6.81e-15!42;UBERON:0001905!5.87e-14!2;UBERON:0002757!5.87e-14!2;UBERON:0010134!5.87e-14!2;UBERON:0002784!5.87e-14!2;UBERON:0005408!5.87e-14!2;UBERON:0001899!5.87e-14!2;UBERON:0001950!5.71e-13!20;UBERON:0004733!8.52e-13!12;UBERON:0002028!8.52e-13!12;UBERON:0007277!8.52e-13!12;UBERON:0004732!8.54e-12!13;UBERON:0002619!9.04e-12!22;UBERON:0004121!2.73e-11!169;UBERON:0002680!2.82e-11!9;UBERON:0001895!2.82e-11!9;UBERON:0010092!2.82e-11!9;UBERON:0001872!3.67e-11!5;UBERON:0000924!6.17e-11!173;UBERON:0006601!6.17e-11!173;UBERON:0000956!2.57e-10!25;UBERON:0000203!2.57e-10!25;UBERON:0003076!3.43e-10!15;UBERON:0003057!3.43e-10!15;UBERON:0002037!3.96e-10!6;UBERON:0006215!3.96e-10!6;UBERON:0002791!5.90e-10!33;UBERON:0001893!1.22e-09!34;UBERON:0001894!8.62e-09!7;UBERON:0006222!8.62e-09!7;UBERON:0001869!5.94e-08!32;UBERON:0002902!1.72e-07!1;UBERON:0009899!1.72e-07!1;UBERON:0002020!1.88e-07!34;UBERON:0003528!1.88e-07!34;UBERON:0003296!2.14e-07!4;UBERON:0010133!2.14e-07!4;UBERON:0002336!4.09e-07!1;UBERON:0001018!4.09e-07!1;UBERON:0002473!4.09e-07!1;UBERON:0005340!4.09e-07!1;UBERON:0002316!4.09e-07!1;UBERON:0003544!4.09e-07!1;UBERON:0001020!4.09e-07!1;UBERON:0005970!4.09e-07!1;UBERON:0002437!4.09e-07!1;UBERON:0002581!4.34e-07!1;UBERON:0002022!4.90e-07!1|ontology_enrichment_uberon_v019=UBERON:0001905;4.77e-57;2!UBERON:0002757;4.77e-57;2!UBERON:0010134;4.77e-57;2!UBERON:0005408;4.77e-57;2!UBERON:0001899;4.77e-57;2!UBERON:0003296;3.65e-29;4!UBERON:0010133;3.65e-29;4!UBERON:0002784;3.65e-29;4!UBERON:0001894;3.71e-17;7!UBERON:0002368;1.43e-07;33!UBERON:0000966;4.79e-07;5!UBERON:0005388;4.79e-07;5!UBERON:0001802;4.79e-07;5!UBERON:0002046;6.21e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0001905,4.77e-57,2;UBERON:0002757,4.77e-57,2;UBERON:0010134,4.77e-57,2;UBERON:0005408,4.77e-57,2;UBERON:0001899,4.77e-57,2;UBERON:0003296,3.65e-29,4;UBERON:0010133,3.65e-29,4;UBERON:0002784,3.65e-29,4;UBERON:0001894,3.71e-17,7;UBERON:0006222,3.71e-17,7;UBERON:0002368,5.87e-08,35;UBERON:0000955,6.23e-07,68;UBERON:0006238,6.23e-07,68;UBERON:0002046,6.77e-07,5;UBERON:0004117,6.77e-07,5;UBERON:0007689,6.77e-07,5;UBERON:0007123,6.77e-07,5;UBERON:0003091,6.77e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,1.52581736317083,0.663475559587348,0.591095237907095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.468528891450678,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.84167259326905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=57835 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18168 | |||
|TSSclassifier=S | |||
|UniProt=Q9BY07 | |||
|association_with_transcript=-15bp_to_uc002skp.1_5end | |||
|coexpression_cluster_id=C41 | |||
|description=CAGE_peak_5_at_SLC4A5_5end | |||
|id=chr2:74555328..74555345,- | |||
|ontology_enrichment_celltype=CL:0002322!1.61e-11!5 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;6.73e-11;3!UBERON:0006215;1.04e-10;3!UBERON:0007123;6.21e-07;5 | |||
|ontology_enrichment_disease=DOID:2355!3.40e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!5.90e-24!69;UBERON:0006238!5.90e-24!69;UBERON:0005743!1.38e-23!86;UBERON:0001049!1.93e-23!57;UBERON:0005068!1.93e-23!57;UBERON:0006241!1.93e-23!57;UBERON:0007135!1.93e-23!57;UBERON:0002616!1.50e-22!59;UBERON:0003075!2.70e-21!86;UBERON:0007284!2.70e-21!86;UBERON:0000073!5.19e-21!94;UBERON:0001016!5.19e-21!94;UBERON:0002346!3.48e-20!90;UBERON:0001017!1.14e-19!82;UBERON:0007023!5.15e-19!115;UBERON:0000153!4.86e-18!129;UBERON:0007811!4.86e-18!129;UBERON:0000033!3.66e-17!123;UBERON:0003056!2.65e-16!61;UBERON:0002780!2.70e-15!41;UBERON:0001890!2.70e-15!41;UBERON:0006240!2.70e-15!41;UBERON:0003080!6.81e-15!42;UBERON:0001905!5.87e-14!2;UBERON:0002757!5.87e-14!2;UBERON:0010134!5.87e-14!2;UBERON:0002784!5.87e-14!2;UBERON:0005408!5.87e-14!2;UBERON:0001899!5.87e-14!2;UBERON:0001950!5.71e-13!20;UBERON:0004733!8.52e-13!12;UBERON:0002028!8.52e-13!12;UBERON:0007277!8.52e-13!12;UBERON:0004732!8.54e-12!13;UBERON:0002619!9.04e-12!22;UBERON:0004121!2.73e-11!169;UBERON:0002680!2.82e-11!9;UBERON:0001895!2.82e-11!9;UBERON:0010092!2.82e-11!9;UBERON:0001872!3.67e-11!5;UBERON:0000924!6.17e-11!173;UBERON:0006601!6.17e-11!173;UBERON:0000956!2.57e-10!25;UBERON:0000203!2.57e-10!25;UBERON:0003076!3.43e-10!15;UBERON:0003057!3.43e-10!15;UBERON:0002037!3.96e-10!6;UBERON:0006215!3.96e-10!6;UBERON:0002791!5.90e-10!33;UBERON:0001893!1.22e-09!34;UBERON:0001894!8.62e-09!7;UBERON:0006222!8.62e-09!7;UBERON:0001869!5.94e-08!32;UBERON:0002902!1.72e-07!1;UBERON:0009899!1.72e-07!1;UBERON:0002020!1.88e-07!34;UBERON:0003528!1.88e-07!34;UBERON:0003296!2.14e-07!4;UBERON:0010133!2.14e-07!4;UBERON:0002336!4.09e-07!1;UBERON:0001018!4.09e-07!1;UBERON:0002473!4.09e-07!1;UBERON:0005340!4.09e-07!1;UBERON:0002316!4.09e-07!1;UBERON:0003544!4.09e-07!1;UBERON:0001020!4.09e-07!1;UBERON:0005970!4.09e-07!1;UBERON:0002437!4.09e-07!1;UBERON:0002581!4.34e-07!1;UBERON:0002022!4.90e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;4.77e-57;2!UBERON:0002757;4.77e-57;2!UBERON:0010134;4.77e-57;2!UBERON:0005408;4.77e-57;2!UBERON:0001899;4.77e-57;2!UBERON:0003296;3.65e-29;4!UBERON:0010133;3.65e-29;4!UBERON:0002784;3.65e-29;4!UBERON:0001894;3.71e-17;7!UBERON:0002368;1.43e-07;33!UBERON:0000966;4.79e-07;5!UBERON:0005388;4.79e-07;5!UBERON:0001802;4.79e-07;5!UBERON:0002046;6.21e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,4.77e-57,2;UBERON:0002757,4.77e-57,2;UBERON:0010134,4.77e-57,2;UBERON:0005408,4.77e-57,2;UBERON:0001899,4.77e-57,2;UBERON:0003296,3.65e-29,4;UBERON:0010133,3.65e-29,4;UBERON:0002784,3.65e-29,4;UBERON:0001894,3.71e-17,7;UBERON:0006222,3.71e-17,7;UBERON:0002368,5.87e-08,35;UBERON:0000955,6.23e-07,68;UBERON:0006238,6.23e-07,68;UBERON:0002046,6.77e-07,5;UBERON:0004117,6.77e-07,5;UBERON:0007689,6.77e-07,5;UBERON:0007123,6.77e-07,5;UBERON:0003091,6.77e-07,5 | |||
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|short_description=p5@SLC4A5 | |||
}} |
Revision as of 19:46, 12 September 2013
Short description: | p5@SLC4A5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_SLC4A5_5end |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | -15bp_to_uc002skp.1_5end |
EntrezGene: | SLC4A5 |
HGNC: | 18168 |
UniProt: | Q9BY07 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 4.77e-57 | 2 |
regional part of epithalamus | 4.77e-57 | 2 |
secretory circumventricular organ | 4.77e-57 | 2 |
circumventricular organ | 4.77e-57 | 2 |
epithalamus | 4.77e-57 | 2 |
gland of diencephalon | 3.65e-29 | 4 |
neuroendocrine gland | 3.65e-29 | 4 |
regional part of diencephalon | 3.65e-29 | 4 |
diencephalon | 3.71e-17 | 7 |
future diencephalon | 3.71e-17 | 7 |
endocrine gland | 5.87e-08 | 35 |
brain | 6.23e-07 | 68 |
future brain | 6.23e-07 | 68 |
thyroid gland | 6.77e-07 | 5 |
pharyngeal pouch | 6.77e-07 | 5 |
thyroid diverticulum | 6.77e-07 | 5 |
pharyngeal pouch 2 | 6.77e-07 | 5 |
thyroid primordium | 6.77e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.