FFCP PHASE1:Hg19::chr19:49941642..49941657,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=57030|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16704|TSSclassifier=S|UniProt=|association_with_transcript=-71bp_to_uc002pnq.1_5end|coexpression_cluster_id=C3159|description=CAGE_peak_6_at_SLC17A7_5end|id=chr19:49941642..49941657,-|ontology_enrichment_celltype=CL:0000047!8.38e-07!8|ontology_enrichment_celltype_v019=CL:0000540;1.93e-07;6!CL:0000404;1.93e-07;6|ontology_enrichment_celltype_v019_2=CL:0000047,2.01e-11,8;CL:0000540,2.02e-07,6;CL:0000031,2.02e-07,6;CL:0000404,2.02e-07,6|ontology_enrichment_development_v019=UBERON:0006215;3.52e-14;3!UBERON:0006601;2.58e-08;82!CL:0000031;1.93e-07;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002619!5.28e-72!22;UBERON:0001017!4.53e-67!82;UBERON:0005743!9.88e-64!86;UBERON:0000956!3.10e-63!25;UBERON:0000203!3.10e-63!25;UBERON:0001893!5.56e-63!34;UBERON:0001950!4.45e-62!20;UBERON:0000955!1.93e-61!69;UBERON:0006238!1.93e-61!69;UBERON:0001869!6.68e-61!32;UBERON:0002791!9.54e-59!33;UBERON:0000073!3.17e-57!94;UBERON:0001016!3.17e-57!94;UBERON:0001049!6.27e-57!57;UBERON:0005068!6.27e-57!57;UBERON:0006241!6.27e-57!57;UBERON:0007135!6.27e-57!57;UBERON:0002780!7.55e-57!41;UBERON:0001890!7.55e-57!41;UBERON:0006240!7.55e-57!41;UBERON:0003080!2.06e-55!42;UBERON:0002616!7.59e-55!59;UBERON:0002020!1.99e-51!34;UBERON:0003528!1.99e-51!34;UBERON:0003075!3.04e-42!86;UBERON:0007284!3.04e-42!86;UBERON:0003056!1.63e-40!61;UBERON:0002346!3.96e-40!90;UBERON:0000033!8.57e-35!123;UBERON:0007023!3.83e-33!115;UBERON:0000153!6.52e-33!129;UBERON:0007811!6.52e-33!129;UBERON:0004121!1.93e-29!169;UBERON:0000924!1.27e-28!173;UBERON:0006601!1.27e-28!173;UBERON:0000349!1.78e-27!5;UBERON:0001871!4.61e-24!7;UBERON:0000200!3.75e-22!6;UBERON:0001872!1.13e-17!5;UBERON:0002021!9.74e-17!5;UBERON:0002771!1.11e-16!3;UBERON:0000025!5.44e-13!194;UBERON:0001954!4.19e-12!2;UBERON:0003022!4.19e-12!2;UBERON:0002421!4.19e-12!2;UBERON:0002600!4.19e-12!2;UBERON:0001876!4.43e-12!2;UBERON:0000064!6.99e-11!219;UBERON:0002680!8.24e-10!9;UBERON:0001895!8.24e-10!9;UBERON:0010092!8.24e-10!9;UBERON:0004111!2.17e-09!241;UBERON:0002037!6.28e-09!6;UBERON:0006215!6.28e-09!6;UBERON:0000477!1.02e-08!286;UBERON:0000483!2.10e-08!309;UBERON:0000119!2.89e-08!312;UBERON:0000475!1.19e-07!365;UBERON:0004733!2.25e-07!12;UBERON:0002028!2.25e-07!12;UBERON:0007277!2.25e-07!12;UBERON:0002022!5.13e-07!1;UBERON:0003112!8.03e-07!1;UBERON:0000032!8.03e-07!1;UBERON:0005253!8.03e-07!1;UBERON:0003128!8.03e-07!1;UBERON:0002241!8.03e-07!1;UBERON:0001703!8.03e-07!1;UBERON:0004761!8.03e-07!1;UBERON:0009617!8.03e-07!1;UBERON:0004732!8.25e-07!13;UBERON:0001882!8.97e-07!1;UBERON:0005403!8.97e-07!1|ontology_enrichment_uberon_v019=UBERON:0002619;3.24e-67;22!UBERON:0000956;3.00e-59;25!UBERON:0000203;3.00e-59;25!UBERON:0001869;5.74e-57;32!UBERON:0001893;6.73e-53;34!UBERON:0001950;1.46e-52;20!UBERON:0002791;7.64e-49;32!UBERON:0003528;1.97e-47;34!UBERON:0002020;1.97e-47;34!UBERON:0000349;5.79e-47;5!UBERON:0002780;1.19e-34;41!UBERON:0001890;1.19e-34;41!UBERON:0001872;2.35e-30;5!UBERON:0000073;1.22e-26;53!UBERON:0002616;1.22e-26;53!UBERON:0000200;3.99e-25;6!UBERON:0001871;8.74e-22;6!UBERON:0001954;3.17e-20;2!UBERON:0003022;3.17e-20;2!UBERON:0002421;3.17e-20;2!UBERON:0002600;3.17e-20;2!UBERON:0001876;1.16e-19;2!UBERON:0000955;6.97e-15;68!UBERON:0001016;3.56e-14;83!UBERON:0001870;1.12e-13;3!UBERON:0001017;1.15e-12;75!UBERON:0002022;4.57e-11;1!UBERON:0002581;1.05e-10;1!UBERON:0001882;1.05e-10;1!UBERON:0003112;1.05e-10;1!UBERON:0011158;1.05e-10;1!UBERON:0007190;1.05e-10;1!UBERON:0003128;1.05e-10;1!UBERON:0005403;1.05e-10;1!UBERON:0001703;1.05e-10;1!UBERON:0002241;1.05e-10;1!UBERON:0002420;6.17e-10;9!UBERON:0007245;6.17e-10;9!UBERON:0010009;6.17e-10;9!UBERON:0010011;6.17e-10;9!UBERON:0000454;6.17e-10;9!UBERON:0002037;1.59e-07;6!UBERON:0007023;2.20e-07;114|ontology_enrichment_uberon_v019_2=UBERON:0002619,2.92e-67,22;UBERON:0001869,9.25e-62,32;UBERON:0000956,2.74e-59,25;UBERON:0000203,2.74e-59,25;UBERON:0001893,4.15e-58,34;UBERON:0002791,8.50e-54,32;UBERON:0001950,1.12e-52,20;UBERON:0003528,1.32e-50,34;UBERON:0002020,1.32e-50,34;UBERON:0002780,4.60e-48,41;UBERON:0001890,4.60e-48,41;UBERON:0003080,4.60e-48,41;UBERON:0006240,4.60e-48,41;UBERON:0000073,4.70e-48,53;UBERON:0002616,4.70e-48,53;UBERON:0000349,3.27e-47,5;UBERON:0001049,2.13e-45,56;UBERON:0005068,2.13e-45,56;UBERON:0006241,2.13e-45,56;UBERON:0007135,2.13e-45,56;UBERON:0001017,6.11e-43,81;UBERON:0001016,1.76e-38,89;UBERON:0000955,1.64e-36,68;UBERON:0006238,1.64e-36,68;UBERON:0003056,7.69e-32,61;UBERON:0003075,2.12e-30,82;UBERON:0007284,2.12e-30,82;UBERON:0001872,3.58e-30,5;UBERON:0002346,6.91e-29,86;UBERON:0000200,6.61e-25,6;UBERON:0010371,1.70e-23,104;UBERON:0001871,3.99e-22,6;UBERON:0007023,1.74e-21,114;UBERON:0010314,2.10e-20,132;UBERON:0001954,4.45e-20,2;UBERON:0003022,4.45e-20,2;UBERON:0002421,4.45e-20,2;UBERON:0002600,4.45e-20,2;UBERON:0001876,4.90e-20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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=57030 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16704 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-71bp_to_uc002pnq.1_5end | |||
|coexpression_cluster_id=C3159 | |||
|description=CAGE_peak_6_at_SLC17A7_5end | |||
|id=chr19:49941642..49941657,- | |||
|ontology_enrichment_celltype=CL:0000047!8.38e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000540;1.93e-07;6!CL:0000404;1.93e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,2.01e-11,8;CL:0000540,2.02e-07,6;CL:0000031,2.02e-07,6;CL:0000404,2.02e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.52e-14;3!UBERON:0006601;2.58e-08;82!CL:0000031;1.93e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p6@SLC17A7 | |||
}} |
Revision as of 21:47, 11 September 2013
Short description: | p6@SLC17A7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_SLC17A7_5end |
Coexpression cluster: | C3159_cerebellum_parietal_hippocampus_temporal_insula_frontal_postcentral |
Association with transcript: | -71bp_to_uc002pnq.1_5end |
EntrezGene: | SLC17A7 |
HGNC: | 16704 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 2.01e-11 | 8 |
neuron | 2.02e-07 | 6 |
neuroblast | 2.02e-07 | 6 |
electrically signaling cell | 2.02e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.