FFCP PHASE1:Hg19::chr19:35630943..35630987,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5348|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4025|TSSclassifier=S|UniProt=O00168|association_with_transcript=0bp_to_AB463657,BC032800,EU176238,EU176531_5end|description=CAGE_peak_10_at_FXYD1_5end|id=chr19:35630943..35630987,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0003104;3.11e-08;31!UBERON:0006603;3.83e-08;65!UBERON:0005062;8.54e-08;4!UBERON:0007284;8.54e-08;4!UBERON:0007297;4.56e-07;2!UBERON:0010122;9.57e-07;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:114;3.29e-07;2|ontology_enrichment_disease_v019_2=DOID:114,1.71e-07,2|ontology_enrichment_uberon=UBERON:0007023!6.16e-81!115;UBERON:0001049!4.55e-29!57;UBERON:0005068!4.55e-29!57;UBERON:0006241!4.55e-29!57;UBERON:0007135!4.55e-29!57;UBERON:0003075!3.82e-24!86;UBERON:0007284!3.82e-24!86;UBERON:0002616!2.97e-23!59;UBERON:0003080!2.12e-22!42;UBERON:0002346!2.23e-22!90;UBERON:0002780!3.64e-21!41;UBERON:0001890!3.64e-21!41;UBERON:0006240!3.64e-21!41;UBERON:0005743!3.70e-21!86;UBERON:0001017!1.41e-20!82;UBERON:0000955!2.38e-20!69;UBERON:0006238!2.38e-20!69;UBERON:0000073!8.24e-18!94;UBERON:0001016!8.24e-18!94;UBERON:0001893!3.74e-16!34;UBERON:0002020!5.34e-16!34;UBERON:0003528!5.34e-16!34;UBERON:0003056!1.64e-15!61;UBERON:0002791!1.92e-15!33;UBERON:0000153!9.65e-15!129;UBERON:0007811!9.65e-15!129;UBERON:0001869!2.21e-14!32;UBERON:0000033!1.14e-13!123;UBERON:0002619!3.41e-12!22;UBERON:0000475!3.92e-12!365;UBERON:0000481!5.32e-12!347;UBERON:0000062!1.47e-11!511;UBERON:0004111!9.21e-11!241;UBERON:0004121!9.44e-11!169;UBERON:0000025!1.95e-10!194;UBERON:0001950!2.76e-10!20;UBERON:0000956!3.15e-10!25;UBERON:0000203!3.15e-10!25;UBERON:0000924!3.73e-10!173;UBERON:0006601!3.73e-10!173;UBERON:0000477!6.03e-10!286;UBERON:0002298!2.01e-09!8;UBERON:0000483!6.22e-09!309;UBERON:0000468!7.80e-09!659;UBERON:0000119!1.19e-08!312;UBERON:0000467!6.46e-08!625;UBERON:0000480!7.55e-08!626;UBERON:0003076!8.15e-08!15;UBERON:0003057!8.15e-08!15;UBERON:0000064!1.01e-07!219;UBERON:0002308!1.17e-07!9;UBERON:0000125!1.17e-07!9;UBERON:0000200!1.26e-07!6;UBERON:0000479!4.21e-07!787|ontology_enrichment_uberon_v019=UBERON:0007023;1.72e-17;114!UBERON:0003978;2.84e-10;3!UBERON:0000946;2.84e-10;3!UBERON:0002133;2.12e-07;2!UBERON:0005090;2.23e-07;2!UBERON:0001630;2.23e-07;2!UBERON:0003296;2.59e-07;4!UBERON:0010133;2.59e-07;4!UBERON:0002780;5.61e-07;41!UBERON:0001890;5.61e-07;41!UBERON:0007100;7.10e-07;25!UBERON:0000341;9.57e-07;2!UBERON:0000007;9.57e-07;2!UBERON:0001873;9.57e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.58e-64,114;UBERON:0003978,2.61e-10,3;UBERON:0009751,2.61e-10,3;UBERON:0000946,2.61e-10,3;UBERON:0002523,2.61e-10,3;UBERON:0005983,2.61e-10,3;UBERON:0002165,2.61e-10,3;UBERON:0002062,2.61e-10,3;UBERON:0007280,2.61e-10,3;UBERON:0000073,1.80e-08,53;UBERON:0002616,1.80e-08,53;UBERON:0003103,5.16e-08,68;UBERON:0001049,7.41e-08,56;UBERON:0005068,7.41e-08,56;UBERON:0006241,7.41e-08,56;UBERON:0007135,7.41e-08,56;UBERON:0000955,8.43e-08,68;UBERON:0006238,8.43e-08,68;UBERON:0005090,1.76e-07,2;UBERON:0001630,1.76e-07,2;UBERON:0002133,2.34e-07,2;UBERON:0002780,2.72e-07,41;UBERON:0001890,2.72e-07,41;UBERON:0003080,2.72e-07,41;UBERON:0006240,2.72e-07,41;UBERON:0003296,3.62e-07,4;UBERON:0010133,3.62e-07,4;UBERON:0003075,4.62e-07,82;UBERON:0007284,4.62e-07,82;UBERON:0000341,5.75e-07,2;UBERON:0001017,6.31e-07,81|phase1_expression=0,0.428201047781966,0,0,0.893922188854576,0,0,0,0.783556884599516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0.144846518960824,0,0.973269740605272,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300476117813194,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0.0920498986422993,0.484938170456436,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0.845302752556,0,0,0,0,0,0,0.542621605391443,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655622074797121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,3.09123034943167,0.0915694648183434,0,0.574265537996172,0,0,0.096670718292122,0,0,0,0.107420244868274,0,0,0.178064071293475,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31178950409327,0,0,0,0,0,0,0,0.633322905892992,0.6585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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5348 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4025 | |||
|TSSclassifier=S | |||
|UniProt=O00168 | |||
|association_with_transcript=0bp_to_AB463657,BC032800,EU176238,EU176531_5end | |||
|description=CAGE_peak_10_at_FXYD1_5end | |||
|id=chr19:35630943..35630987,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003104;3.11e-08;31!UBERON:0006603;3.83e-08;65!UBERON:0005062;8.54e-08;4!UBERON:0007284;8.54e-08;4!UBERON:0007297;4.56e-07;2!UBERON:0010122;9.57e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;3.29e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.71e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.16e-81!115;UBERON:0001049!4.55e-29!57;UBERON:0005068!4.55e-29!57;UBERON:0006241!4.55e-29!57;UBERON:0007135!4.55e-29!57;UBERON:0003075!3.82e-24!86;UBERON:0007284!3.82e-24!86;UBERON:0002616!2.97e-23!59;UBERON:0003080!2.12e-22!42;UBERON:0002346!2.23e-22!90;UBERON:0002780!3.64e-21!41;UBERON:0001890!3.64e-21!41;UBERON:0006240!3.64e-21!41;UBERON:0005743!3.70e-21!86;UBERON:0001017!1.41e-20!82;UBERON:0000955!2.38e-20!69;UBERON:0006238!2.38e-20!69;UBERON:0000073!8.24e-18!94;UBERON:0001016!8.24e-18!94;UBERON:0001893!3.74e-16!34;UBERON:0002020!5.34e-16!34;UBERON:0003528!5.34e-16!34;UBERON:0003056!1.64e-15!61;UBERON:0002791!1.92e-15!33;UBERON:0000153!9.65e-15!129;UBERON:0007811!9.65e-15!129;UBERON:0001869!2.21e-14!32;UBERON:0000033!1.14e-13!123;UBERON:0002619!3.41e-12!22;UBERON:0000475!3.92e-12!365;UBERON:0000481!5.32e-12!347;UBERON:0000062!1.47e-11!511;UBERON:0004111!9.21e-11!241;UBERON:0004121!9.44e-11!169;UBERON:0000025!1.95e-10!194;UBERON:0001950!2.76e-10!20;UBERON:0000956!3.15e-10!25;UBERON:0000203!3.15e-10!25;UBERON:0000924!3.73e-10!173;UBERON:0006601!3.73e-10!173;UBERON:0000477!6.03e-10!286;UBERON:0002298!2.01e-09!8;UBERON:0000483!6.22e-09!309;UBERON:0000468!7.80e-09!659;UBERON:0000119!1.19e-08!312;UBERON:0000467!6.46e-08!625;UBERON:0000480!7.55e-08!626;UBERON:0003076!8.15e-08!15;UBERON:0003057!8.15e-08!15;UBERON:0000064!1.01e-07!219;UBERON:0002308!1.17e-07!9;UBERON:0000125!1.17e-07!9;UBERON:0000200!1.26e-07!6;UBERON:0000479!4.21e-07!787 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.72e-17;114!UBERON:0003978;2.84e-10;3!UBERON:0000946;2.84e-10;3!UBERON:0002133;2.12e-07;2!UBERON:0005090;2.23e-07;2!UBERON:0001630;2.23e-07;2!UBERON:0003296;2.59e-07;4!UBERON:0010133;2.59e-07;4!UBERON:0002780;5.61e-07;41!UBERON:0001890;5.61e-07;41!UBERON:0007100;7.10e-07;25!UBERON:0000341;9.57e-07;2!UBERON:0000007;9.57e-07;2!UBERON:0001873;9.57e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.58e-64,114;UBERON:0003978,2.61e-10,3;UBERON:0009751,2.61e-10,3;UBERON:0000946,2.61e-10,3;UBERON:0002523,2.61e-10,3;UBERON:0005983,2.61e-10,3;UBERON:0002165,2.61e-10,3;UBERON:0002062,2.61e-10,3;UBERON:0007280,2.61e-10,3;UBERON:0000073,1.80e-08,53;UBERON:0002616,1.80e-08,53;UBERON:0003103,5.16e-08,68;UBERON:0001049,7.41e-08,56;UBERON:0005068,7.41e-08,56;UBERON:0006241,7.41e-08,56;UBERON:0007135,7.41e-08,56;UBERON:0000955,8.43e-08,68;UBERON:0006238,8.43e-08,68;UBERON:0005090,1.76e-07,2;UBERON:0001630,1.76e-07,2;UBERON:0002133,2.34e-07,2;UBERON:0002780,2.72e-07,41;UBERON:0001890,2.72e-07,41;UBERON:0003080,2.72e-07,41;UBERON:0006240,2.72e-07,41;UBERON:0003296,3.62e-07,4;UBERON:0010133,3.62e-07,4;UBERON:0003075,4.62e-07,82;UBERON:0007284,4.62e-07,82;UBERON:0000341,5.75e-07,2;UBERON:0001017,6.31e-07,81 | |||
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|short_description=p10@FXYD1 | |||
}} |
Revision as of 20:06, 11 September 2013
Short description: | p10@FXYD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_FXYD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_AB463657, BC032800, EU176238, EU176531_5end |
EntrezGene: | FXYD1 |
HGNC: | 4025 |
UniProt: | O00168 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 6.58e-64 | 114 |
valve | 2.61e-10 | 3 |
cardiac mesenchyme | 2.61e-10 | 3 |
cardial valve | 2.61e-10 | 3 |
tunica intima | 2.61e-10 | 3 |
heart layer | 2.61e-10 | 3 |
endocardium | 2.61e-10 | 3 |
endocardial cushion | 2.61e-10 | 3 |
presumptive endocardium | 2.61e-10 | 3 |
regional part of nervous system | 1.80e-08 | 53 |
regional part of brain | 1.80e-08 | 53 |
compound organ | 5.16e-08 | 68 |
neural tube | 7.41e-08 | 56 |
neural rod | 7.41e-08 | 56 |
future spinal cord | 7.41e-08 | 56 |
neural keel | 7.41e-08 | 56 |
brain | 8.43e-08 | 68 |
future brain | 8.43e-08 | 68 |
muscle structure | 1.76e-07 | 2 |
muscle organ | 1.76e-07 | 2 |
atrioventricular valve | 2.34e-07 | 2 |
regional part of forebrain | 2.72e-07 | 41 |
forebrain | 2.72e-07 | 41 |
anterior neural tube | 2.72e-07 | 41 |
future forebrain | 2.72e-07 | 41 |
gland of diencephalon | 3.62e-07 | 4 |
neuroendocrine gland | 3.62e-07 | 4 |
neural plate | 4.62e-07 | 82 |
presumptive neural plate | 4.62e-07 | 82 |
throat | 5.75e-07 | 2 |
central nervous system | 6.31e-07 | 81 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.71e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.