FFCP PHASE1:Hg19::chr19:12902998..12903011,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:12902998..12903011,-|id=chr19:12902998..12903011,-|ontology_enrichment_celltype=CL:0002087!2.64e-11!119;CL:0002031!6.09e-11!124;CL:0000738!1.03e-10!140;CL:0000037!1.84e-10!172;CL:0000566!1.84e-10!172;CL:0002057!2.20e-10!42;CL:0000988!3.61e-10!182;CL:0000557!7.33e-10!71;CL:0002032!7.66e-10!165;CL:0000837!7.66e-10!165;CL:0000839!2.90e-09!70;CL:0000860!4.03e-09!45;CL:0002009!5.22e-09!65;CL:0000766!7.05e-09!76;CL:0002194!1.04e-08!63;CL:0000576!1.04e-08!63;CL:0000040!1.04e-08!63;CL:0000559!1.04e-08!63;CL:0000763!5.68e-08!112;CL:0000049!5.68e-08!112;CL:0002320!5.21e-07!365|ontology_enrichment_celltype_v019=CL:0000084;1.46e-12;25!CL:0000235;7.33e-09;6!CL:0000624;1.21e-08;6!CL:0000542;3.17e-08;53!CL:0000226;3.42e-08;3!CL:0000842;3.42e-08;3!CL:0000791;2.78e-07;18!CL:0000789;2.78e-07;18!CL:0002419;2.78e-07;18|ontology_enrichment_celltype_v019_2=CL:0000738,3.29e-17,136;CL:0002031,1.68e-16,120;CL:0002087,1.13e-15,115;CL:0000037,5.81e-13,168;CL:0000084,1.14e-12,25;CL:0000827,1.14e-12,25;CL:0000838,2.67e-12,52;CL:0000988,4.81e-12,177;CL:0000542,5.05e-12,53;CL:0000051,5.05e-12,53;CL:0002032,4.13e-11,161;CL:0000837,4.13e-11,161;CL:0000235,6.80e-09,6;CL:0000624,9.59e-09,6;CL:0000226,4.40e-08,3;CL:0000842,4.40e-08,3;CL:0000791,2.34e-07,18;CL:0000789,2.34e-07,18;CL:0002420,2.34e-07,18;CL:0002419,2.34e-07,18;CL:0000790,2.34e-07,18|ontology_enrichment_development_v019=CL:0000051;3.17e-08;53!CL:0000790;2.78e-07;18!UBERON:0003099;4.08e-07;1!UBERON:0003852;4.08e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:0060060,7.60e-07,1;DOID:0060061,7.60e-07,1;DOID:8691,7.60e-07,1|ontology_enrichment_uberon=UBERON:0002371!1.25e-08!80;UBERON:0001474!1.84e-08!86;UBERON:0002390!2.01e-07!102;UBERON:0003061!2.01e-07!102;UBERON:0002193!5.65e-07!112|ontology_enrichment_uberon_v019=UBERON:0005705;4.08e-07;1!UBERON:0008193;4.08e-07;1!UBERON:0010912;4.08e-07;1!UBERON:0002514;4.08e-07;1!UBERON:0003457;4.08e-07;1!UBERON:0008907;4.08e-07;1!UBERON:0008001;4.08e-07;1!UBERON:0007213;4.08e-07;1!UBERON:0009891;4.08e-07;1!UBERON:0007914;4.08e-07;1!UBERON:0007375;4.08e-07;1!UBERON:0003323;4.08e-07;1!UBERON:0010258;4.08e-07;1!UBERON:0005253;4.08e-07;1!UBERON:0007842;4.08e-07;1!UBERON:0002397;4.08e-07;1!UBERON:0003113;4.08e-07;1!UBERON:0003277;4.08e-07;1!UBERON:0001709;4.08e-07;1!UBERON:0002244;4.08e-07;1!UBERON:0005620;4.08e-07;1!UBERON:0010364;4.08e-07;1!UBERON:0004288;4.08e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0005705,4.09e-07,1;UBERON:0008193,4.09e-07,1;UBERON:0010912,4.09e-07,1;UBERON:0002514,4.09e-07,1;UBERON:0003457,4.09e-07,1;UBERON:0008907,4.09e-07,1;UBERON:0008001,4.09e-07,1;UBERON:0007213,4.09e-07,1;UBERON:0009891,4.09e-07,1;UBERON:0007914,4.09e-07,1;UBERON:0009292,4.09e-07,1;UBERON:0003099,4.09e-07,1;UBERON:0007375,4.09e-07,1;UBERON:0003323,4.09e-07,1;UBERON:0010258,4.09e-07,1;UBERON:0007842,4.09e-07,1;UBERON:0009494,4.09e-07,1;UBERON:0010042,4.09e-07,1;UBERON:0010045,4.09e-07,1;UBERON:0010259,4.09e-07,1;UBERON:0010359,4.09e-07,1;UBERON:0009526,4.09e-07,1;UBERON:0002397,4.09e-07,1;UBERON:0003113,4.09e-07,1;UBERON:0003277,4.09e-07,1;UBERON:0001709,4.09e-07,1;UBERON:0004066,4.09e-07,1;UBERON:0002244,4.09e-07,1;UBERON:0005620,4.09e-07,1;UBERON:0004362,4.09e-07,1;UBERON:0010364,4.09e-07,1;UBERON:0010046,4.09e-07,1;UBERON:0005868,4.09e-07,1;UBERON:0007238,4.09e-07,1;UBERON:0004288,4.09e-07,1;UBERON:0004068,4.09e-07,1;UBERON:0010334,4.09e-07,1;UBERON:0003852,4.09e-07,1;UBERON:0010253,4.09e-07,1|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0,0.263766978228454,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,0,0.383829398097213,0.154816123316076,0,0.30120591877825,0,0,0,0,0,0.601633342410425,1.95309783644267,0,0,0,0.872389432677388,0.377875943688809,0.485168122375632,0.697287110717054,0,0.309706370895104,0.863077176966451,0.256160706529101,0,0.344745680736619,0,0,0.376484679085209,0.818718450173537,0,1.83650335422542,0,1.27867425159808,0.659702600373432,0.598390972864896,0,0.290209238628584,0,0.622822248995575,1.7587406567972,0.521482918420201,0,0,0,0,0.211255286311942,0.212604299965044,0,0.561643155732475,0.450530678524519,0,0.570025487482497,0.19891667719909,0.730656615058536,0,0,0,0,0,0,0,0,1.1384259382189,1.17447437874188,1.52909291250092,0,0,0,0,1.96505381374582,6.16804496998528,0,0,0,0,0,1.17842362989935,0,0,0.25618263945135,0.390178042679635,0.164437904603676,0.276350017785848,0.289803085735052,0.14828656316206,0,2.09071047609954,0,0.383220493601921,0.68725489096526,0.253019692019503,0,0,0,0,0,0,0,0,0.403213486449465,1.33720097891754,2.46201486600758,0,0,0.12786256184353,0,0,0.289693037921647,0,0.973269740605272,0,0,0.263504357079378,0,0,0,0.324547393654683,0,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48812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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:12902998..12903011,- | |||
|id=chr19:12902998..12903011,- | |||
|ontology_enrichment_celltype=CL:0002087!2.64e-11!119;CL:0002031!6.09e-11!124;CL:0000738!1.03e-10!140;CL:0000037!1.84e-10!172;CL:0000566!1.84e-10!172;CL:0002057!2.20e-10!42;CL:0000988!3.61e-10!182;CL:0000557!7.33e-10!71;CL:0002032!7.66e-10!165;CL:0000837!7.66e-10!165;CL:0000839!2.90e-09!70;CL:0000860!4.03e-09!45;CL:0002009!5.22e-09!65;CL:0000766!7.05e-09!76;CL:0002194!1.04e-08!63;CL:0000576!1.04e-08!63;CL:0000040!1.04e-08!63;CL:0000559!1.04e-08!63;CL:0000763!5.68e-08!112;CL:0000049!5.68e-08!112;CL:0002320!5.21e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000084;1.46e-12;25!CL:0000235;7.33e-09;6!CL:0000624;1.21e-08;6!CL:0000542;3.17e-08;53!CL:0000226;3.42e-08;3!CL:0000842;3.42e-08;3!CL:0000791;2.78e-07;18!CL:0000789;2.78e-07;18!CL:0002419;2.78e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.29e-17,136;CL:0002031,1.68e-16,120;CL:0002087,1.13e-15,115;CL:0000037,5.81e-13,168;CL:0000084,1.14e-12,25;CL:0000827,1.14e-12,25;CL:0000838,2.67e-12,52;CL:0000988,4.81e-12,177;CL:0000542,5.05e-12,53;CL:0000051,5.05e-12,53;CL:0002032,4.13e-11,161;CL:0000837,4.13e-11,161;CL:0000235,6.80e-09,6;CL:0000624,9.59e-09,6;CL:0000226,4.40e-08,3;CL:0000842,4.40e-08,3;CL:0000791,2.34e-07,18;CL:0000789,2.34e-07,18;CL:0002420,2.34e-07,18;CL:0002419,2.34e-07,18;CL:0000790,2.34e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000051;3.17e-08;53!CL:0000790;2.78e-07;18!UBERON:0003099;4.08e-07;1!UBERON:0003852;4.08e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,7.60e-07,1;DOID:0060061,7.60e-07,1;DOID:8691,7.60e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.25e-08!80;UBERON:0001474!1.84e-08!86;UBERON:0002390!2.01e-07!102;UBERON:0003061!2.01e-07!102;UBERON:0002193!5.65e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0005705;4.08e-07;1!UBERON:0008193;4.08e-07;1!UBERON:0010912;4.08e-07;1!UBERON:0002514;4.08e-07;1!UBERON:0003457;4.08e-07;1!UBERON:0008907;4.08e-07;1!UBERON:0008001;4.08e-07;1!UBERON:0007213;4.08e-07;1!UBERON:0009891;4.08e-07;1!UBERON:0007914;4.08e-07;1!UBERON:0007375;4.08e-07;1!UBERON:0003323;4.08e-07;1!UBERON:0010258;4.08e-07;1!UBERON:0005253;4.08e-07;1!UBERON:0007842;4.08e-07;1!UBERON:0002397;4.08e-07;1!UBERON:0003113;4.08e-07;1!UBERON:0003277;4.08e-07;1!UBERON:0001709;4.08e-07;1!UBERON:0002244;4.08e-07;1!UBERON:0005620;4.08e-07;1!UBERON:0010364;4.08e-07;1!UBERON:0004288;4.08e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005705,4.09e-07,1;UBERON:0008193,4.09e-07,1;UBERON:0010912,4.09e-07,1;UBERON:0002514,4.09e-07,1;UBERON:0003457,4.09e-07,1;UBERON:0008907,4.09e-07,1;UBERON:0008001,4.09e-07,1;UBERON:0007213,4.09e-07,1;UBERON:0009891,4.09e-07,1;UBERON:0007914,4.09e-07,1;UBERON:0009292,4.09e-07,1;UBERON:0003099,4.09e-07,1;UBERON:0007375,4.09e-07,1;UBERON:0003323,4.09e-07,1;UBERON:0010258,4.09e-07,1;UBERON:0007842,4.09e-07,1;UBERON:0009494,4.09e-07,1;UBERON:0010042,4.09e-07,1;UBERON:0010045,4.09e-07,1;UBERON:0010259,4.09e-07,1;UBERON:0010359,4.09e-07,1;UBERON:0009526,4.09e-07,1;UBERON:0002397,4.09e-07,1;UBERON:0003113,4.09e-07,1;UBERON:0003277,4.09e-07,1;UBERON:0001709,4.09e-07,1;UBERON:0004066,4.09e-07,1;UBERON:0002244,4.09e-07,1;UBERON:0005620,4.09e-07,1;UBERON:0004362,4.09e-07,1;UBERON:0010364,4.09e-07,1;UBERON:0010046,4.09e-07,1;UBERON:0005868,4.09e-07,1;UBERON:0007238,4.09e-07,1;UBERON:0004288,4.09e-07,1;UBERON:0004068,4.09e-07,1;UBERON:0010334,4.09e-07,1;UBERON:0003852,4.09e-07,1;UBERON:0010253,4.09e-07,1 | |||
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| |||
|short_description=p@chr19:12902998..12903011,- | |||
}} |
Revision as of 18:49, 11 September 2013
Short description: | p@chr19:12902998..12903011, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:12902998..12903011, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 3.29e-17 | 136 |
hematopoietic lineage restricted progenitor cell | 1.68e-16 | 120 |
nongranular leukocyte | 1.13e-15 | 115 |
hematopoietic stem cell | 5.81e-13 | 168 |
T cell | 1.14e-12 | 25 |
pro-T cell | 1.14e-12 | 25 |
lymphoid lineage restricted progenitor cell | 2.67e-12 | 52 |
hematopoietic cell | 4.81e-12 | 177 |
lymphocyte | 5.05e-12 | 53 |
common lymphoid progenitor | 5.05e-12 | 53 |
hematopoietic oligopotent progenitor cell | 4.13e-11 | 161 |
hematopoietic multipotent progenitor cell | 4.13e-11 | 161 |
macrophage | 6.80e-09 | 6 |
CD4-positive, alpha-beta T cell | 9.59e-09 | 6 |
single nucleate cell | 4.40e-08 | 3 |
mononuclear cell | 4.40e-08 | 3 |
mature alpha-beta T cell | 2.34e-07 | 18 |
alpha-beta T cell | 2.34e-07 | 18 |
immature T cell | 2.34e-07 | 18 |
mature T cell | 2.34e-07 | 18 |
immature alpha-beta T cell | 2.34e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 7.60e-07 | 1 |
cutaneous T cell lymphoma | 7.60e-07 | 1 |
mycosis fungoides | 7.60e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.