FFCP PHASE1:Hg19::chr19:1940913..1940932,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1455|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2455|TSSclassifier=W|UniProt=P78368|association_with_transcript=-228bp_to_ENST00000255641,NM_001319,uc002lul.3_5end|description=CAGE_peak_3_at_CSNK1G2_5end|id=chr19:1940913..1940932,+|ontology_enrichment_celltype=CL:0002371!3.70e-17!591;CL:0000144!1.15e-13!625;CL:0002057!5.15e-11!42;CL:0000548!6.74e-11!679;CL:0000004!6.74e-11!679;CL:0000255!6.74e-11!679;CL:0000012!1.39e-10!682;CL:0000860!4.76e-10!45;CL:0000766!2.52e-08!76;CL:0000063!3.07e-08!578;CL:0002320!4.41e-08!365;CL:0000219!5.38e-08!390;CL:0000003!5.44e-08!722;CL:0000557!6.66e-08!71;CL:0000723!6.88e-08!436;CL:0002009!9.24e-08!65;CL:0000034!1.71e-07!444;CL:0000048!1.82e-07!430;CL:0000134!3.05e-07!358;CL:0002194!4.76e-07!63;CL:0000576!4.76e-07!63;CL:0000040!4.76e-07!63;CL:0000559!4.76e-07!63|ontology_enrichment_celltype_v019=CL:0000860;9.80e-18;33!CL:0002057;9.80e-18;33!CL:0000473;8.56e-15;39!CL:0000234;8.56e-15;39!CL:0000775;6.46e-10;3!CL:0000094;2.55e-09;8!CL:0000766;1.24e-08;69!CL:0000576;1.29e-08;48!CL:0000669;3.13e-07;4!CL:1000746;3.24e-07;7!CL:1000612;3.24e-07;7!CL:0000650;6.92e-07;2!CL:1000500;6.92e-07;2!CL:1000618;6.92e-07;2!CL:1001318;6.92e-07;2!CL:0002173;6.92e-07;2|ontology_enrichment_celltype_v019_2=CL:0000860,1.12e-16,42;CL:0002057,1.12e-16,42;CL:0000766,5.99e-16,72;CL:0000473,8.15e-16,48;CL:0000234,8.15e-16,48;CL:0002009,1.15e-12,61;CL:0000557,1.50e-12,67;CL:0000763,7.03e-12,108;CL:0000049,7.03e-12,108;CL:0002194,9.33e-12,59;CL:0000576,9.33e-12,59;CL:0000040,9.33e-12,59;CL:0000559,9.33e-12,59;CL:0000775,3.11e-10,3;CL:0000839,4.48e-10,66;CL:0000094,1.44e-09,8;CL:0000988,3.43e-08,177;CL:0000738,3.67e-08,136;CL:0000669,4.95e-07,4;CL:1000746,6.68e-07,7;CL:1000612,6.68e-07,7;CL:0000081,7.50e-07,11;CL:0000037,8.36e-07,168|ontology_enrichment_development_v019=CL:0002057;1.16e-11;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003081!1.18e-09!216;UBERON:0002384!2.45e-07!375;UBERON:0002193!4.06e-07!112;UBERON:0002371!4.76e-07!80;UBERON:0004765!4.76e-07!101;UBERON:0001434!4.76e-07!101|ontology_enrichment_uberon_v019=UBERON:0000074;3.24e-07;7!UBERON:0001229;3.24e-07;7!UBERON:0003567;6.92e-07;2!UBERON:0003838;6.92e-07;2!UBERON:0003586;6.92e-07;2!UBERON:0005169;6.92e-07;2!UBERON:0002321;6.92e-07;2!UBERON:0005215;6.92e-07;2!UBERON:0002303;6.92e-07;2!UBERON:0002319;6.92e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.76e-12,76;UBERON:0002405,4.72e-11,93;UBERON:0001474,1.31e-10,82;UBERON:0003081,5.66e-10,203;UBERON:0002193,1.03e-09,108;UBERON:0004765,3.09e-09,90;UBERON:0002390,4.92e-09,98;UBERON:0003061,4.92e-09,98;UBERON:0001434,7.70e-08,100;UBERON:0010532,6.68e-07,7;UBERON:0000074,6.68e-07,7;UBERON:0001229,6.68e-07,7;UBERON:0001230,6.68e-07,7;UBERON:0003220,6.68e-07,7;UBERON:0005749,6.68e-07,7;UBERON:0004199,6.68e-07,7;UBERON:0004209,6.68e-07,7;UBERON:0004198,6.68e-07,7|phase1_expression=0.181678379270557,0.428201047781966,0.281908808191942,0,0,1.74467704820074,0,0.631719873426831,0.261185628199839,0.491467873003018,0,1.09220686065086,0.791300934685361,0.618831764800233,0.662794751455832,0,0,0,0,0.369363174230364,1.02000345622126,0.940364164434263,0.286235987131057,0.410623275218653,0.376627918784408,0.152826811495903,0.0821005894499457,0.0787107813136792,1.18009283054671,0,0.619264493264304,0,0.30120591877825,0.739508020333575,0.154934401160603,0.284338464974843,0.880801318004542,0,1.20326668482085,0.651032612147555,0,0.32389366601898,0.257575567634187,0.872389432677388,0.377875943688809,0.242584061187816,1.85943229524548,1.23350366406548,0.309706370895104,0.863077176966451,0.768482119587302,0,1.03423704220986,1.29096936716765,0,2.25890807451126,1.36453075028923,1.12361742222542,3.06083892370903,2.24650318953266,5.11469700639233,0.989553900560148,0.398927315243264,1.27867425159808,1.16083695451434,0,1.24564449799115,1.00499466102697,1.0429658368404,0.868755378820466,1.81619850790011,0.736555271975129,0.632924774881769,0.211255286311942,0.212604299965044,0.628975936525128,0.22465726229299,0.750884464207532,0.32145117339416,0.285012743741249,0,0.365328307529268,0,0,0,0,0,0,0.661044872784862,0,1.1384259382189,0.587237189370939,0.382273228125229,0,0,0.263384084775077,0.196709770113833,0.393010762749165,0.205601498999509,0,0.977766799900771,0,0,0,0.294605907474837,0,0.270803863765016,0.128091319725675,0.390178042679635,0.164437904603676,0,0.289803085735052,0.14828656316206,0,0,0.226618685395132,0,0.34362744548263,0.759059076058509,0.318565414324097,0.651083453856419,0,0,0,0,0,0,0.604820229674197,0.267440195783507,0.144824403882799,0,1.34140171940727,0.383587685530591,0,0,0.434539556882471,0,0,0.472674085820339,0,0.702678285545008,2.03017567021455,0.728590576585084,0.370784442784429,0,0.174129737299267,0,0.238490624305342,0,0,0.993812036833525,0,1.38856200643038,1.13061588384802,0.419499436209906,0.825354125820202,0.417989933073621,0.5168335183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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1455 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2455 | |||
|TSSclassifier=W | |||
|UniProt=P78368 | |||
|association_with_transcript=-228bp_to_ENST00000255641,NM_001319,uc002lul.3_5end | |||
|description=CAGE_peak_3_at_CSNK1G2_5end | |||
|id=chr19:1940913..1940932,+ | |||
|ontology_enrichment_celltype=CL:0002371!3.70e-17!591;CL:0000144!1.15e-13!625;CL:0002057!5.15e-11!42;CL:0000548!6.74e-11!679;CL:0000004!6.74e-11!679;CL:0000255!6.74e-11!679;CL:0000012!1.39e-10!682;CL:0000860!4.76e-10!45;CL:0000766!2.52e-08!76;CL:0000063!3.07e-08!578;CL:0002320!4.41e-08!365;CL:0000219!5.38e-08!390;CL:0000003!5.44e-08!722;CL:0000557!6.66e-08!71;CL:0000723!6.88e-08!436;CL:0002009!9.24e-08!65;CL:0000034!1.71e-07!444;CL:0000048!1.82e-07!430;CL:0000134!3.05e-07!358;CL:0002194!4.76e-07!63;CL:0000576!4.76e-07!63;CL:0000040!4.76e-07!63;CL:0000559!4.76e-07!63 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.80e-18;33!CL:0002057;9.80e-18;33!CL:0000473;8.56e-15;39!CL:0000234;8.56e-15;39!CL:0000775;6.46e-10;3!CL:0000094;2.55e-09;8!CL:0000766;1.24e-08;69!CL:0000576;1.29e-08;48!CL:0000669;3.13e-07;4!CL:1000746;3.24e-07;7!CL:1000612;3.24e-07;7!CL:0000650;6.92e-07;2!CL:1000500;6.92e-07;2!CL:1000618;6.92e-07;2!CL:1001318;6.92e-07;2!CL:0002173;6.92e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.12e-16,42;CL:0002057,1.12e-16,42;CL:0000766,5.99e-16,72;CL:0000473,8.15e-16,48;CL:0000234,8.15e-16,48;CL:0002009,1.15e-12,61;CL:0000557,1.50e-12,67;CL:0000763,7.03e-12,108;CL:0000049,7.03e-12,108;CL:0002194,9.33e-12,59;CL:0000576,9.33e-12,59;CL:0000040,9.33e-12,59;CL:0000559,9.33e-12,59;CL:0000775,3.11e-10,3;CL:0000839,4.48e-10,66;CL:0000094,1.44e-09,8;CL:0000988,3.43e-08,177;CL:0000738,3.67e-08,136;CL:0000669,4.95e-07,4;CL:1000746,6.68e-07,7;CL:1000612,6.68e-07,7;CL:0000081,7.50e-07,11;CL:0000037,8.36e-07,168 | |||
|ontology_enrichment_development_v019=CL:0002057;1.16e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.18e-09!216;UBERON:0002384!2.45e-07!375;UBERON:0002193!4.06e-07!112;UBERON:0002371!4.76e-07!80;UBERON:0004765!4.76e-07!101;UBERON:0001434!4.76e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000074;3.24e-07;7!UBERON:0001229;3.24e-07;7!UBERON:0003567;6.92e-07;2!UBERON:0003838;6.92e-07;2!UBERON:0003586;6.92e-07;2!UBERON:0005169;6.92e-07;2!UBERON:0002321;6.92e-07;2!UBERON:0005215;6.92e-07;2!UBERON:0002303;6.92e-07;2!UBERON:0002319;6.92e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.76e-12,76;UBERON:0002405,4.72e-11,93;UBERON:0001474,1.31e-10,82;UBERON:0003081,5.66e-10,203;UBERON:0002193,1.03e-09,108;UBERON:0004765,3.09e-09,90;UBERON:0002390,4.92e-09,98;UBERON:0003061,4.92e-09,98;UBERON:0001434,7.70e-08,100;UBERON:0010532,6.68e-07,7;UBERON:0000074,6.68e-07,7;UBERON:0001229,6.68e-07,7;UBERON:0001230,6.68e-07,7;UBERON:0003220,6.68e-07,7;UBERON:0005749,6.68e-07,7;UBERON:0004199,6.68e-07,7;UBERON:0004209,6.68e-07,7;UBERON:0004198,6.68e-07,7 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.281908808191942,0,0,1.74467704820074,0,0.631719873426831,0.261185628199839,0.491467873003018,0,1.09220686065086,0.791300934685361,0.618831764800233,0.662794751455832,0,0,0,0,0.369363174230364,1.02000345622126,0.940364164434263,0.286235987131057,0.410623275218653,0.376627918784408,0.152826811495903,0.0821005894499457,0.0787107813136792,1.18009283054671,0,0.619264493264304,0,0.30120591877825,0.739508020333575,0.154934401160603,0.284338464974843,0.880801318004542,0,1.20326668482085,0.651032612147555,0,0.32389366601898,0.257575567634187,0.872389432677388,0.377875943688809,0.242584061187816,1.85943229524548,1.23350366406548,0.309706370895104,0.863077176966451,0.768482119587302,0,1.03423704220986,1.29096936716765,0,2.25890807451126,1.36453075028923,1.12361742222542,3.06083892370903,2.24650318953266,5.11469700639233,0.989553900560148,0.398927315243264,1.27867425159808,1.16083695451434,0,1.24564449799115,1.00499466102697,1.0429658368404,0.868755378820466,1.81619850790011,0.736555271975129,0.632924774881769,0.211255286311942,0.212604299965044,0.628975936525128,0.22465726229299,0.750884464207532,0.32145117339416,0.285012743741249,0,0.365328307529268,0,0,0,0,0,0,0.661044872784862,0,1.1384259382189,0.587237189370939,0.382273228125229,0,0,0.263384084775077,0.196709770113833,0.393010762749165,0.205601498999509,0,0.977766799900771,0,0,0,0.294605907474837,0,0.270803863765016,0.128091319725675,0.390178042679635,0.164437904603676,0,0.289803085735052,0.14828656316206,0,0,0.226618685395132,0,0.34362744548263,0.759059076058509,0.318565414324097,0.651083453856419,0,0,0,0,0,0,0.604820229674197,0.267440195783507,0.144824403882799,0,1.34140171940727,0.383587685530591,0,0,0.434539556882471,0,0,0.472674085820339,0,0.702678285545008,2.03017567021455,0.728590576585084,0.370784442784429,0,0.174129737299267,0,0.238490624305342,0,0,0.993812036833525,0,1.38856200643038,1.13061588384802,0.419499436209906,0.825354125820202,0.417989933073621,0.516833518338658,0,0.66944122552934,0.805658634218294,0.760272105718513,2.19655851793353,0.367663080345869,0,0.535798369704479,1.12264686313085,0.675668882899933,1.53316637465883,0,0.366403487860815,1.31780417436063,0,1.3082821564276,0,0.25326102332916,0.132409180813219,0.286836620748814,0,0,0,0.24666754841716,0.311211035399766,0.808264032418128,0.326923806226917,0.454072282934794,0.576175924479999,0.468642863667593,0.624320153660641,0,0.298897361103602,0.23486899728753,0,0,0.408308342509787,0.245668634623536,0.516628905878827,1.18800285728205,0.494533858557114,0,2.15585442544872,0.168336113954066,0.250237039743928,0.831192346452549,0,0.30648779579902,0.300476117813194,0.680593098960126,0.179389635688862,0.213557388818567,0.423863802319124,0.600182192168805,0.309157587715317,0.257640540045629,0.37223371266318,0.337552664482532,0.292311015483596,1.26216887122057,0.552299391853796,0.161646056818812,0.355009592516614,0.10075209822764,0.339121184620975,0,0.272746120590835,0,0.121973706129595,0,0.116193942869518,0.10366105501537,0.504641701751257,0.36497735907583,1.56449532329816,0,0,0,0.721879481669586,0.236613600079688,0.337169380156203,0,0,0.653638332277218,0.474541238222193,0.134831308160164,0.196221465125346,0,0,1.40241773803446,0.4115740113314,0,0,0,0,0.441463099414651,0,0,0.329250856225877,1.1240175325762,0.301586917234893,0.370353780634118,0,0,0,0.115930404975077,0.117408694235822,1.29929802984966,0.462985512576611,0.190254152234598,0,0,0.246217006087397,0,0,0,0.16798212819886,0.141775097242386,0,0.290633938513962,0.766765358330422,0.492663237895943,0.264145302039678,0,0.288239906833923,0.12624243342638,0.190493682876507,0.763976851116555,1.17217447210047,0,0.411309970813294,0,1.14330573052231,0.560655421726804,0.43596006883328,0.36669142910475,0.129271715757778,10.7296933755565,0.845302752556,0.797814349754612,0,0,1.41849132023278,0.532844358032199,0.428933980974443,0.542621605391443,0.823240336780769,0.65147236858747,0.355391948742546,0,0,0,0.799783929456456,0,1.00451418286425,0,0.239624855491583,0,0,0.144781306667579,0.410952645100767,0,0.112085143993527,0.394061520403854,0,0.641715181398742,0,0,0,0.167516265334349,0,1.49801404789436,2.99161459204025,1.24324654030811,0.36807447515742,0,0.271265023699736,0.623912584592421,0.535286966391485,0.473107245101804,0.468565659970853,0,0,0,0,0.368738337083406,0.347534457872331,1.56640925970192,0.686286847621712,0.206768026122887,0.215714200818617,1.06727557803444,0.303127571446259,0,0.604780586659361,0.992431231275107,0.153461973288062,0,0.384417447767103,0.511707249066704,0.321707842287215,0,0.308419387605311,0.532685175939381,0.246381468041427,0.519254429183621,0,0,0.40101294060657,0,0.34444334449382,0.546273504020151,0.393373244878272,0.451199612907412,0.15403067420883,1.56869953835371,1.46139224653261,0.211103257785751,0,1.19065593693561,0.215915916102139,7.71136263451447,1.08378575017541,1.00337954770971,0.509752546090077,0,0.895499018888713,0,0.261435451024901,0.512900250232778,0.656029291399411,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| |||
|short_description=p3@CSNK1G2 | |||
}} |
Revision as of 19:35, 11 September 2013
Short description: | p3@CSNK1G2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_CSNK1G2_5end |
Coexpression cluster: | NA |
Association with transcript: | -228bp_to_ENST00000255641, NM_001319, uc002lul.3_5end |
EntrezGene: | CSNK1G2 |
HGNC: | 2455 |
UniProt: | P78368 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.12e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.12e-16 | 42 |
myeloid leukocyte | 5.99e-16 | 72 |
defensive cell | 8.15e-16 | 48 |
phagocyte | 8.15e-16 | 48 |
macrophage dendritic cell progenitor | 1.15e-12 | 61 |
granulocyte monocyte progenitor cell | 1.50e-12 | 67 |
myeloid cell | 7.03e-12 | 108 |
common myeloid progenitor | 7.03e-12 | 108 |
monopoietic cell | 9.33e-12 | 59 |
monocyte | 9.33e-12 | 59 |
monoblast | 9.33e-12 | 59 |
promonocyte | 9.33e-12 | 59 |
neutrophil | 3.11e-10 | 3 |
myeloid lineage restricted progenitor cell | 4.48e-10 | 66 |
granulocyte | 1.44e-09 | 8 |
hematopoietic cell | 3.43e-08 | 177 |
leukocyte | 3.67e-08 | 136 |
pericyte cell | 4.95e-07 | 4 |
glomerular cell | 6.68e-07 | 7 |
kidney corpuscule cell | 6.68e-07 | 7 |
blood cell | 7.50e-07 | 11 |
hematopoietic stem cell | 8.36e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.76e-12 | 76 |
immune system | 4.72e-11 | 93 |
bone element | 1.31e-10 | 82 |
lateral plate mesoderm | 5.66e-10 | 203 |
hemolymphoid system | 1.03e-09 | 108 |
skeletal element | 3.09e-09 | 90 |
hematopoietic system | 4.92e-09 | 98 |
blood island | 4.92e-09 | 98 |
skeletal system | 7.70e-08 | 100 |
primitive nephron | 6.68e-07 | 7 |
renal glomerulus | 6.68e-07 | 7 |
renal corpuscle | 6.68e-07 | 7 |
glomerular capsule | 6.68e-07 | 7 |
metanephric mesenchyme | 6.68e-07 | 7 |
glomerular tuft | 6.68e-07 | 7 |
S-shaped body | 6.68e-07 | 7 |
renal vesicle | 6.68e-07 | 7 |
comma-shaped body | 6.68e-07 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.