FFCP PHASE1:Hg19::chr19:929027..929051,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1820|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3031|TSSclassifier=N|UniProt=Q99856|association_with_transcript=-277bp_to_AY152547,U88047_5end|coexpression_cluster_id=C159|description=CAGE_peak_4_at_ARID3A_5end|id=chr19:929027..929051,+|ontology_enrichment_celltype=CL:0000039!3.68e-20!7;CL:0000586!3.68e-20!7;CL:0002541!3.97e-13!3|ontology_enrichment_celltype_v019=CL:0002541;3.26e-38;3!CL:0000039;7.53e-17;7!CL:0000586;7.53e-17;7!CL:0000349;7.63e-11;19|ontology_enrichment_celltype_v019_2=CL:0002541,3.06e-38,3;CL:0000039,6.76e-17,7;CL:0000586,6.76e-17,7;CL:0000349,7.63e-11,19|ontology_enrichment_development_v019=UBERON:0003124;5.85e-14;1!UBERON:0000358;1.18e-13;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:1799;4.25e-14;1!DOID:10165;4.25e-14;1!DOID:1798;4.25e-14;1|ontology_enrichment_disease_v019_2=DOID:1799,4.53e-14,1;DOID:10165,4.53e-14,1;DOID:1798,4.53e-14,1|ontology_enrichment_uberon=UBERON:0005631!4.26e-17!14;UBERON:0000158!4.26e-17!14;UBERON:0003124!1.63e-14!7;UBERON:0000476!3.97e-13!3;UBERON:0000920!3.97e-13!3;UBERON:0000473!3.76e-12!8;UBERON:0000478!6.72e-12!24;UBERON:0003135!9.64e-09!11|ontology_enrichment_uberon_v019=UBERON:0003124;3.26e-38;3!UBERON:0000920;3.26e-38;3!UBERON:0005631;2.42e-20;10!UBERON:0000158;2.42e-20;10!UBERON:0000478;1.93e-18;24!UBERON:0000473;4.02e-07;8|ontology_enrichment_uberon_v019_2=UBERON:0000920,3.06e-38,3;UBERON:0003124,5.50e-29,7;UBERON:0005631,2.31e-22,14;UBERON:0000158,2.31e-22,14;UBERON:0000478,1.96e-18,24;UBERON:0000473,4.15e-07,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0.242584061187816,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39783335439818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851363990735132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604780586659361,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33953315142039,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41215701165169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0.223676107892416,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,3.34242278632766,0.593929361665277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,53.721389722418,17.5027406599056,2.60753692612819,18.1830661047194,2.38153742844842,16.5240780565777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57732412567589,0,0,0,0,0,0,0,0,0,0.236349546921671,0.164831716762333,0.337017719270924,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.0239351412925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.32214220975833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,4.80831033108706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0.509944148709909,0.26721740526556,0.643264296743914,0,2.27336094654718,3.48353369203032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34640942403454,0,0,0,0,0|short_description=p4@ARID3A}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=1820 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3031 | |||
|TSSclassifier=N | |||
|UniProt=Q99856 | |||
|association_with_transcript=-277bp_to_AY152547,U88047_5end | |||
|coexpression_cluster_id=C159 | |||
|description=CAGE_peak_4_at_ARID3A_5end | |||
|id=chr19:929027..929051,+ | |||
|ontology_enrichment_celltype=CL:0000039!3.68e-20!7;CL:0000586!3.68e-20!7;CL:0002541!3.97e-13!3 | |||
|ontology_enrichment_celltype_v019=CL:0002541;3.26e-38;3!CL:0000039;7.53e-17;7!CL:0000586;7.53e-17;7!CL:0000349;7.63e-11;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,3.06e-38,3;CL:0000039,6.76e-17,7;CL:0000586,6.76e-17,7;CL:0000349,7.63e-11,19 | |||
|ontology_enrichment_development_v019=UBERON:0003124;5.85e-14;1!UBERON:0000358;1.18e-13;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1799;4.25e-14;1!DOID:10165;4.25e-14;1!DOID:1798;4.25e-14;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,4.53e-14,1;DOID:10165,4.53e-14,1;DOID:1798,4.53e-14,1 | |||
|ontology_enrichment_uberon=UBERON:0005631!4.26e-17!14;UBERON:0000158!4.26e-17!14;UBERON:0003124!1.63e-14!7;UBERON:0000476!3.97e-13!3;UBERON:0000920!3.97e-13!3;UBERON:0000473!3.76e-12!8;UBERON:0000478!6.72e-12!24;UBERON:0003135!9.64e-09!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;3.26e-38;3!UBERON:0000920;3.26e-38;3!UBERON:0005631;2.42e-20;10!UBERON:0000158;2.42e-20;10!UBERON:0000478;1.93e-18;24!UBERON:0000473;4.02e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,3.06e-38,3;UBERON:0003124,5.50e-29,7;UBERON:0005631,2.31e-22,14;UBERON:0000158,2.31e-22,14;UBERON:0000478,1.96e-18,24;UBERON:0000473,4.15e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0.242584061187816,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39783335439818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851363990735132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604780586659361,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33953315142039,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41215701165169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0.223676107892416,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,3.34242278632766,0.593929361665277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,53.721389722418,17.5027406599056,2.60753692612819,18.1830661047194,2.38153742844842,16.5240780565777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57732412567589,0,0,0,0,0,0,0,0,0,0.236349546921671,0.164831716762333,0.337017719270924,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.0239351412925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.32214220975833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,4.80831033108706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0.509944148709909,0.26721740526556,0.643264296743914,0,2.27336094654718,3.48353369203032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34640942403454,0,0,0,0,0 | |||
|short_description=p4@ARID3A | |||
}} |
Revision as of 23:04, 11 September 2013
Short description: | p4@ARID3A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_ARID3A_5end |
Coexpression cluster: | C159_choriocarcinoma_pancreatic_placenta_chorionic_testicular_bronchioalveolar_seminal |
Association with transcript: | -277bp_to_AY152547, U88047_5end |
EntrezGene: | ARID3A |
HGNC: | 3031 |
UniProt: | Q99856 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 3.06e-38 | 3 |
germ line cell | 6.76e-17 | 7 |
germ cell | 6.76e-17 | 7 |
extraembryonic cell | 7.63e-11 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 3.06e-38 | 3 |
chorion | 5.50e-29 | 7 |
extraembryonic membrane | 2.31e-22 | 14 |
membranous layer | 2.31e-22 | 14 |
extraembryonic structure | 1.96e-18 | 24 |
testis | 4.15e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 4.53e-14 | 1 |
endocrine pancreas cancer | 4.53e-14 | 1 |
pancreatic endocrine carcinoma | 4.53e-14 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.