FFCP PHASE1:Hg19::chr18:54339814..54339822,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23335|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=13490|TSSclassifier=S|UniProt=Q9Y4E6,A2RRE0|association_with_transcript=67bp_to_AB384493,AF188125,AY099325,BC131558_5end|coexpression_cluster_id=C357|description=CAGE_peak_7_at_WDR7_5end|id=chr18:54339814..54339822,+|ontology_enrichment_celltype=CL:0005020!5.55e-33!6;CL:0002138!5.55e-33!6;CL:0005022!5.55e-33!6;CL:0002139!8.08e-26!24;CL:0000115!5.89e-24!35;CL:0002078!1.73e-18!44;CL:0002144!1.13e-17!3;CL:0000213!1.21e-13!57;CL:0000215!1.21e-13!57;CL:0000071!1.77e-07!18;CL:0002546!1.77e-07!18|ontology_enrichment_celltype_v019=CL:0002138;1.49e-59;6!CL:0002139;5.55e-27;24!CL:0000115;1.17e-14;36!CL:0002144;1.40e-14;3!CL:0002078;5.99e-12;45!CL:0000213;5.65e-09;58!CL:0000215;5.65e-09;58|ontology_enrichment_celltype_v019_2=CL:0005020,1.22e-59,6;CL:0002138,1.22e-59,6;CL:0005022,1.22e-59,6;CL:0002139,5.19e-27,24;CL:0000115,2.74e-18,36;CL:0002078,8.74e-15,45;CL:0002144,1.40e-14,3;CL:0000213,1.24e-11,58;CL:0000215,1.24e-11,58|ontology_enrichment_development_v019=CL:0005022;1.49e-59;6!UBERON:0004872;6.04e-07;7|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001473!1.32e-24!8;UBERON:0004536!1.32e-24!8;UBERON:0006558!1.32e-24!8;UBERON:0002465!1.43e-19!10;UBERON:0001915!1.13e-17!3;UBERON:0001982!1.13e-17!3;UBERON:0000055!8.54e-11!69;UBERON:0000477!1.40e-10!286;UBERON:0004111!2.31e-10!241;UBERON:0002049!4.32e-09!79;UBERON:0007798!4.32e-09!79;UBERON:0001869!1.02e-08!32;UBERON:0000200!2.71e-08!6;UBERON:0001893!3.72e-08!34;UBERON:0002106!4.10e-08!3;UBERON:0004854!4.10e-08!3;UBERON:0009034!4.10e-08!3;UBERON:0002095!4.10e-08!3;UBERON:0004782!4.10e-08!3;UBERON:0003281!4.10e-08!3;UBERON:0009664!4.10e-08!3;UBERON:0002296!4.10e-08!3;UBERON:0005602!4.10e-08!3;UBERON:0001179!4.10e-08!3;UBERON:0006293!4.10e-08!3;UBERON:0001986!1.77e-07!18;UBERON:0004638!1.77e-07!18;UBERON:0004852!1.77e-07!18;UBERON:0004177!2.37e-07!7;UBERON:0004535!7.86e-07!110;UBERON:0002171!8.03e-07!1;UBERON:0006518!8.03e-07!1;UBERON:0008949!8.03e-07!1;UBERON:0000101!8.03e-07!1;UBERON:0002167!8.03e-07!1|ontology_enrichment_uberon_v019=UBERON:0001473;5.86e-45;8!UBERON:0004536;5.86e-45;8!UBERON:0006558;5.86e-45;8!UBERON:0002465;3.44e-36;10!UBERON:0002405;4.97e-24;27!UBERON:0010523;1.40e-14;3!UBERON:0001915;1.40e-14;3!UBERON:0001982;1.40e-14;3!UBERON:0002106;1.83e-14;3!UBERON:0002193;4.64e-12;42!UBERON:0004177;3.22e-09;5!UBERON:0005057;3.22e-09;5!UBERON:0000055;7.16e-09;65|ontology_enrichment_uberon_v019_2=UBERON:0001473,5.04e-45,8;UBERON:0004536,5.04e-45,8;UBERON:0006558,5.04e-45,8;UBERON:0002465,3.05e-36,10;UBERON:0010523,1.40e-14,3;UBERON:0001915,1.40e-14,3;UBERON:0001982,1.40e-14,3;UBERON:0002106,2.09e-14,3;UBERON:0004854,2.09e-14,3;UBERON:0009034,2.09e-14,3;UBERON:0002095,2.09e-14,3;UBERON:0004782,2.09e-14,3;UBERON:0003281,2.09e-14,3;UBERON:0009664,2.09e-14,3;UBERON:0002296,2.09e-14,3;UBERON:0005602,2.09e-14,3;UBERON:0001179,2.09e-14,3;UBERON:0006293,2.09e-14,3;UBERON:0000055,5.09e-10,68;UBERON:0002049,8.14e-09,78;UBERON:0007798,8.14e-09,78;UBERON:0002405,2.15e-07,93;UBERON:0004177,6.39e-07,7;UBERON:0005057,6.39e-07,7|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0.35576626268671,4.68608857870538,0.805658634218294,0.760272105718513,3.41686880567437,0,0,0.357198913136319,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,1.73239737313289,0.462985512576611,1.33177906564219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23335 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=13490 | |||
|TSSclassifier=S | |||
|UniProt=Q9Y4E6,A2RRE0 | |||
|association_with_transcript=67bp_to_AB384493,AF188125,AY099325,BC131558_5end | |||
|coexpression_cluster_id=C357 | |||
|description=CAGE_peak_7_at_WDR7_5end | |||
|id=chr18:54339814..54339822,+ | |||
|ontology_enrichment_celltype=CL:0005020!5.55e-33!6;CL:0002138!5.55e-33!6;CL:0005022!5.55e-33!6;CL:0002139!8.08e-26!24;CL:0000115!5.89e-24!35;CL:0002078!1.73e-18!44;CL:0002144!1.13e-17!3;CL:0000213!1.21e-13!57;CL:0000215!1.21e-13!57;CL:0000071!1.77e-07!18;CL:0002546!1.77e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0002138;1.49e-59;6!CL:0002139;5.55e-27;24!CL:0000115;1.17e-14;36!CL:0002144;1.40e-14;3!CL:0002078;5.99e-12;45!CL:0000213;5.65e-09;58!CL:0000215;5.65e-09;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,1.22e-59,6;CL:0002138,1.22e-59,6;CL:0005022,1.22e-59,6;CL:0002139,5.19e-27,24;CL:0000115,2.74e-18,36;CL:0002078,8.74e-15,45;CL:0002144,1.40e-14,3;CL:0000213,1.24e-11,58;CL:0000215,1.24e-11,58 | |||
|ontology_enrichment_development_v019=CL:0005022;1.49e-59;6!UBERON:0004872;6.04e-07;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001473!1.32e-24!8;UBERON:0004536!1.32e-24!8;UBERON:0006558!1.32e-24!8;UBERON:0002465!1.43e-19!10;UBERON:0001915!1.13e-17!3;UBERON:0001982!1.13e-17!3;UBERON:0000055!8.54e-11!69;UBERON:0000477!1.40e-10!286;UBERON:0004111!2.31e-10!241;UBERON:0002049!4.32e-09!79;UBERON:0007798!4.32e-09!79;UBERON:0001869!1.02e-08!32;UBERON:0000200!2.71e-08!6;UBERON:0001893!3.72e-08!34;UBERON:0002106!4.10e-08!3;UBERON:0004854!4.10e-08!3;UBERON:0009034!4.10e-08!3;UBERON:0002095!4.10e-08!3;UBERON:0004782!4.10e-08!3;UBERON:0003281!4.10e-08!3;UBERON:0009664!4.10e-08!3;UBERON:0002296!4.10e-08!3;UBERON:0005602!4.10e-08!3;UBERON:0001179!4.10e-08!3;UBERON:0006293!4.10e-08!3;UBERON:0001986!1.77e-07!18;UBERON:0004638!1.77e-07!18;UBERON:0004852!1.77e-07!18;UBERON:0004177!2.37e-07!7;UBERON:0004535!7.86e-07!110;UBERON:0002171!8.03e-07!1;UBERON:0006518!8.03e-07!1;UBERON:0008949!8.03e-07!1;UBERON:0000101!8.03e-07!1;UBERON:0002167!8.03e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001473;5.86e-45;8!UBERON:0004536;5.86e-45;8!UBERON:0006558;5.86e-45;8!UBERON:0002465;3.44e-36;10!UBERON:0002405;4.97e-24;27!UBERON:0010523;1.40e-14;3!UBERON:0001915;1.40e-14;3!UBERON:0001982;1.40e-14;3!UBERON:0002106;1.83e-14;3!UBERON:0002193;4.64e-12;42!UBERON:0004177;3.22e-09;5!UBERON:0005057;3.22e-09;5!UBERON:0000055;7.16e-09;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,5.04e-45,8;UBERON:0004536,5.04e-45,8;UBERON:0006558,5.04e-45,8;UBERON:0002465,3.05e-36,10;UBERON:0010523,1.40e-14,3;UBERON:0001915,1.40e-14,3;UBERON:0001982,1.40e-14,3;UBERON:0002106,2.09e-14,3;UBERON:0004854,2.09e-14,3;UBERON:0009034,2.09e-14,3;UBERON:0002095,2.09e-14,3;UBERON:0004782,2.09e-14,3;UBERON:0003281,2.09e-14,3;UBERON:0009664,2.09e-14,3;UBERON:0002296,2.09e-14,3;UBERON:0005602,2.09e-14,3;UBERON:0001179,2.09e-14,3;UBERON:0006293,2.09e-14,3;UBERON:0000055,5.09e-10,68;UBERON:0002049,8.14e-09,78;UBERON:0007798,8.14e-09,78;UBERON:0002405,2.15e-07,93;UBERON:0004177,6.39e-07,7;UBERON:0005057,6.39e-07,7 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0.35576626268671,4.68608857870538,0.805658634218294,0.760272105718513,3.41686880567437,0,0,0.357198913136319,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,1.73239737313289,0.462985512576611,1.33177906564219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,1.03132620757723,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476128862927481,0,0.124149428591716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p7@WDR7 | |||
}} |
Revision as of 17:47, 11 September 2013
Short description: | p7@WDR7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_WDR7_5end |
Coexpression cluster: | C357_Endothelial_Lymphatic_Renal_Hepatic_seminal_breast_heart |
Association with transcript: | 67bp_to_AB384493, AF188125, AY099325, BC131558_5end |
EntrezGene: | WDR7 |
HGNC: | 13490 |
UniProt: | Q9Y4E6A2RRE0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 1.22e-59 | 6 |
endothelial cell of lymphatic vessel | 1.22e-59 | 6 |
vascular lymphangioblast | 1.22e-59 | 6 |
endothelial cell of vascular tree | 5.19e-27 | 24 |
endothelial cell | 2.74e-18 | 36 |
meso-epithelial cell | 8.74e-15 | 45 |
capillary endothelial cell | 1.40e-14 | 3 |
lining cell | 1.24e-11 | 58 |
barrier cell | 1.24e-11 | 58 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 5.04e-45 | 8 |
lymph vasculature | 5.04e-45 | 8 |
lymphatic part of lymphoid system | 5.04e-45 | 8 |
lymphoid system | 3.05e-36 | 10 |
microcirculatory vessel | 1.40e-14 | 3 |
endothelium of capillary | 1.40e-14 | 3 |
capillary | 1.40e-14 | 3 |
spleen | 2.09e-14 | 3 |
gastrointestinal system mesentery | 2.09e-14 | 3 |
stomach region | 2.09e-14 | 3 |
mesentery | 2.09e-14 | 3 |
gastrointestinal system serosa | 2.09e-14 | 3 |
mesentery of stomach | 2.09e-14 | 3 |
gut mesentery | 2.09e-14 | 3 |
dorsal mesentery | 2.09e-14 | 3 |
dorsal mesogastrium | 2.09e-14 | 3 |
peritoneal cavity | 2.09e-14 | 3 |
spleen primordium | 2.09e-14 | 3 |
vessel | 5.09e-10 | 68 |
vasculature | 8.14e-09 | 78 |
vascular system | 8.14e-09 | 78 |
immune system | 2.15e-07 | 93 |
hemopoietic organ | 6.39e-07 | 7 |
immune organ | 6.39e-07 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.