FFCP PHASE1:Hg19::chr18:13611885..13611899,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=753|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1224|TSSclassifier=S|UniProt=|association_with_transcript=41bp_to_uc002ksg.1_5end|coexpression_cluster_id=C80|description=CAGE_peak_6_at_C18orf1_5end|id=chr18:13611885..13611899,+|ontology_enrichment_celltype=CL:0002057!6.09e-41!42;CL:0000860!2.59e-37!45;CL:0002009!1.73e-26!65;CL:0000557!5.75e-26!71;CL:0002194!4.31e-24!63;CL:0000576!4.31e-24!63;CL:0000040!4.31e-24!63;CL:0000559!4.31e-24!63;CL:0000766!4.28e-23!76;CL:0000763!8.44e-23!112;CL:0000049!8.44e-23!112;CL:0000839!1.28e-21!70;CL:0000037!1.22e-18!172;CL:0000566!1.22e-18!172;CL:0000738!7.86e-18!140;CL:0000988!3.04e-17!182;CL:0002032!1.83e-14!165;CL:0000837!1.83e-14!165;CL:0002087!1.59e-13!119;CL:0002031!7.22e-13!124|ontology_enrichment_celltype_v019=CL:0000860;3.60e-30;33!CL:0002057;3.60e-30;33!CL:0000473;1.09e-21;39!CL:0000234;1.09e-21;39!CL:0000784;2.47e-13;3!CL:0000576;3.28e-13;48!CL:0000766;1.20e-10;69!CL:0001014;2.27e-10;2!CL:0001016;2.27e-10;2!CL:0000451;8.20e-10;10!CL:0000763;4.13e-08;100!CL:0000840;1.91e-07;5|ontology_enrichment_celltype_v019_2=CL:0000860,2.90e-25,42;CL:0002057,2.90e-25,42;CL:0002009,6.19e-23,61;CL:0000557,9.66e-23,67;CL:0000763,5.06e-22,108;CL:0000049,5.06e-22,108;CL:0000473,1.34e-21,48;CL:0000234,1.34e-21,48;CL:0002194,9.55e-19,59;CL:0000576,9.55e-19,59;CL:0000040,9.55e-19,59;CL:0000559,9.55e-19,59;CL:0000766,1.72e-18,72;CL:0000037,5.55e-17,168;CL:0000839,2.43e-16,66;CL:0000988,9.25e-16,177;CL:0000738,6.83e-15,136;CL:0002032,5.57e-14,161;CL:0000837,5.57e-14,161;CL:0000784,2.71e-13,3;CL:0002031,1.20e-10,120;CL:0001014,2.29e-10,2;CL:0001016,2.29e-10,2;CL:0000451,8.55e-10,10;CL:0002087,8.40e-09,115;CL:0000840,1.83e-07,5;CL:0001029,1.83e-07,5|ontology_enrichment_development_v019=CL:0002057;3.27e-21;42!CL:0000049;5.52e-07;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.67e-24!115;UBERON:0002390!9.45e-24!102;UBERON:0003061!9.45e-24!102;UBERON:0001474!1.19e-23!86;UBERON:0001049!5.84e-23!57;UBERON:0005068!5.84e-23!57;UBERON:0006241!5.84e-23!57;UBERON:0007135!5.84e-23!57;UBERON:0002371!1.01e-22!80;UBERON:0002193!4.26e-21!112;UBERON:0004765!2.73e-20!101;UBERON:0001434!2.73e-20!101;UBERON:0002020!1.47e-19!34;UBERON:0003528!1.47e-19!34;UBERON:0001893!1.84e-19!34;UBERON:0002791!1.57e-18!33;UBERON:0002780!3.96e-18!41;UBERON:0001890!3.96e-18!41;UBERON:0006240!3.96e-18!41;UBERON:0002616!1.50e-17!59;UBERON:0003080!1.67e-17!42;UBERON:0001869!5.57e-17!32;UBERON:0002405!1.06e-15!115;UBERON:0001017!4.28e-15!82;UBERON:0000955!2.70e-14!69;UBERON:0006238!2.70e-14!69;UBERON:0003075!4.19e-14!86;UBERON:0007284!4.19e-14!86;UBERON:0005743!7.01e-14!86;UBERON:0002346!5.55e-13!90;UBERON:0002308!1.30e-12!9;UBERON:0000125!1.30e-12!9;UBERON:0000073!1.51e-12!94;UBERON:0001016!1.51e-12!94;UBERON:0002420!2.41e-12!9;UBERON:0007245!2.41e-12!9;UBERON:0010009!2.41e-12!9;UBERON:0010011!2.41e-12!9;UBERON:0000454!2.41e-12!9;UBERON:0002619!3.37e-12!22;UBERON:0001950!6.89e-12!20;UBERON:0000956!2.90e-10!25;UBERON:0000203!2.90e-10!25;UBERON:0009663!5.40e-10!7;UBERON:0003056!1.18e-09!61;UBERON:0002298!3.53e-09!8;UBERON:0002204!5.29e-08!167;UBERON:0000153!7.41e-07!129;UBERON:0007811!7.41e-07!129|ontology_enrichment_uberon_v019=UBERON:0002298;3.61e-11;6!UBERON:0005162;3.55e-10;2!UBERON:0000122;3.55e-10;2!UBERON:0001872;5.91e-08;5!UBERON:0004732;6.63e-08;13|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.74e-19,76;UBERON:0001474,1.03e-17,82;UBERON:0004765,1.03e-15,90;UBERON:0001434,3.46e-15,100;UBERON:0002405,4.73e-15,93;UBERON:0002390,4.85e-14,98;UBERON:0003061,4.85e-14,98;UBERON:0002193,2.67e-12,108;UBERON:0002298,3.35e-11,6;UBERON:0005162,2.99e-10,2;UBERON:0000122,2.99e-10,2;UBERON:0001049,1.81e-09,56;UBERON:0005068,1.81e-09,56;UBERON:0006241,1.81e-09,56;UBERON:0007135,1.81e-09,56;UBERON:0000073,1.48e-08,53;UBERON:0002616,1.48e-08,53;UBERON:0004732,6.36e-08,13;UBERON:0001872,1.31e-07,5;UBERON:0002204,3.88e-07,167;UBERON:0003075,8.40e-07,82;UBERON:0007284,8.40e-07,82|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,1.57345710739562,0.767658796194425,1.39334510984468,0,0,0,0,0,0.293600439334847,0.553995408531877,0.401088894940283,0.651032612147555,0,0,0,0.290796477559129,0.755751887377619,0.242584061187816,1.16214518452842,1.23350366406548,0.929119112685311,0.863077176966451,2.0492856522328,0.945928919554341,1.37898272294647,1.93645405075148,4.06279459783025,0.564727018627814,0.272906150057846,0.674170453335254,0.918251677112708,2.88836124368484,5.11469700639233,0,1.19678194572979,0.426224750532694,1.7412554317715,1.70215567407342,0,1.25624332628372,2.08593167368081,1.95469960234605,1.21079900526674,2.57794345191295,2.53169909952708,0,0.212604299965044,0.209658645508376,0.112328631146495,0.150176892841506,0.16072558669708,0.570025487482497,0.39783335439818,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.790152254325231,0,0.393010762749165,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,2.43317435151318,0,0,0,0.196468613246569,0,0,0,0,0,2.62339686735876,1.71598473234038,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0.710019185033229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6487785964879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.27470839445503,0.495056999523528,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0.284567373393656,0,0,0.5745161103971,0.211673582723883,0.973865820823666,0,1.59764275323235,0,0,0,0,1.41259795033733,0,0,0,0,0,0,0,0,0,1.33228787199128,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0.703347082052564,0,0,0,0,0,0,0,0,0,0,0,1.53471711068062,0.0986434056369336,0,0,0,0.556608588971108,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.723578631752448,0,0,0,0.438770794307945,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0.104421949505455,2.69604531922708,0.802577647298789,0.937057782901357,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0.51595809741485,0,0,0,0,0,0,0,0,0.569797163602908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,2.19048606227189,1.27746588066972,0,0,0,0.229160424011684,0,0,0.429226048136571,0.223171457441873,0,0,0,0,0,0,0,0,0,0.953423842781029,0,0,0,14.398329059296,6.96421759102155,0.364497339948148,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904980694530854,1.98348902614035,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0.122026264901963,0.500763722825999,1.72022758707021,0.554645257684261,1.24192805882767,0,0,0,3.42558400253961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0.194860308839388,0,0,0,0,0,1.9998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578063025868136,0,1.27707087245721,0.82046545696302,0,0.96820153449905,1.29180516505481,7.13847101295772,0,0,0,0,0,0,0.198916222116275,0,0.20170506870352,0,0,0,0,0.472763092328763,0.781078098613847,1.2401207790071,1.14148458349032,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,1.01954599465248,1.05236437700559,0,0,0.078493092850514,0.471346769748006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37415926980462,0.594092800654172,0.4226557275834,0,0.0939839179798536,0,0,0,0,0,0,0,2.15009374727177,0.788857810965923,0.407948941145488,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,1.65492793379032,0.213233981900981,0,0.516711278688049,0.372448285775147,0,0,0,0,0,0.0673520530145875,0.143444410785353,0,0,0,0,0,0,0.122241444182866,0.813792356631477,0,0.201273793591026,0.320568492303233|short_description=p6@C18orf1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=753 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1224 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=41bp_to_uc002ksg.1_5end | |||
|coexpression_cluster_id=C80 | |||
|description=CAGE_peak_6_at_C18orf1_5end | |||
|id=chr18:13611885..13611899,+ | |||
|ontology_enrichment_celltype=CL:0002057!6.09e-41!42;CL:0000860!2.59e-37!45;CL:0002009!1.73e-26!65;CL:0000557!5.75e-26!71;CL:0002194!4.31e-24!63;CL:0000576!4.31e-24!63;CL:0000040!4.31e-24!63;CL:0000559!4.31e-24!63;CL:0000766!4.28e-23!76;CL:0000763!8.44e-23!112;CL:0000049!8.44e-23!112;CL:0000839!1.28e-21!70;CL:0000037!1.22e-18!172;CL:0000566!1.22e-18!172;CL:0000738!7.86e-18!140;CL:0000988!3.04e-17!182;CL:0002032!1.83e-14!165;CL:0000837!1.83e-14!165;CL:0002087!1.59e-13!119;CL:0002031!7.22e-13!124 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.60e-30;33!CL:0002057;3.60e-30;33!CL:0000473;1.09e-21;39!CL:0000234;1.09e-21;39!CL:0000784;2.47e-13;3!CL:0000576;3.28e-13;48!CL:0000766;1.20e-10;69!CL:0001014;2.27e-10;2!CL:0001016;2.27e-10;2!CL:0000451;8.20e-10;10!CL:0000763;4.13e-08;100!CL:0000840;1.91e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.90e-25,42;CL:0002057,2.90e-25,42;CL:0002009,6.19e-23,61;CL:0000557,9.66e-23,67;CL:0000763,5.06e-22,108;CL:0000049,5.06e-22,108;CL:0000473,1.34e-21,48;CL:0000234,1.34e-21,48;CL:0002194,9.55e-19,59;CL:0000576,9.55e-19,59;CL:0000040,9.55e-19,59;CL:0000559,9.55e-19,59;CL:0000766,1.72e-18,72;CL:0000037,5.55e-17,168;CL:0000839,2.43e-16,66;CL:0000988,9.25e-16,177;CL:0000738,6.83e-15,136;CL:0002032,5.57e-14,161;CL:0000837,5.57e-14,161;CL:0000784,2.71e-13,3;CL:0002031,1.20e-10,120;CL:0001014,2.29e-10,2;CL:0001016,2.29e-10,2;CL:0000451,8.55e-10,10;CL:0002087,8.40e-09,115;CL:0000840,1.83e-07,5;CL:0001029,1.83e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;3.27e-21;42!CL:0000049;5.52e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.67e-24!115;UBERON:0002390!9.45e-24!102;UBERON:0003061!9.45e-24!102;UBERON:0001474!1.19e-23!86;UBERON:0001049!5.84e-23!57;UBERON:0005068!5.84e-23!57;UBERON:0006241!5.84e-23!57;UBERON:0007135!5.84e-23!57;UBERON:0002371!1.01e-22!80;UBERON:0002193!4.26e-21!112;UBERON:0004765!2.73e-20!101;UBERON:0001434!2.73e-20!101;UBERON:0002020!1.47e-19!34;UBERON:0003528!1.47e-19!34;UBERON:0001893!1.84e-19!34;UBERON:0002791!1.57e-18!33;UBERON:0002780!3.96e-18!41;UBERON:0001890!3.96e-18!41;UBERON:0006240!3.96e-18!41;UBERON:0002616!1.50e-17!59;UBERON:0003080!1.67e-17!42;UBERON:0001869!5.57e-17!32;UBERON:0002405!1.06e-15!115;UBERON:0001017!4.28e-15!82;UBERON:0000955!2.70e-14!69;UBERON:0006238!2.70e-14!69;UBERON:0003075!4.19e-14!86;UBERON:0007284!4.19e-14!86;UBERON:0005743!7.01e-14!86;UBERON:0002346!5.55e-13!90;UBERON:0002308!1.30e-12!9;UBERON:0000125!1.30e-12!9;UBERON:0000073!1.51e-12!94;UBERON:0001016!1.51e-12!94;UBERON:0002420!2.41e-12!9;UBERON:0007245!2.41e-12!9;UBERON:0010009!2.41e-12!9;UBERON:0010011!2.41e-12!9;UBERON:0000454!2.41e-12!9;UBERON:0002619!3.37e-12!22;UBERON:0001950!6.89e-12!20;UBERON:0000956!2.90e-10!25;UBERON:0000203!2.90e-10!25;UBERON:0009663!5.40e-10!7;UBERON:0003056!1.18e-09!61;UBERON:0002298!3.53e-09!8;UBERON:0002204!5.29e-08!167;UBERON:0000153!7.41e-07!129;UBERON:0007811!7.41e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;3.61e-11;6!UBERON:0005162;3.55e-10;2!UBERON:0000122;3.55e-10;2!UBERON:0001872;5.91e-08;5!UBERON:0004732;6.63e-08;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.74e-19,76;UBERON:0001474,1.03e-17,82;UBERON:0004765,1.03e-15,90;UBERON:0001434,3.46e-15,100;UBERON:0002405,4.73e-15,93;UBERON:0002390,4.85e-14,98;UBERON:0003061,4.85e-14,98;UBERON:0002193,2.67e-12,108;UBERON:0002298,3.35e-11,6;UBERON:0005162,2.99e-10,2;UBERON:0000122,2.99e-10,2;UBERON:0001049,1.81e-09,56;UBERON:0005068,1.81e-09,56;UBERON:0006241,1.81e-09,56;UBERON:0007135,1.81e-09,56;UBERON:0000073,1.48e-08,53;UBERON:0002616,1.48e-08,53;UBERON:0004732,6.36e-08,13;UBERON:0001872,1.31e-07,5;UBERON:0002204,3.88e-07,167;UBERON:0003075,8.40e-07,82;UBERON:0007284,8.40e-07,82 | |||
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|short_description=p6@C18orf1 | |||
}} |
Revision as of 16:56, 11 September 2013
Short description: | p6@C18orf1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_C18orf1_5end |
Coexpression cluster: | C80_immature_migratory_CD14_Dendritic_splenic_cord_Mast |
Association with transcript: | 41bp_to_uc002ksg.1_5end |
EntrezGene: | C18orf1 |
HGNC: | 1224 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.90e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.90e-25 | 42 |
macrophage dendritic cell progenitor | 6.19e-23 | 61 |
granulocyte monocyte progenitor cell | 9.66e-23 | 67 |
myeloid cell | 5.06e-22 | 108 |
common myeloid progenitor | 5.06e-22 | 108 |
defensive cell | 1.34e-21 | 48 |
phagocyte | 1.34e-21 | 48 |
monopoietic cell | 9.55e-19 | 59 |
monocyte | 9.55e-19 | 59 |
monoblast | 9.55e-19 | 59 |
promonocyte | 9.55e-19 | 59 |
myeloid leukocyte | 1.72e-18 | 72 |
hematopoietic stem cell | 5.55e-17 | 168 |
myeloid lineage restricted progenitor cell | 2.43e-16 | 66 |
hematopoietic cell | 9.25e-16 | 177 |
leukocyte | 6.83e-15 | 136 |
hematopoietic oligopotent progenitor cell | 5.57e-14 | 161 |
hematopoietic multipotent progenitor cell | 5.57e-14 | 161 |
plasmacytoid dendritic cell | 2.71e-13 | 3 |
hematopoietic lineage restricted progenitor cell | 1.20e-10 | 120 |
CD1a-positive Langerhans cell | 2.29e-10 | 2 |
immature CD1a-positive Langerhans cell | 2.29e-10 | 2 |
dendritic cell | 8.55e-10 | 10 |
nongranular leukocyte | 8.40e-09 | 115 |
immature conventional dendritic cell | 1.83e-07 | 5 |
common dendritic progenitor | 1.83e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.74e-19 | 76 |
bone element | 1.03e-17 | 82 |
skeletal element | 1.03e-15 | 90 |
skeletal system | 3.46e-15 | 100 |
immune system | 4.73e-15 | 93 |
hematopoietic system | 4.85e-14 | 98 |
blood island | 4.85e-14 | 98 |
hemolymphoid system | 2.67e-12 | 108 |
brainstem | 3.35e-11 | 6 |
multi cell component structure | 2.99e-10 | 2 |
neuron projection bundle | 2.99e-10 | 2 |
neural tube | 1.81e-09 | 56 |
neural rod | 1.81e-09 | 56 |
future spinal cord | 1.81e-09 | 56 |
neural keel | 1.81e-09 | 56 |
regional part of nervous system | 1.48e-08 | 53 |
regional part of brain | 1.48e-08 | 53 |
segmental subdivision of nervous system | 6.36e-08 | 13 |
parietal lobe | 1.31e-07 | 5 |
musculoskeletal system | 3.88e-07 | 167 |
neural plate | 8.40e-07 | 82 |
presumptive neural plate | 8.40e-07 | 82 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.