FFCP PHASE1:Hg19::chr17:78717112..78717159,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=57521|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=30287|TSSclassifier=S|UniProt=Q8N122|association_with_transcript=25bp_to_AB037724_5end|coexpression_cluster_id=C496|description=CAGE_peak_2_at_RPTOR_5end|id=chr17:78717112..78717159,+|ontology_enrichment_celltype=CL:0000791!2.69e-16!18;CL:0000789!2.69e-16!18;CL:0002420!2.69e-16!18;CL:0002419!2.69e-16!18;CL:0000790!2.69e-16!18;CL:0000625!3.09e-12!11;CL:0000084!1.79e-11!25;CL:0000827!1.79e-11!25;CL:0000738!6.73e-08!140;CL:0002087!6.94e-08!119;CL:0000624!5.11e-07!6|ontology_enrichment_celltype_v019=CL:0000791;3.20e-25;18!CL:0000789;3.20e-25;18!CL:0002419;3.20e-25;18!CL:0000625;2.13e-20;11!CL:0000084;3.32e-19;25!CL:0000624;2.02e-08;6!CL:0000235;6.75e-08;6!CL:0000784;7.94e-07;3!CL:0000226;9.85e-07;3!CL:0000842;9.85e-07;3|ontology_enrichment_celltype_v019_2=CL:0000791,3.30e-25,18;CL:0000789,3.30e-25,18;CL:0002420,3.30e-25,18;CL:0002419,3.30e-25,18;CL:0000790,3.30e-25,18;CL:0000625,2.32e-20,11;CL:0000084,3.55e-19,25;CL:0000827,3.55e-19,25;CL:0002087,1.65e-10,115;CL:0000838,6.01e-10,52;CL:0000738,9.30e-10,136;CL:0000542,1.16e-09,53;CL:0000051,1.16e-09,53;CL:0000624,1.93e-08,6;CL:0000235,9.67e-08,6;CL:0002031,1.89e-07,120;CL:0000784,5.97e-07,3;CL:0000037,9.43e-07,168|ontology_enrichment_development_v019=CL:0000790;3.20e-25;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!5.53e-20!115;UBERON:0002780!2.50e-08!41;UBERON:0001890!2.50e-08!41;UBERON:0006240!2.50e-08!41;UBERON:0003080!5.74e-08!42;UBERON:0000178!7.23e-08!15;UBERON:0000179!7.23e-08!15;UBERON:0000463!7.23e-08!15;UBERON:0002390!9.40e-08!102;UBERON:0003061!9.40e-08!102;UBERON:0001869!1.44e-07!32;UBERON:0001893!1.52e-07!34;UBERON:0001049!3.30e-07!57;UBERON:0005068!3.30e-07!57;UBERON:0006241!3.30e-07!57;UBERON:0007135!3.30e-07!57;UBERON:0002193!3.68e-07!112;UBERON:0002791!5.08e-07!33;UBERON:0002619!8.77e-07!22|ontology_enrichment_uberon_v019=UBERON:0000178;6.73e-14;15!UBERON:0000179;6.73e-14;15!UBERON:0000463;6.73e-14;15!UBERON:0002390;4.19e-11;32!UBERON:0001869;7.53e-09;32!UBERON:0002619;1.64e-08;22!UBERON:0001893;2.42e-08;34!UBERON:0002791;3.92e-08;32!UBERON:0001950;5.04e-08;20!UBERON:0002193;8.53e-08;42!UBERON:0003528;2.36e-07;34!UBERON:0002020;2.36e-07;34!UBERON:0000956;3.11e-07;25!UBERON:0000203;3.11e-07;25!UBERON:0002780;4.18e-07;41!UBERON:0001890;4.18e-07;41!UBERON:0004177;7.70e-07;5!UBERON:0005057;7.70e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.92e-14,15;UBERON:0000179,5.92e-14,15;UBERON:0000463,5.92e-14,15;UBERON:0007023,4.94e-12,114;UBERON:0001869,5.35e-10,32;UBERON:0002780,3.12e-09,41;UBERON:0001890,3.12e-09,41;UBERON:0003080,3.12e-09,41;UBERON:0006240,3.12e-09,41;UBERON:0001893,3.31e-09,34;UBERON:0002791,9.47e-09,32;UBERON:0002619,1.80e-08,22;UBERON:0002193,2.57e-08,108;UBERON:0002390,2.87e-08,98;UBERON:0003061,2.87e-08,98;UBERON:0003528,4.74e-08,34;UBERON:0002020,4.74e-08,34;UBERON:0001950,4.96e-08,20;UBERON:0000956,3.37e-07,25;UBERON:0000203,3.37e-07,25;UBERON:0004177,3.90e-07,7;UBERON:0005057,3.90e-07,7|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.309632246632152,0,0,0,0,0,0,1.10799081706375,1.20326668482085,1.73608696572681,1.79132379391939,1.6194683300949,1.28787783817093,0.290796477559129,0,0,0,0.822335776043652,0,0,0.256160706529101,0.236482229888585,0.344745680736619,0,0,0,0.272906150057846,0,0.306083892370903,0.641858054152187,0,0,0,0,0,0,0,0.251248665256743,0.521482918420201,0.217188844705117,0,0,0,0,0,0,0.112328631146495,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,10.0321982758055,4.71612915298998,5.75684197198626,25.0779743086017,1.30368906653436,2.36723902867367,0,10.918224774747,0.589211814949674,0.886135578334485,3.5204502289452,5.76410938765538,12.6157567133082,15.7860388419529,23.2134014940113,31.5885363451207,18.2392472689334,17.1226129977416,18.8163942848958,18.6960415450984,4.98186641682498,2.74901956386104,5.06039384039006,4.14135038621326,3.25541726928209,2.85135613334512,6.17357988218868,7.16725022464743,11.2437653897111,7.34009481336452,3.28451198768419,2.82249440514625,1.33720097891754,3.47578569318718,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.327447688744282,0,0,0,0,0.26591592103773,13.5939655854045,1.71598473234038,7.80060752792086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.11616199758833,2.85235910772225,1.49448680551801,0.117434498643765,0.647491777472526,0.702254033511242,4.49139176760765,0,1.44656093646072,0,0,0,0,0.505008341862199,0.250237039743928,5.26421819419948,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0.252433774244115,0.276149695926898,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,5.73902029239046,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.18568910348575,0.234004265139238,1.18904929830983,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=57521 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30287 | |||
|TSSclassifier=S | |||
|UniProt=Q8N122 | |||
|association_with_transcript=25bp_to_AB037724_5end | |||
|coexpression_cluster_id=C496 | |||
|description=CAGE_peak_2_at_RPTOR_5end | |||
|id=chr17:78717112..78717159,+ | |||
|ontology_enrichment_celltype=CL:0000791!2.69e-16!18;CL:0000789!2.69e-16!18;CL:0002420!2.69e-16!18;CL:0002419!2.69e-16!18;CL:0000790!2.69e-16!18;CL:0000625!3.09e-12!11;CL:0000084!1.79e-11!25;CL:0000827!1.79e-11!25;CL:0000738!6.73e-08!140;CL:0002087!6.94e-08!119;CL:0000624!5.11e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.20e-25;18!CL:0000789;3.20e-25;18!CL:0002419;3.20e-25;18!CL:0000625;2.13e-20;11!CL:0000084;3.32e-19;25!CL:0000624;2.02e-08;6!CL:0000235;6.75e-08;6!CL:0000784;7.94e-07;3!CL:0000226;9.85e-07;3!CL:0000842;9.85e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.30e-25,18;CL:0000789,3.30e-25,18;CL:0002420,3.30e-25,18;CL:0002419,3.30e-25,18;CL:0000790,3.30e-25,18;CL:0000625,2.32e-20,11;CL:0000084,3.55e-19,25;CL:0000827,3.55e-19,25;CL:0002087,1.65e-10,115;CL:0000838,6.01e-10,52;CL:0000738,9.30e-10,136;CL:0000542,1.16e-09,53;CL:0000051,1.16e-09,53;CL:0000624,1.93e-08,6;CL:0000235,9.67e-08,6;CL:0002031,1.89e-07,120;CL:0000784,5.97e-07,3;CL:0000037,9.43e-07,168 | |||
|ontology_enrichment_development_v019=CL:0000790;3.20e-25;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.53e-20!115;UBERON:0002780!2.50e-08!41;UBERON:0001890!2.50e-08!41;UBERON:0006240!2.50e-08!41;UBERON:0003080!5.74e-08!42;UBERON:0000178!7.23e-08!15;UBERON:0000179!7.23e-08!15;UBERON:0000463!7.23e-08!15;UBERON:0002390!9.40e-08!102;UBERON:0003061!9.40e-08!102;UBERON:0001869!1.44e-07!32;UBERON:0001893!1.52e-07!34;UBERON:0001049!3.30e-07!57;UBERON:0005068!3.30e-07!57;UBERON:0006241!3.30e-07!57;UBERON:0007135!3.30e-07!57;UBERON:0002193!3.68e-07!112;UBERON:0002791!5.08e-07!33;UBERON:0002619!8.77e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.73e-14;15!UBERON:0000179;6.73e-14;15!UBERON:0000463;6.73e-14;15!UBERON:0002390;4.19e-11;32!UBERON:0001869;7.53e-09;32!UBERON:0002619;1.64e-08;22!UBERON:0001893;2.42e-08;34!UBERON:0002791;3.92e-08;32!UBERON:0001950;5.04e-08;20!UBERON:0002193;8.53e-08;42!UBERON:0003528;2.36e-07;34!UBERON:0002020;2.36e-07;34!UBERON:0000956;3.11e-07;25!UBERON:0000203;3.11e-07;25!UBERON:0002780;4.18e-07;41!UBERON:0001890;4.18e-07;41!UBERON:0004177;7.70e-07;5!UBERON:0005057;7.70e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.92e-14,15;UBERON:0000179,5.92e-14,15;UBERON:0000463,5.92e-14,15;UBERON:0007023,4.94e-12,114;UBERON:0001869,5.35e-10,32;UBERON:0002780,3.12e-09,41;UBERON:0001890,3.12e-09,41;UBERON:0003080,3.12e-09,41;UBERON:0006240,3.12e-09,41;UBERON:0001893,3.31e-09,34;UBERON:0002791,9.47e-09,32;UBERON:0002619,1.80e-08,22;UBERON:0002193,2.57e-08,108;UBERON:0002390,2.87e-08,98;UBERON:0003061,2.87e-08,98;UBERON:0003528,4.74e-08,34;UBERON:0002020,4.74e-08,34;UBERON:0001950,4.96e-08,20;UBERON:0000956,3.37e-07,25;UBERON:0000203,3.37e-07,25;UBERON:0004177,3.90e-07,7;UBERON:0005057,3.90e-07,7 | |||
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| |||
|short_description=p2@RPTOR | |||
}} |
Revision as of 16:20, 11 September 2013
Short description: | p2@RPTOR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_RPTOR_5end |
Coexpression cluster: | C496_thymus_CD4_CD8_hairy_vein_chronic_Peripheral |
Association with transcript: | 25bp_to_AB037724_5end |
EntrezGene: | RPTOR |
HGNC: | 30287 |
UniProt: | Q8N122 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.30e-25 | 18 |
alpha-beta T cell | 3.30e-25 | 18 |
immature T cell | 3.30e-25 | 18 |
mature T cell | 3.30e-25 | 18 |
immature alpha-beta T cell | 3.30e-25 | 18 |
CD8-positive, alpha-beta T cell | 2.32e-20 | 11 |
T cell | 3.55e-19 | 25 |
pro-T cell | 3.55e-19 | 25 |
nongranular leukocyte | 1.65e-10 | 115 |
lymphoid lineage restricted progenitor cell | 6.01e-10 | 52 |
leukocyte | 9.30e-10 | 136 |
lymphocyte | 1.16e-09 | 53 |
common lymphoid progenitor | 1.16e-09 | 53 |
CD4-positive, alpha-beta T cell | 1.93e-08 | 6 |
macrophage | 9.67e-08 | 6 |
hematopoietic lineage restricted progenitor cell | 1.89e-07 | 120 |
plasmacytoid dendritic cell | 5.97e-07 | 3 |
hematopoietic stem cell | 9.43e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
blood | 5.92e-14 | 15 |
haemolymphatic fluid | 5.92e-14 | 15 |
organism substance | 5.92e-14 | 15 |
adult organism | 4.94e-12 | 114 |
cerebral hemisphere | 5.35e-10 | 32 |
regional part of forebrain | 3.12e-09 | 41 |
forebrain | 3.12e-09 | 41 |
anterior neural tube | 3.12e-09 | 41 |
future forebrain | 3.12e-09 | 41 |
telencephalon | 3.31e-09 | 34 |
regional part of telencephalon | 9.47e-09 | 32 |
regional part of cerebral cortex | 1.80e-08 | 22 |
hemolymphoid system | 2.57e-08 | 108 |
hematopoietic system | 2.87e-08 | 98 |
blood island | 2.87e-08 | 98 |
brain grey matter | 4.74e-08 | 34 |
gray matter | 4.74e-08 | 34 |
neocortex | 4.96e-08 | 20 |
cerebral cortex | 3.37e-07 | 25 |
pallium | 3.37e-07 | 25 |
hemopoietic organ | 3.90e-07 | 7 |
immune organ | 3.90e-07 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.