FFCP PHASE1:Hg19::chr17:76677122..76677151,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9267|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9501|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000479122_5end|coexpression_cluster_id=C3692|description=CAGE_peak_8_at_CYTH1_5end|id=chr17:76677122..76677151,-|ontology_enrichment_celltype=CL:0000077!3.75e-10!19;CL:0000066!1.55e-08!254;CL:0000548!6.16e-07!679;CL:0000004!6.16e-07!679;CL:0000255!6.16e-07!679;CL:1000449!7.59e-07!16|ontology_enrichment_celltype_v019=CL:0000349;9.41e-19;19!CL:0002577;2.46e-09;3!CL:0002541;4.82e-09;3!CL:0000077;5.00e-08;19!CL:1000449;1.28e-07;15!CL:0002536;5.69e-07;2|ontology_enrichment_celltype_v019_2=CL:0000349,1.26e-18,19;CL:0002577,3.12e-09,3;CL:0002541,7.07e-09,3;CL:0000077,4.67e-08,19;CL:0000066,5.97e-08,253;CL:1000449,1.03e-07,15;CL:0002536,5.31e-07,2|ontology_enrichment_development_v019=UBERON:0008947;2.32e-08;29|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001737!2.39e-12!9;UBERON:0003886!2.47e-11!63;UBERON:0005631!2.43e-09!14;UBERON:0000158!2.43e-09!14;UBERON:0002553!3.63e-09!70;UBERON:0003124!6.23e-09!7;UBERON:0000478!2.35e-07!24;UBERON:0000464!3.10e-07!104;UBERON:0002323!7.54e-07!46;UBERON:0004211!7.59e-07!16;UBERON:0001285!7.59e-07!16;UBERON:0007684!7.59e-07!16;UBERON:0003220!7.59e-07!16;UBERON:0004208!7.59e-07!16;UBERON:0000466!9.32e-07!126|ontology_enrichment_uberon_v019=UBERON:0001737;3.20e-26;9!UBERON:0001557;3.20e-26;9!UBERON:0000478;1.21e-16;24!UBERON:0001987;2.01e-11;4!UBERON:0005631;1.10e-09;10!UBERON:0000158;1.10e-09;10!UBERON:0003124;4.82e-09;3!UBERON:0000920;4.82e-09;3!UBERON:0006555;1.28e-07;15!UBERON:0004819;1.28e-07;15!UBERON:0001285;1.28e-07;15!UBERON:0007684;1.28e-07;15|ontology_enrichment_uberon_v019_2=UBERON:0001737,3.10e-26,9;UBERON:0003124,2.08e-18,7;UBERON:0005631,6.18e-18,14;UBERON:0000158,6.18e-18,14;UBERON:0000478,1.71e-16,24;UBERON:0001557,2.40e-11,19;UBERON:0001987,3.10e-11,4;UBERON:0004340,3.10e-11,4;UBERON:0000920,7.07e-09,3;UBERON:0004211,1.03e-07,15;UBERON:0009773,1.03e-07,15;UBERON:0001231,1.03e-07,15;UBERON:0001285,1.03e-07,15;UBERON:0007684,1.03e-07,15;UBERON:0004208,1.03e-07,15;UBERON:0003886,2.32e-07,54;UBERON:0006555,3.63e-07,16;UBERON:0004819,3.63e-07,16|phase1_expression=1.09007027562334,0.214100523890983,0.845726424575827,0,0,0.872338524100369,0,0,0,0,0,5.46103430325431,8.44054330331051,0,0,0,1.20538905604795,0.730310090387373,0,0.123121058076788,0.408001382488506,0.313454721478088,0,0,0.376627918784408,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,1.35426486594342,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0.473447805734733,0,0,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.132409180813219,0.286836620748814,0,0,1.06748995729705,0.24666754841716,0,0.134710672069688,0,0.151357427644931,2.88087962239999,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0.0920498986422993,0,0,0.10075209822764,0,0,0.545492241181669,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,15.8531112053391,13.31819051617,11.3275184045237,16.8749778280563,16.1230788628381,17.3207551951101,7.9550471814497,6.67152981426177,6.15595451114225,0,2.80483547606892,0,1.47008711385542,0,0,0,0,0,0,0.219500570817251,0,0.703702806881416,0.0925884451585296,0,0,0,0,2.81780866165972,0,0,0,0,0,0,0,0,0,8.23112428174412,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,2.67351481028641,0,0,0.448524337381443,1.30788020649984,0.36669142910475,5.17086863031111,0,0,0,0,0,0,0,0.142977993658148,0,3.29296134712308,0.65147236858747,0.355391948742546,1.58390374586686,0.904318131178758,0.871533458600294,0.699810938274399,0,0,0,0,0,0,0.868687840005475,0.205476322550383,1.61154866915906,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0.207970861530807,0,0.473107245101804,0,0,0,0,0,0,0,0,0,0,0,0,2.12189300012382,8.32177197552485,5.14063498660456,0.248107807818777,0.767309866440312,1.12264037773229,1.28139149255701,1.02341449813341,0.321707842287215,0,0,0,0,0,0,0.120859449591622,0.40101294060657,0,0,0,0,0.902399225814824,0.308061348417659,1.56869953835371,1.46139224653261,0.949964660035881,0,0,5.18198198645135,1.54227252690289,2.43851793789468,4.01351819083883,0,0,1.56712328305525,0,0,0,0,0,0,0,0,0.574265537996172,1.95018073810956,0,0,0.308097234229289,0.307007349452259,0.551346289938122,0,0,0.0852266274161009,0.623224249527161,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0.38126038784765,0,0.42793898803392,0,0.78494864019923,0,0,0,0,0,0,2.43816869544795,0,0,0,0,0,0,0,0,0,0,0.811641507850816,0,0.563391205064483,0.286822704408103,0.392996164052485,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9267 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9501 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000479122_5end | |||
|coexpression_cluster_id=C3692 | |||
|description=CAGE_peak_8_at_CYTH1_5end | |||
|id=chr17:76677122..76677151,- | |||
|ontology_enrichment_celltype=CL:0000077!3.75e-10!19;CL:0000066!1.55e-08!254;CL:0000548!6.16e-07!679;CL:0000004!6.16e-07!679;CL:0000255!6.16e-07!679;CL:1000449!7.59e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000349;9.41e-19;19!CL:0002577;2.46e-09;3!CL:0002541;4.82e-09;3!CL:0000077;5.00e-08;19!CL:1000449;1.28e-07;15!CL:0002536;5.69e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.26e-18,19;CL:0002577,3.12e-09,3;CL:0002541,7.07e-09,3;CL:0000077,4.67e-08,19;CL:0000066,5.97e-08,253;CL:1000449,1.03e-07,15;CL:0002536,5.31e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.32e-08;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!2.39e-12!9;UBERON:0003886!2.47e-11!63;UBERON:0005631!2.43e-09!14;UBERON:0000158!2.43e-09!14;UBERON:0002553!3.63e-09!70;UBERON:0003124!6.23e-09!7;UBERON:0000478!2.35e-07!24;UBERON:0000464!3.10e-07!104;UBERON:0002323!7.54e-07!46;UBERON:0004211!7.59e-07!16;UBERON:0001285!7.59e-07!16;UBERON:0007684!7.59e-07!16;UBERON:0003220!7.59e-07!16;UBERON:0004208!7.59e-07!16;UBERON:0000466!9.32e-07!126 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.20e-26;9!UBERON:0001557;3.20e-26;9!UBERON:0000478;1.21e-16;24!UBERON:0001987;2.01e-11;4!UBERON:0005631;1.10e-09;10!UBERON:0000158;1.10e-09;10!UBERON:0003124;4.82e-09;3!UBERON:0000920;4.82e-09;3!UBERON:0006555;1.28e-07;15!UBERON:0004819;1.28e-07;15!UBERON:0001285;1.28e-07;15!UBERON:0007684;1.28e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,3.10e-26,9;UBERON:0003124,2.08e-18,7;UBERON:0005631,6.18e-18,14;UBERON:0000158,6.18e-18,14;UBERON:0000478,1.71e-16,24;UBERON:0001557,2.40e-11,19;UBERON:0001987,3.10e-11,4;UBERON:0004340,3.10e-11,4;UBERON:0000920,7.07e-09,3;UBERON:0004211,1.03e-07,15;UBERON:0009773,1.03e-07,15;UBERON:0001231,1.03e-07,15;UBERON:0001285,1.03e-07,15;UBERON:0007684,1.03e-07,15;UBERON:0004208,1.03e-07,15;UBERON:0003886,2.32e-07,54;UBERON:0006555,3.63e-07,16;UBERON:0004819,3.63e-07,16 | |||
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| |||
|short_description=p8@CYTH1 | |||
}} |
Revision as of 16:07, 11 September 2013
Short description: | p8@CYTH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_CYTH1_5end |
Coexpression cluster: | C3692_chorionic_Hep2_lens_embryonic_Placental_choriocarcinoma_mesothelioma |
Association with transcript: | 0bp_to_ENST00000479122_5end |
EntrezGene: | CYTH1 |
HGNC: | 9501 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.26e-18 | 19 |
placental epithelial cell | 3.12e-09 | 3 |
chorionic membrane mesenchymal stem cell | 7.07e-09 | 3 |
mesothelial cell | 4.67e-08 | 19 |
epithelial cell | 5.97e-08 | 253 |
epithelial cell of nephron | 1.03e-07 | 15 |
amniotic epithelial cell | 5.31e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
larynx | 3.10e-26 | 9 |
chorion | 2.08e-18 | 7 |
extraembryonic membrane | 6.18e-18 | 14 |
membranous layer | 6.18e-18 | 14 |
extraembryonic structure | 1.71e-16 | 24 |
upper respiratory tract | 2.40e-11 | 19 |
placenta | 3.10e-11 | 4 |
allantois | 3.10e-11 | 4 |
egg chorion | 7.07e-09 | 3 |
nephron epithelium | 1.03e-07 | 15 |
renal tubule | 1.03e-07 | 15 |
nephron tubule | 1.03e-07 | 15 |
nephron | 1.03e-07 | 15 |
uriniferous tubule | 1.03e-07 | 15 |
nephrogenic mesenchyme | 1.03e-07 | 15 |
body cavity precursor | 2.32e-07 | 54 |
excretory tube | 3.63e-07 | 16 |
kidney epithelium | 3.63e-07 | 16 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.