FFCP PHASE1:Hg19::chr17:73871841..73871861,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:73871841..73871861,-|id=chr17:73871841..73871861,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000650;2.74e-12;2!CL:1000500;2.74e-12;2!CL:1000618;2.74e-12;2!CL:1001318;2.74e-12;2!CL:0002173;2.74e-12;2!CL:0000322;1.26e-08;3!CL:0002586;1.26e-08;3!CL:0000669;8.85e-07;4!CL:0000149;8.85e-07;4|ontology_enrichment_celltype_v019_2=CL:0000650,3.62e-12,2;CL:1000500,3.62e-12,2;CL:1000618,3.62e-12,2;CL:1001318,3.62e-12,2;CL:0002173,3.62e-12,2;CL:0002586,1.21e-08,3;CL:0000322,1.40e-08,3;CL:0000149,8.61e-07,4|ontology_enrichment_development_v019=UBERON:0000358;1.49e-23;1!UBERON:0006242;3.67e-23;1|ontology_enrichment_disease=DOID:305!8.50e-10!106|ontology_enrichment_disease_v019=DOID:4468;1.75e-12;2!DOID:3910;2.74e-12;2|ontology_enrichment_disease_v019_2=DOID:4468,1.65e-12,2;DOID:3910,3.24e-12,2|ontology_enrichment_uberon=UBERON:0005743!4.79e-14!86;UBERON:0001017!6.72e-12!82;UBERON:0000073!7.76e-12!94;UBERON:0001016!7.76e-12!94;UBERON:0007023!1.11e-11!115;UBERON:0000955!5.19e-10!69;UBERON:0006238!5.19e-10!69;UBERON:0001049!2.00e-09!57;UBERON:0005068!2.00e-09!57;UBERON:0006241!2.00e-09!57;UBERON:0007135!2.00e-09!57;UBERON:0003075!1.34e-08!86;UBERON:0007284!1.34e-08!86;UBERON:0002020!5.43e-08!34;UBERON:0003528!5.43e-08!34;UBERON:0002294!6.33e-08!7;UBERON:0001173!6.33e-08!7;UBERON:0004912!6.33e-08!7;UBERON:0002346!6.71e-08!90;UBERON:0000033!9.53e-08!123;UBERON:0004121!3.12e-07!169;UBERON:0002791!4.26e-07!33;UBERON:0002616!5.11e-07!59;UBERON:0000062!5.31e-07!511;UBERON:0000153!5.33e-07!129;UBERON:0007811!5.33e-07!129;UBERON:0000924!7.75e-07!173;UBERON:0006601!7.75e-07!173;UBERON:0002780!7.78e-07!41;UBERON:0001890!7.78e-07!41;UBERON:0006240!7.78e-07!41;UBERON:0001893!8.52e-07!34|ontology_enrichment_uberon_v019=UBERON:0004903;2.74e-12;2!UBERON:0003567;2.74e-12;2!UBERON:0003838;2.74e-12;2!UBERON:0003586;2.74e-12;2!UBERON:0005169;2.74e-12;2!UBERON:0002321;2.74e-12;2!UBERON:0005215;2.74e-12;2!UBERON:0002303;2.74e-12;2!UBERON:0002319;2.74e-12;2!UBERON:0002173;2.74e-12;2!UBERON:0002186;2.74e-12;2!UBERON:0002110;1.26e-08;3!UBERON:0004821;1.26e-08;3!UBERON:0007499;1.26e-08;3!UBERON:0001781;1.26e-08;3!UBERON:0003215;1.26e-08;3!UBERON:0010368;1.26e-08;3!UBERON:0009911;1.26e-08;3!UBERON:0002299;1.26e-08;3!UBERON:0001782;1.26e-08;3!UBERON:0006524;1.26e-08;3!UBERON:0008874;1.26e-08;3!UBERON:0002169;1.26e-08;3!UBERON:0004894;1.26e-08;3!UBERON:0003891;8.85e-07;4!UBERON:0009856;8.85e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0004903,3.24e-12,2;UBERON:0002173,3.24e-12,2;UBERON:0002186,3.24e-12,2;UBERON:0003567,3.62e-12,2;UBERON:0003838,3.62e-12,2;UBERON:0003586,3.62e-12,2;UBERON:0005169,3.62e-12,2;UBERON:0002321,3.62e-12,2;UBERON:0005215,3.62e-12,2;UBERON:0002303,3.62e-12,2;UBERON:0002319,3.62e-12,2;UBERON:0002110,1.12e-08,3;UBERON:0006242,1.12e-08,3;UBERON:0001782,1.21e-08,3;UBERON:0005424,1.21e-08,3;UBERON:0004821,1.40e-08,3;UBERON:0003215,1.40e-08,3;UBERON:0010368,1.40e-08,3;UBERON:0009911,1.40e-08,3;UBERON:0002299,1.40e-08,3;UBERON:0006524,1.40e-08,3;UBERON:0008874,1.40e-08,3;UBERON:0002169,1.40e-08,3;UBERON:0004894,1.40e-08,3;UBERON:0001781,8.61e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434539556882471,0,0.486634870302636,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0.0895585227028483,0.290633938513962,0,0,0,0.207328115540772,0,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.479249710983165,0,0,0,0.205476322550383,0,0,0,0,0,0.254094624222463,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0.784349769176855,0,0,0,0,0,0,0,1.00337954770971,0.764628819135115,0,0,0,0,0,0.328014645699706,1.30151357865721,0,0,0.165018999841176,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,3.1703291575668,0,0,0.0898683511473268,0.179021174675609,0,0,0,0,0,0.0927680981618513,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:73871841..73871861,- | |||
|id=chr17:73871841..73871861,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000650;2.74e-12;2!CL:1000500;2.74e-12;2!CL:1000618;2.74e-12;2!CL:1001318;2.74e-12;2!CL:0002173;2.74e-12;2!CL:0000322;1.26e-08;3!CL:0002586;1.26e-08;3!CL:0000669;8.85e-07;4!CL:0000149;8.85e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000650,3.62e-12,2;CL:1000500,3.62e-12,2;CL:1000618,3.62e-12,2;CL:1001318,3.62e-12,2;CL:0002173,3.62e-12,2;CL:0002586,1.21e-08,3;CL:0000322,1.40e-08,3;CL:0000149,8.61e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.49e-23;1!UBERON:0006242;3.67e-23;1 | |||
|ontology_enrichment_disease=DOID:305!8.50e-10!106 | |||
|ontology_enrichment_disease_v019=DOID:4468;1.75e-12;2!DOID:3910;2.74e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,1.65e-12,2;DOID:3910,3.24e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0005743!4.79e-14!86;UBERON:0001017!6.72e-12!82;UBERON:0000073!7.76e-12!94;UBERON:0001016!7.76e-12!94;UBERON:0007023!1.11e-11!115;UBERON:0000955!5.19e-10!69;UBERON:0006238!5.19e-10!69;UBERON:0001049!2.00e-09!57;UBERON:0005068!2.00e-09!57;UBERON:0006241!2.00e-09!57;UBERON:0007135!2.00e-09!57;UBERON:0003075!1.34e-08!86;UBERON:0007284!1.34e-08!86;UBERON:0002020!5.43e-08!34;UBERON:0003528!5.43e-08!34;UBERON:0002294!6.33e-08!7;UBERON:0001173!6.33e-08!7;UBERON:0004912!6.33e-08!7;UBERON:0002346!6.71e-08!90;UBERON:0000033!9.53e-08!123;UBERON:0004121!3.12e-07!169;UBERON:0002791!4.26e-07!33;UBERON:0002616!5.11e-07!59;UBERON:0000062!5.31e-07!511;UBERON:0000153!5.33e-07!129;UBERON:0007811!5.33e-07!129;UBERON:0000924!7.75e-07!173;UBERON:0006601!7.75e-07!173;UBERON:0002780!7.78e-07!41;UBERON:0001890!7.78e-07!41;UBERON:0006240!7.78e-07!41;UBERON:0001893!8.52e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;2.74e-12;2!UBERON:0003567;2.74e-12;2!UBERON:0003838;2.74e-12;2!UBERON:0003586;2.74e-12;2!UBERON:0005169;2.74e-12;2!UBERON:0002321;2.74e-12;2!UBERON:0005215;2.74e-12;2!UBERON:0002303;2.74e-12;2!UBERON:0002319;2.74e-12;2!UBERON:0002173;2.74e-12;2!UBERON:0002186;2.74e-12;2!UBERON:0002110;1.26e-08;3!UBERON:0004821;1.26e-08;3!UBERON:0007499;1.26e-08;3!UBERON:0001781;1.26e-08;3!UBERON:0003215;1.26e-08;3!UBERON:0010368;1.26e-08;3!UBERON:0009911;1.26e-08;3!UBERON:0002299;1.26e-08;3!UBERON:0001782;1.26e-08;3!UBERON:0006524;1.26e-08;3!UBERON:0008874;1.26e-08;3!UBERON:0002169;1.26e-08;3!UBERON:0004894;1.26e-08;3!UBERON:0003891;8.85e-07;4!UBERON:0009856;8.85e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,3.24e-12,2;UBERON:0002173,3.24e-12,2;UBERON:0002186,3.24e-12,2;UBERON:0003567,3.62e-12,2;UBERON:0003838,3.62e-12,2;UBERON:0003586,3.62e-12,2;UBERON:0005169,3.62e-12,2;UBERON:0002321,3.62e-12,2;UBERON:0005215,3.62e-12,2;UBERON:0002303,3.62e-12,2;UBERON:0002319,3.62e-12,2;UBERON:0002110,1.12e-08,3;UBERON:0006242,1.12e-08,3;UBERON:0001782,1.21e-08,3;UBERON:0005424,1.21e-08,3;UBERON:0004821,1.40e-08,3;UBERON:0003215,1.40e-08,3;UBERON:0010368,1.40e-08,3;UBERON:0009911,1.40e-08,3;UBERON:0002299,1.40e-08,3;UBERON:0006524,1.40e-08,3;UBERON:0008874,1.40e-08,3;UBERON:0002169,1.40e-08,3;UBERON:0004894,1.40e-08,3;UBERON:0001781,8.61e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434539556882471,0,0.486634870302636,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0.0895585227028483,0.290633938513962,0,0,0,0.207328115540772,0,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.479249710983165,0,0,0,0.205476322550383,0,0,0,0,0,0.254094624222463,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0.784349769176855,0,0,0,0,0,0,0,1.00337954770971,0.764628819135115,0,0,0,0,0,0.328014645699706,1.30151357865721,0,0,0.165018999841176,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,3.1703291575668,0,0,0.0898683511473268,0.179021174675609,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,1.01701460117107,0.236387681767936,0,0,0,0,0.241192877250816,0,0,0,0.219385397153973,0.21787692703798,0.278847488557207,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.77495773870551,0,0,0,0,0,0,0,0,0.202203398942031,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0.0979923974143777,0,0.17472666824203,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0.240476460754601,1.49417096317547,0.19980960958213,0,0,0,0,0.124252535565433,0.942776138467182,0.543616824294456,0.104602846312333,0.203996435272644,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0.223171457441873,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.104909176269996,0,0.717149357331379,0.767660789277781,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.26446520348538,0,0.704815022316672,0.213574825135389,0,0,0,0,0,1.91502377331055,0,0,0,0,0,0,0,0.250381861413,0,0.110929051536852,0.0620964029413835,0,0.249960815924213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0.438568099157414,0,0.771656153083659,0.168942440653073,0,0,0,0,0,0,0,0,0.983091635014877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.478901577171454,0.205116364240755,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0.655087670040387,0.147856086217045,0,0,0.413373593002368,0.0634158101939068,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0.514464028312255,0.0679697329768317,0.131545547125698,0.945550727071746,0,0.078493092850514,0,0,0,0.647782773655864,0,0.142953088353313,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0.68732060563215,1.24082554265728,0,0,0.098150233615243,0.731507549893617,0,0,0,0,0,0.397901550322736,0,0,0,0,0.0771741581079447,0,0.470317296361523,0,0,0.196308467114945,0.891139200981258,0,0,0.0939839179798536,0,0,0,0,0.481448200135009,0.730336388246517,0,0.286679166302903,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0.103432995861895,0,0,0,0,0.112131862580613,0.0636471582781649,0,0.435433495793923,0.342233301085281,0,0.286888821570705,0,0,0.106727345877715,0,0,2.34640942403454,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr17:73871841..73871861,- | |||
}} |
Revision as of 15:43, 11 September 2013
Short description: | p@chr17:73871841..73871861, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:73871841..73871861, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesangial cell | 3.62e-12 | 2 |
kidney interstitial cell | 3.62e-12 | 2 |
juxtaglomerular complex cell | 3.62e-12 | 2 |
renal interstitial pericyte | 3.62e-12 | 2 |
extraglomerular mesangial cell | 3.62e-12 | 2 |
retinal pigment epithelial cell | 1.21e-08 | 3 |
pneumocyte | 1.40e-08 | 3 |
visual pigment cell | 8.61e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 3.24e-12 | 2 |
alveolar duct | 3.24e-12 | 2 |
bronchiole | 3.24e-12 | 2 |
abdomen connective tissue | 3.62e-12 | 2 |
abdominal segment connective tissue | 3.62e-12 | 2 |
trunk connective tissue | 3.62e-12 | 2 |
interstitial tissue | 3.62e-12 | 2 |
extraglomerular mesangium | 3.62e-12 | 2 |
kidney interstitium | 3.62e-12 | 2 |
juxtaglomerular apparatus | 3.62e-12 | 2 |
mesangium | 3.62e-12 | 2 |
gallbladder | 1.12e-08 | 3 |
gall bladder primordium | 1.12e-08 | 3 |
pigmented layer of retina | 1.21e-08 | 3 |
presumptive retinal pigmented epithelium | 1.21e-08 | 3 |
pulmonary alveolus epithelium | 1.40e-08 | 3 |
alveolus | 1.40e-08 | 3 |
pulmonary lobule | 1.40e-08 | 3 |
lobule | 1.40e-08 | 3 |
alveolus of lung | 1.40e-08 | 3 |
alveolar system | 1.40e-08 | 3 |
pulmonary acinus | 1.40e-08 | 3 |
alveolar sac | 1.40e-08 | 3 |
alveolar wall | 1.40e-08 | 3 |
layer of retina | 8.61e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 1.65e-12 | 2 |
lung adenocarcinoma | 3.24e-12 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.