FFCP PHASE1:Hg19::chr17:48263316..48263349,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C59|description=CAGE_peak_at_chr17:48263316..48263349,+|id=chr17:48263316..48263349,+|ontology_enrichment_celltype=CL:0000055!9.77e-27!180;CL:0000057!1.45e-23!75;CL:0000048!6.65e-12!430;CL:0000723!3.96e-11!436;CL:0000034!1.04e-10!444;CL:0002334!1.22e-09!12;CL:0002371!2.25e-09!591;CL:0002320!2.72e-09!365;CL:0000183!3.17e-08!59;CL:0000144!7.23e-08!625;CL:0000134!1.19e-07!358;CL:0002570!2.18e-07!8;CL:0002620!3.47e-07!23;CL:0000187!5.09e-07!54;CL:0000680!8.45e-07!57;CL:0000056!8.45e-07!57;CL:0000355!8.45e-07!57|ontology_enrichment_celltype_v019=CL:0002334;3.17e-12;12!CL:0000134;3.98e-11;55!CL:0002570;1.81e-10;8!CL:0002569;1.76e-09;6!CL:0000048;2.01e-09;58!CL:0000723;3.72e-08;61!CL:0000349;2.03e-07;19!CL:0000499;3.78e-07;28!CL:0002320;4.05e-07;188!CL:0000034;7.38e-07;69!CL:0000057;9.29e-07;73|ontology_enrichment_celltype_v019_2=CL:0000057,6.15e-18,76;CL:0000048,2.43e-13,427;CL:0000723,9.29e-13,433;CL:0002334,3.83e-12,12;CL:0000034,5.21e-12,441;CL:0002570,1.64e-10,8;CL:0002320,1.65e-10,361;CL:0000134,3.62e-10,354;CL:0002569,2.38e-09,6;CL:0000219,1.43e-08,386;CL:0000136,1.17e-07,15;CL:0000349,2.65e-07,19;CL:0000499,3.58e-07,28|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:2394!3.74e-07!14|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001013!2.97e-10!14;UBERON:0002384!1.43e-09!375;UBERON:0000914!3.88e-08!83;UBERON:0002329!3.88e-08!83;UBERON:0003077!3.88e-08!83;UBERON:0003059!3.88e-08!83;UBERON:0007282!3.88e-08!83;UBERON:0009618!3.88e-08!83;UBERON:0007285!3.88e-08!83;UBERON:0002199!1.98e-07!45;UBERON:0002416!1.98e-07!45;UBERON:0001134!3.20e-07!61;UBERON:0002036!3.20e-07!61;UBERON:0003082!3.20e-07!61;UBERON:0002385!3.36e-07!63;UBERON:0001015!3.36e-07!63;UBERON:0000383!3.36e-07!63;UBERON:0004290!3.63e-07!70|ontology_enrichment_uberon_v019=UBERON:0001013;9.26e-12;14!UBERON:0003104;6.03e-11;7!UBERON:0009142;6.03e-11;7!UBERON:0004457;1.48e-09;9!UBERON:0000042;1.48e-09;9!UBERON:0003422;1.76e-09;6!UBERON:0003688;1.50e-08;6!UBERON:0002358;1.50e-08;6!UBERON:0003684;1.50e-08;6!UBERON:0001178;1.50e-08;6!UBERON:0002384;6.49e-08;198!UBERON:0002331;3.43e-07;10|ontology_enrichment_uberon_v019_2=UBERON:0001013,6.38e-12,14;UBERON:0002384,1.35e-10,371;UBERON:0003422,2.38e-09,6;UBERON:0003688,1.65e-08,6;UBERON:0002358,1.65e-08,6;UBERON:0003684,1.65e-08,6;UBERON:0001178,1.65e-08,6;UBERON:0002331,4.33e-07,10;UBERON:0000358,4.33e-07,10;UBERON:0000307,4.33e-07,10;UBERON:0000091,4.33e-07,10;UBERON:0000087,4.33e-07,10;UBERON:0007010,4.33e-07,10;UBERON:0007806,4.33e-07,10;UBERON:0008780,4.33e-07,10;UBERON:0005728,4.33e-07,10;UBERON:0004457,9.67e-07,12;UBERON:0000042,9.67e-07,12|phase1_expression=1.99846217197612,4.49611100171065,1.9733616573436,3.00219895059391,7.59833860526389,3.48935409640147,2.53299878168311,1.89515962028049,0.522371256399677,0.245733936501509,0,0,2.37390280405608,0.866364470720326,0.994192127183747,0.672325146451775,0,2.92124036154949,0.487932798790507,0.246242116153576,1.63200552995402,2.19418305034661,0,0,0.376627918784408,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,2.30152611318355,6.14446559053763,1.50401373190767,6.37324683427624,0,1.45990461090791,0.189069634328136,1.10864698731282,1.05401742831751,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.96971951695318,1.77282716330412,0.926864265692532,9.75244510545967,3.90135220418193,2.80338800071154,0,12.5800449692752,0.311211035399766,0.404132016209064,0.490385709340376,0.908144565869588,2.30470369792,0,0.312160076830321,0,0.298897361103602,0,0,0,0.204154171254893,0.368502951935304,0.516628905878827,5.94001428641027,6.67620709052104,0.910161361938026,2.87447256726495,0,0.250237039743928,0,0.877955241761676,3.98434134538726,2.25357088359895,1.13432183160021,5.56107870635472,1.92201649936711,2.96704661623387,7.20218630602566,0.206105058476878,4.12224864073007,1.30281799432113,2.19409231913646,0.876933046450788,3.28163906517349,1.19664868234989,0.969876340912871,11.005297368015,0.403008392910561,0.508681776931463,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,5.14592750554308,1.38134921352481,1.85747171212792,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,1.2347220339942,4.41026134156626,0,0,1.77236972004421,0,0,0.686271241194102,0,0,0,0,0,0,1.44331342025273,0.231860809950154,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308482478109971,0,0,0.112131084345361,0.43596006883328,0.4400297149257,2.06834745212444,3.57656445851882,3.381211010224,1.32969058292435,2.08014873822732,0.257207374262142,0,1.3321108950805,3.0025378668211,7.054080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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C59 | |||
|description=CAGE_peak_at_chr17:48263316..48263349,+ | |||
|id=chr17:48263316..48263349,+ | |||
|ontology_enrichment_celltype=CL:0000055!9.77e-27!180;CL:0000057!1.45e-23!75;CL:0000048!6.65e-12!430;CL:0000723!3.96e-11!436;CL:0000034!1.04e-10!444;CL:0002334!1.22e-09!12;CL:0002371!2.25e-09!591;CL:0002320!2.72e-09!365;CL:0000183!3.17e-08!59;CL:0000144!7.23e-08!625;CL:0000134!1.19e-07!358;CL:0002570!2.18e-07!8;CL:0002620!3.47e-07!23;CL:0000187!5.09e-07!54;CL:0000680!8.45e-07!57;CL:0000056!8.45e-07!57;CL:0000355!8.45e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002334;3.17e-12;12!CL:0000134;3.98e-11;55!CL:0002570;1.81e-10;8!CL:0002569;1.76e-09;6!CL:0000048;2.01e-09;58!CL:0000723;3.72e-08;61!CL:0000349;2.03e-07;19!CL:0000499;3.78e-07;28!CL:0002320;4.05e-07;188!CL:0000034;7.38e-07;69!CL:0000057;9.29e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.15e-18,76;CL:0000048,2.43e-13,427;CL:0000723,9.29e-13,433;CL:0002334,3.83e-12,12;CL:0000034,5.21e-12,441;CL:0002570,1.64e-10,8;CL:0002320,1.65e-10,361;CL:0000134,3.62e-10,354;CL:0002569,2.38e-09,6;CL:0000219,1.43e-08,386;CL:0000136,1.17e-07,15;CL:0000349,2.65e-07,19;CL:0000499,3.58e-07,28 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!3.74e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001013!2.97e-10!14;UBERON:0002384!1.43e-09!375;UBERON:0000914!3.88e-08!83;UBERON:0002329!3.88e-08!83;UBERON:0003077!3.88e-08!83;UBERON:0003059!3.88e-08!83;UBERON:0007282!3.88e-08!83;UBERON:0009618!3.88e-08!83;UBERON:0007285!3.88e-08!83;UBERON:0002199!1.98e-07!45;UBERON:0002416!1.98e-07!45;UBERON:0001134!3.20e-07!61;UBERON:0002036!3.20e-07!61;UBERON:0003082!3.20e-07!61;UBERON:0002385!3.36e-07!63;UBERON:0001015!3.36e-07!63;UBERON:0000383!3.36e-07!63;UBERON:0004290!3.63e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;9.26e-12;14!UBERON:0003104;6.03e-11;7!UBERON:0009142;6.03e-11;7!UBERON:0004457;1.48e-09;9!UBERON:0000042;1.48e-09;9!UBERON:0003422;1.76e-09;6!UBERON:0003688;1.50e-08;6!UBERON:0002358;1.50e-08;6!UBERON:0003684;1.50e-08;6!UBERON:0001178;1.50e-08;6!UBERON:0002384;6.49e-08;198!UBERON:0002331;3.43e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,6.38e-12,14;UBERON:0002384,1.35e-10,371;UBERON:0003422,2.38e-09,6;UBERON:0003688,1.65e-08,6;UBERON:0002358,1.65e-08,6;UBERON:0003684,1.65e-08,6;UBERON:0001178,1.65e-08,6;UBERON:0002331,4.33e-07,10;UBERON:0000358,4.33e-07,10;UBERON:0000307,4.33e-07,10;UBERON:0000091,4.33e-07,10;UBERON:0000087,4.33e-07,10;UBERON:0007010,4.33e-07,10;UBERON:0007806,4.33e-07,10;UBERON:0008780,4.33e-07,10;UBERON:0005728,4.33e-07,10;UBERON:0004457,9.67e-07,12;UBERON:0000042,9.67e-07,12 | |||
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| |||
|short_description=p@chr17:48263316..48263349,+ | |||
}} |
Revision as of 14:25, 11 September 2013
Short description: | p@chr17:48263316..48263349, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:48263316..48263349, + |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.15e-18 | 76 |
multi fate stem cell | 2.43e-13 | 427 |
somatic stem cell | 9.29e-13 | 433 |
preadipocyte | 3.83e-12 | 12 |
stem cell | 5.21e-12 | 441 |
mesenchymal stem cell of adipose | 1.64e-10 | 8 |
connective tissue cell | 1.65e-10 | 361 |
mesenchymal cell | 3.62e-10 | 354 |
mesenchymal stem cell of umbilical cord | 2.38e-09 | 6 |
motile cell | 1.43e-08 | 386 |
fat cell | 1.17e-07 | 15 |
extraembryonic cell | 2.65e-07 | 19 |
stromal cell | 3.58e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 6.38e-12 | 14 |
connective tissue | 1.35e-10 | 371 |
mesenchyme of umbilical cord | 2.38e-09 | 6 |
omentum | 1.65e-08 | 6 |
peritoneum | 1.65e-08 | 6 |
abdominal cavity | 1.65e-08 | 6 |
visceral peritoneum | 1.65e-08 | 6 |
umbilical cord | 4.33e-07 | 10 |
blastocyst | 4.33e-07 | 10 |
blastula | 4.33e-07 | 10 |
bilaminar disc | 4.33e-07 | 10 |
inner cell mass | 4.33e-07 | 10 |
cleaving embryo | 4.33e-07 | 10 |
connecting stalk | 4.33e-07 | 10 |
inner cell mass derived epiblast | 4.33e-07 | 10 |
extraembryonic mesoderm | 4.33e-07 | 10 |
cavity lining | 9.67e-07 | 12 |
serous membrane | 9.67e-07 | 12 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.