FFCP PHASE1:Hg19::chr17:46189327..46189378,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=29916|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14975|TSSclassifier=S|UniProt=Q9Y5W9|association_with_transcript=-27bp_to_BT006723,CU674392_5end|coexpression_cluster_id=C342|description=CAGE_peak_4_at_SNX11_5end|id=chr17:46189327..46189378,+|ontology_enrichment_celltype=CL:0000945!1.19e-45!24;CL:0000826!1.19e-45!24;CL:0000738!1.62e-29!140;CL:0000236!8.29e-28!14;CL:0002087!5.05e-26!119;CL:0000542!1.07e-24!53;CL:0000051!1.07e-24!53;CL:0002031!2.00e-24!124;CL:0000838!2.71e-23!52;CL:0000988!5.23e-23!182;CL:0002032!8.66e-22!165;CL:0000837!8.66e-22!165;CL:0000037!1.96e-21!172;CL:0000566!1.96e-21!172;CL:0000990!5.85e-12!8;CL:0000451!1.45e-09!10;CL:0000453!1.18e-07!5|ontology_enrichment_celltype_v019=CL:0000945;3.20e-90;24!CL:0000236;1.60e-49;13!CL:0000542;6.33e-29;53!CL:0002087;2.21e-09;104!CL:0000946;2.82e-07;1!CL:0000786;2.82e-07;1!CL:0000738;5.78e-07;136|ontology_enrichment_celltype_v019_2=CL:0000945,1.44e-90,24;CL:0000826,1.44e-90,24;CL:0000236,2.32e-55,14;CL:0000838,2.05e-48,52;CL:0000542,2.07e-47,53;CL:0000051,2.07e-47,53;CL:0002087,2.81e-25,115;CL:0002031,5.15e-24,120;CL:0000738,1.41e-22,136;CL:0000988,6.84e-21,177;CL:0002032,2.99e-18,161;CL:0000837,2.99e-18,161;CL:0000037,2.87e-17,168;CL:0000946,2.82e-07,1;CL:0000786,2.82e-07,1;CL:0000980,2.82e-07,1|ontology_enrichment_development_v019=CL:0000051;6.33e-29;53|ontology_enrichment_disease=DOID:0060058!3.70e-11!10|ontology_enrichment_disease_v019=DOID:0060058;2.52e-14;10!DOID:630;2.22e-07;1!DOID:0050177;2.22e-07;1!DOID:0050427;2.22e-07;1!DOID:0060060;3.08e-07;1!DOID:0060061;3.08e-07;1!DOID:8691;3.08e-07;1|ontology_enrichment_disease_v019_2=DOID:0060058,2.67e-14,10;DOID:630,2.22e-07,1;DOID:0050177,2.22e-07,1;DOID:0050427,2.22e-07,1;DOID:0060060,2.99e-07,1;DOID:0060061,2.99e-07,1;DOID:8691,2.99e-07,1|ontology_enrichment_uberon=UBERON:0002193!1.42e-13!112;UBERON:0002390!2.14e-13!102;UBERON:0003061!2.14e-13!102;UBERON:0004177!1.34e-08!7;UBERON:0000178!1.50e-08!15;UBERON:0000179!1.50e-08!15;UBERON:0000463!1.50e-08!15;UBERON:0002106!6.27e-08!3;UBERON:0004854!6.27e-08!3;UBERON:0009034!6.27e-08!3;UBERON:0002095!6.27e-08!3;UBERON:0004782!6.27e-08!3;UBERON:0003281!6.27e-08!3;UBERON:0009664!6.27e-08!3;UBERON:0002296!6.27e-08!3;UBERON:0005602!6.27e-08!3;UBERON:0001179!6.27e-08!3;UBERON:0006293!6.27e-08!3|ontology_enrichment_uberon_v019=UBERON:0002370;5.64e-12;2!UBERON:0005058;5.64e-12;2!UBERON:0009113;5.64e-12;2!UBERON:0004177;8.42e-11;5!UBERON:0005057;8.42e-11;5|ontology_enrichment_uberon_v019_2=UBERON:0004177,7.74e-08,7;UBERON:0005057,7.74e-08,7;UBERON:0002372,9.51e-07,1;UBERON:0001961,9.51e-07,1;UBERON:0001744,9.51e-07,1;UBERON:0001735,9.51e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.7579434623362,26.5184903923325,19.9138276723608,0.393364276848904,0,0.154816123316076,0,0,0,0.0774672005803016,12.6530616913805,0,0,0.401088894940283,0,0.223915474239924,0.32389366601898,0,0.145398238779565,0,0,0.232429036905685,0,0,0,0,0,0,0.645484683583826,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0.368277635987565,1.26584954976354,0,0.212604299965044,0,0.112328631146495,0,0.16072558669708,0,0,0,1.75996244461323,2.73069305631066,1.77901850772711,1.70692089026603,3.60356388332411,3.4485146397269,5.94940385506376,5.72432252721218,1.70763890732835,5.87237189370939,2.6759125968766,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0.328875809207352,0.276350017785848,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0.649094787309367,0.696518949197069,1.99436940778298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0,0.540031437238115,0.79312517629427,0.106824071127473,0,0,0.371606350251437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10513566212459,0,0,13.2931589897955,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0.611030144933625,2.6686901581256,1.60633120630454,1.56632924258183,0,0,0,0.547364367646998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.0928182968485,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43944664511834,0,0.136203406111576,0,0,0,0.449947783103001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0.992332043623902,0,9.74340787047167,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.79441235357554,0.531459361253452,0.327130788511688,0,0,0,13.7991303139902,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,14.4042484444724,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.375935671919414,0.966868319603658,51.969401080963,0,0,0,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58355639344024,1.61394257169231,0,0,0,0,0,1.68380132536469,0.0717222053926763,0,0,0,0,0,0,0,0,0,1.61019034872821,42.3150409840268|short_description=p4@SNX11}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=29916 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14975 | |||
|TSSclassifier=S | |||
|UniProt=Q9Y5W9 | |||
|association_with_transcript=-27bp_to_BT006723,CU674392_5end | |||
|coexpression_cluster_id=C342 | |||
|description=CAGE_peak_4_at_SNX11_5end | |||
|id=chr17:46189327..46189378,+ | |||
|ontology_enrichment_celltype=CL:0000945!1.19e-45!24;CL:0000826!1.19e-45!24;CL:0000738!1.62e-29!140;CL:0000236!8.29e-28!14;CL:0002087!5.05e-26!119;CL:0000542!1.07e-24!53;CL:0000051!1.07e-24!53;CL:0002031!2.00e-24!124;CL:0000838!2.71e-23!52;CL:0000988!5.23e-23!182;CL:0002032!8.66e-22!165;CL:0000837!8.66e-22!165;CL:0000037!1.96e-21!172;CL:0000566!1.96e-21!172;CL:0000990!5.85e-12!8;CL:0000451!1.45e-09!10;CL:0000453!1.18e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000945;3.20e-90;24!CL:0000236;1.60e-49;13!CL:0000542;6.33e-29;53!CL:0002087;2.21e-09;104!CL:0000946;2.82e-07;1!CL:0000786;2.82e-07;1!CL:0000738;5.78e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.44e-90,24;CL:0000826,1.44e-90,24;CL:0000236,2.32e-55,14;CL:0000838,2.05e-48,52;CL:0000542,2.07e-47,53;CL:0000051,2.07e-47,53;CL:0002087,2.81e-25,115;CL:0002031,5.15e-24,120;CL:0000738,1.41e-22,136;CL:0000988,6.84e-21,177;CL:0002032,2.99e-18,161;CL:0000837,2.99e-18,161;CL:0000037,2.87e-17,168;CL:0000946,2.82e-07,1;CL:0000786,2.82e-07,1;CL:0000980,2.82e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000051;6.33e-29;53 | |||
|ontology_enrichment_disease=DOID:0060058!3.70e-11!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;2.52e-14;10!DOID:630;2.22e-07;1!DOID:0050177;2.22e-07;1!DOID:0050427;2.22e-07;1!DOID:0060060;3.08e-07;1!DOID:0060061;3.08e-07;1!DOID:8691;3.08e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,2.67e-14,10;DOID:630,2.22e-07,1;DOID:0050177,2.22e-07,1;DOID:0050427,2.22e-07,1;DOID:0060060,2.99e-07,1;DOID:0060061,2.99e-07,1;DOID:8691,2.99e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002193!1.42e-13!112;UBERON:0002390!2.14e-13!102;UBERON:0003061!2.14e-13!102;UBERON:0004177!1.34e-08!7;UBERON:0000178!1.50e-08!15;UBERON:0000179!1.50e-08!15;UBERON:0000463!1.50e-08!15;UBERON:0002106!6.27e-08!3;UBERON:0004854!6.27e-08!3;UBERON:0009034!6.27e-08!3;UBERON:0002095!6.27e-08!3;UBERON:0004782!6.27e-08!3;UBERON:0003281!6.27e-08!3;UBERON:0009664!6.27e-08!3;UBERON:0002296!6.27e-08!3;UBERON:0005602!6.27e-08!3;UBERON:0001179!6.27e-08!3;UBERON:0006293!6.27e-08!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;5.64e-12;2!UBERON:0005058;5.64e-12;2!UBERON:0009113;5.64e-12;2!UBERON:0004177;8.42e-11;5!UBERON:0005057;8.42e-11;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,7.74e-08,7;UBERON:0005057,7.74e-08,7;UBERON:0002372,9.51e-07,1;UBERON:0001961,9.51e-07,1;UBERON:0001744,9.51e-07,1;UBERON:0001735,9.51e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.7579434623362,26.5184903923325,19.9138276723608,0.393364276848904,0,0.154816123316076,0,0,0,0.0774672005803016,12.6530616913805,0,0,0.401088894940283,0,0.223915474239924,0.32389366601898,0,0.145398238779565,0,0,0.232429036905685,0,0,0,0,0,0,0.645484683583826,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0.368277635987565,1.26584954976354,0,0.212604299965044,0,0.112328631146495,0,0.16072558669708,0,0,0,1.75996244461323,2.73069305631066,1.77901850772711,1.70692089026603,3.60356388332411,3.4485146397269,5.94940385506376,5.72432252721218,1.70763890732835,5.87237189370939,2.6759125968766,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0.328875809207352,0.276350017785848,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0.649094787309367,0.696518949197069,1.99436940778298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0,0.540031437238115,0.79312517629427,0.106824071127473,0,0,0.371606350251437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10513566212459,0,0,13.2931589897955,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0.611030144933625,2.6686901581256,1.60633120630454,1.56632924258183,0,0,0,0.547364367646998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.0928182968485,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43944664511834,0,0.136203406111576,0,0,0,0.449947783103001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0.992332043623902,0,9.74340787047167,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.79441235357554,0.531459361253452,0.327130788511688,0,0,0,13.7991303139902,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,14.4042484444724,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.375935671919414,0.966868319603658,51.969401080963,0,0,0,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58355639344024,1.61394257169231,0,0,0,0,0,1.68380132536469,0.0717222053926763,0,0,0,0,0,0,0,0,0,1.61019034872821,42.3150409840268 | |||
|short_description=p4@SNX11 | |||
}} |
Revision as of 14:12, 11 September 2013
Short description: | p4@SNX11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_SNX11_5end |
Coexpression cluster: | C342_xeroderma_b_B_splenic_plasma_Burkitt_thymus |
Association with transcript: | -27bp_to_BT006723, CU674392_5end |
EntrezGene: | SNX11 |
HGNC: | 14975 |
UniProt: | Q9Y5W9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.44e-90 | 24 |
pro-B cell | 1.44e-90 | 24 |
B cell | 2.32e-55 | 14 |
lymphoid lineage restricted progenitor cell | 2.05e-48 | 52 |
lymphocyte | 2.07e-47 | 53 |
common lymphoid progenitor | 2.07e-47 | 53 |
nongranular leukocyte | 2.81e-25 | 115 |
hematopoietic lineage restricted progenitor cell | 5.15e-24 | 120 |
leukocyte | 1.41e-22 | 136 |
hematopoietic cell | 6.84e-21 | 177 |
hematopoietic oligopotent progenitor cell | 2.99e-18 | 161 |
hematopoietic multipotent progenitor cell | 2.99e-18 | 161 |
hematopoietic stem cell | 2.87e-17 | 168 |
antibody secreting cell | 2.82e-07 | 1 |
plasma cell | 2.82e-07 | 1 |
plasmablast | 2.82e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 7.74e-08 | 7 |
immune organ | 7.74e-08 | 7 |
tonsil | 9.51e-07 | 1 |
mucosa-associated lymphoid tissue | 9.51e-07 | 1 |
lymphoid tissue | 9.51e-07 | 1 |
tonsillar ring | 9.51e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 2.67e-14 | 10 |
genetic disease | 2.22e-07 | 1 |
monogenic disease | 2.22e-07 | 1 |
xeroderma pigmentosum | 2.22e-07 | 1 |
non-Hodgkin lymphoma | 2.99e-07 | 1 |
cutaneous T cell lymphoma | 2.99e-07 | 1 |
mycosis fungoides | 2.99e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.